arXiv subjects

Daniel Weiskopf

Publications and source records attributed to Daniel Weiskopf.

At least 55 records · Page 3Linked to original sources

arXiv2022

Comparative Evaluation of Bipartite, Node-Link, and Matrix-Based Network Representations

This work investigates and compares the performance of node-link diagrams, adjacency matrices, and bipartite layouts for visualizing networks. In a crowd-sourced user study (n = 150), we measure the task accuracy and completion time of the three representations for different network classes and properties. In contrast to the literature, which covers mostly topology-based tasks (e.g., path finding) in small datasets, we mainly focus on overview tasks for large and directed networks. We consider three overview tasks on networks with 500 nodes: (T1) network class identification, (T2) cluster detection, and (T3) network density estimation, and two detailed tasks: (T4) node in-degree vs. out-degree and (T5) representation mapping, on networks with 50 and 20 nodes, respectively. Our results show that bipartite layouts are beneficial for revealing the overall network structure, while adjacency matrices are most reliable across the different tasks.

cs.HC↗

arXiv2022

A Spiral into the Mind: Gaze Spiral Visualization for Mobile Eye Tracking

Comparing mobile eye tracking data from multiple participants without information about areas of interest (AOIs) is challenging because of individual timing and coordinate systems. We present a technique, the gaze spiral, that visualizes individual recordings based on image content of the stimulus. The spiral layout of the slitscan visualization is used to create a compact representation of scanpaths. The visualization provides an overview of multiple recordings even for long time spans and helps identify and annotate recurring patterns within recordings. The gaze spirals can also serve as glyphs that can be projected to 2D space based on established scanpath metrics in order to interpret the metrics and identify groups of similar viewing behavior. We present examples based on two egocentric datasets to demonstrate the effectiveness of our approach for annotation and comparison tasks. Our examples show that the technique has the potential to let users compare even long-term recordings of pervasive scenarios without manual annotation.

cs.HC↗

arXiv2022

Dynamic Mode Decomposition: Theory and Data Reconstruction

Dynamic Mode Decomposition (DMD) is a data-driven decomposition technique extracting spatio-temporal patterns of time-dependent phenomena. In this paper, we perform a comprehensive theoretical analysis of various variants of DMD. We provide a systematic advancement of these and examine the interrelations. In addition, several results of each variant are proven. Our main result is the exact reconstruction property. To this end, a new modification of scaling factors is presented and a new concept of an error scaling is introduced to guarantee an error-free reconstruction of the data.

math.NA↗

arXiv2021

Age-Net: An MRI-Based Iterative Framework for Brain Biological Age Estimation

The concept of biological age (BA), although important in clinical practice, is hard to grasp mainly due to the lack of a clearly defined reference standard. For specific applications, especially in pediatrics, medical image data are used for BA estimation in a routine clinical context. Beyond this young age group, BA estimation is mostly restricted to whole-body assessment using non-imaging indicators such as blood biomarkers, genetic and cellular data. However, various organ systems may exhibit different aging characteristics due to lifestyle and genetic factors. Thus, a whole-body assessment of the BA does not reflect the deviations of aging behavior between organs. To this end, we propose a new imaging-based framework for organ-specific BA estimation. In this initial study, we focus mainly on brain MRI. As a first step, we introduce a chronological age (CA) estimation framework using deep convolutional neural networks (Age-Net). We quantitatively assess the performance of this framework in comparison to existing state-of-the-art CA estimation approaches. Furthermore, we expand upon Age-Net with a novel iterative data-cleaning algorithm to segregate atypical-aging patients (BA $\not \approx$ CA) from the given population. We hypothesize that the remaining population should approximate the true BA behavior. We apply the proposed methodology on a brain magnetic resonance image (MRI) dataset containing healthy individuals as well as Alzheimer's patients with different dementia ratings. We demonstrate the correlation between the predicted BAs and the expected cognitive deterioration in Alzheimer's patients. A statistical and visualization-based analysis has provided evidence regarding the potential and current challenges of the proposed methodology.

