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Daniel Saragih

Publications and source records attributed to Daniel Saragih.

5 recordsLinked to original sources

Augmented Equivariant Mesh Networks for Anatomical Segmentation

Anatomical mesh segmentation requires models that operate directly on irregular surface geometry while remaining robust to arbitrary patient pose and mesh resolution variation. Existing task-specific mesh and point-cloud methods are not equivariant, and can degrade sharply under test-time perturbation, for example dropping by 25-26 IoU points on intraoral scan segmentation at $40^\circ$ tilt. We present EAMS, an Equivariant Anatomical Mesh Segmentor built on Equivariant Mesh Neural Networks (EMNN), and evaluate it across four clinically distinct tasks spanning edge-, vertex-, and face-level supervision. We combine intrinsic mesh descriptors with anatomy-aware priors, including PCA-derived frames for dental arches and liver surfaces, and augment message passing to provide lightweight global context. Across intracranial aneurysm and intraoral segmentation, EAMS variants are competitive with specialized baselines on unperturbed inputs while remaining stable under geometric perturbations, and on liver surfaces they expose a favorable trade-off between canonical-pose accuracy and rotation robustness. These results show that a lightweight ($<2$M parameters) equivariant framework can deliver robust anatomical mesh segmentation across diverse supervision types without task-specific architectures.

cs.CV

Flows and Diffusions on the Neural Manifold

Diffusion and flow-based generative models have achieved remarkable success in domains such as image synthesis, video generation, and natural language modeling. In this work, we extend these advances to weight space learning by leveraging recent techniques to incorporate structural priors derived from optimization dynamics. Central to our approach is modeling the trajectory induced by gradient descent as a trajectory inference problem. We unify several trajectory inference techniques towards matching a gradient flow, providing a theoretical framework for treating optimization paths as inductive bias. We further explore architectural and algorithmic choices, including reward fine-tuning by adjoint matching, the use of autoencoders for latent weight representation, conditioning on task-specific context data, and adopting informative source distributions such as Kaiming uniform. Experiments demonstrate that our method matches or surpasses baselines in generating in-distribution weights, improves initialization for downstream training, and supports fine-tuning to enhance performance. Finally, we illustrate a practical application in safety-critical systems: detecting harmful covariate shifts, where our method outperforms the closest comparable baseline.

cs.LG

Flow to Learn: Flow Matching on Neural Network Parameters

Foundational language models show a remarkable ability to learn new concepts during inference via context data. However, similar work for images lag behind. To address this challenge, we introduce FLoWN, a flow matching model that learns to generate neural network parameters for different tasks. Our approach models the flow on latent space, while conditioning the process on context data. Experiments verify that FLoWN attains various desiderata for a meta-learning model. In addition, it matches or exceeds baselines on in-distribution tasks, provides better initializations for classifier training, and is performant on out-of-distribution few-shot tasks while having a fine-tuning mechanism to improve performance.

cs.LG

An Empirical Study of Aegis

Bit flipping attacks are one class of attacks on neural networks with numerous defense mechanisms invented to mitigate its potency. Due to the importance of ensuring the robustness of these defense mechanisms, we perform an empirical study on the Aegis framework. We evaluate the baseline mechanisms of Aegis on low-entropy data (MNIST), and we evaluate a pre-trained model with the mechanisms fine-tuned on MNIST. We also compare the use of data augmentation to the robustness training of Aegis, and how Aegis performs under other adversarial attacks, such as the generation of adversarial examples. We find that both the dynamic-exit strategy and robustness training of Aegis has some drawbacks. In particular, we see drops in accuracy when testing on perturbed data, and on adversarial examples, as compared to baselines. Moreover, we found that the dynamic exit-strategy loses its uniformity when tested on simpler datasets. The code for this project is available on GitHub.

cs.LG

Using Diffusion Models to Generate Synthetic Labelled Data for Medical Image Segmentation

Medical image analysis has become a prominent area where machine learning has been applied. However, high quality, publicly available data is limited either due to patient privacy laws or the time and cost required for experts to annotate images. In this retrospective study, we designed and evaluated a pipeline to generate synthetic labeled polyp images for augmenting medical image segmentation models with the aim of reducing this data scarcity. In particular, we trained diffusion models on the HyperKvasir dataset, comprising 1000 images of polyps in the human GI tract from 2008 to 2016. Qualitative expert review, Fr\'echet Inception Distance (FID), and Multi-Scale Structural Similarity (MS-SSIM) were tested for evaluation. Additionally, various segmentation models were trained with the generated data and evaluated using Dice score and Intersection over Union. We found that our pipeline produced images more akin to real polyp images based on FID scores, and segmentation performance also showed improvements over GAN methods when trained entirely, or partially, with synthetic data, despite requiring less compute for training. Moreover, the improvement persists when tested on different datasets, showcasing the transferability of the generated images.

eess.IV