eess.IV↗

arXiv2021

Visualization of Nonlinear Programming for Robot Motion Planning

Nonlinear programming targets nonlinear optimization with constraints, which is a generic yet complex methodology involving humans for problem modeling and algorithms for problem solving. We address the particularly hard challenge of supporting domain experts in handling, understanding, and trouble-shooting high-dimensional optimization with a large number of constraints. Leveraging visual analytics, users are supported in exploring the computation process of nonlinear constraint optimization. Our system was designed for robot motion planning problems and developed in tight collaboration with domain experts in nonlinear programming and robotics. We report on the experiences from this design study, illustrate the usefulness for relevant example cases, and discuss the extension to visual analytics for nonlinear programming in general.

cs.RO↗

arXiv2020

Visualization and Selection of Dynamic Mode Decomposition Components for Unsteady Flow

Dynamic Mode Decomposition (DMD) is a data-driven and model-free decomposition technique. It is suitable for revealing spatio-temporal features of both numerically and experimentally acquired data. Conceptually, DMD performs a low-dimensional spectral decomposition of the data into the following components: The modes, called DMD modes, encode the spatial contribution of the decomposition, whereas the DMD amplitudes specify their impact. Each associated eigenvalue, referred to as DMD eigenvalue, characterizes the frequency and growth rate of the DMD mode. In this paper, we demonstrate how the components of DMD can be utilized to obtain temporal and spatial information from time-dependent flow fields. We begin with the theoretical background of DMD and its application to unsteady flow. Next, we examine the conventional process with DMD mathematically and put it in relationship to the discrete Fourier transform. Our analysis shows that the current use of DMD components has several drawbacks. To resolve these problems we adjust the components and provide new and meaningful insights into the decomposition: We show that our improved components describe the flow more adequately. Moreover, we remove redundancies in the decomposition and clarify the interplay between components, allowing users to understand the impact of components. These new representations ,which respect the spatio-temporal character of DMD, enable two clustering methods that segment the flow into physically relevant sections and can therefore be used for the selection of DMD components. With a number of typical examples, we demonstrate that the combination of these techniques allow new insights with DMD for unsteady flow.

physics.flu-dyn↗

arXiv2020

Evaluating Mixed and Augmented Reality: A Systematic Literature Review (2009-2019)

We present a systematic review of 458 papers that report on evaluations in mixed and augmented reality (MR/AR) published in ISMAR, CHI, IEEE VR, and UIST over a span of 11 years (2009-2019). Our goal is to provide guidance for future evaluations of MR/AR approaches. To this end, we characterize publications by paper type (e.g., technique, design study), research topic (e.g., tracking, rendering), evaluation scenario (e.g., algorithm performance, user performance), cognitive aspects (e.g., perception, emotion), and the context in which evaluations were conducted (e.g., lab vs. in-the-wild). We found a strong coupling of types, topics, and scenarios. We observe two groups: (a) technology-centric performance evaluations of algorithms that focus on improving tracking, displays, reconstruction, rendering, and calibration, and (b) human-centric studies that analyze implications of applications and design, human factors on perception, usability, decision making, emotion, and attention. Amongst the 458 papers, we identified 248 user studies that involved 5,761 participants in total, of whom only 1,619 were identified as female. We identified 43 data collection methods used to analyze 10 cognitive aspects. We found nine objective methods, and eight methods that support qualitative analysis. A majority (216/248) of user studies are conducted in a laboratory setting. Often (138/248), such studies involve participants in a static way. However, we also found a fair number (30/248) of in-the-wild studies that involve participants in a mobile fashion. We consider this paper to be relevant to academia and industry alike in presenting the state-of-the-art and guiding the steps to designing, conducting, and analyzing results of evaluations in MR/AR.

cs.HC↗

arXiv2020

What We See and What We Get from Visualization: Eye Tracking Beyond Gaze Distributions and Scanpaths

Technical progress in hardware and software enables us to record gaze data in everyday situations and over long time spans. Among a multitude of research opportunities, this technology enables visualization researchers to catch a glimpse behind performance measures and into the perceptual and cognitive processes of people using visualization techniques. The majority of eye tracking studies performed for visualization research is limited to the analysis of gaze distributions and aggregated statistics, thus only covering a small portion of insights that can be derived from gaze data. We argue that incorporating theories and methodology from psychology and cognitive science will benefit the design and evaluation of eye tracking experiments for visualization. This position paper outlines our experiences with eye tracking in visualization and states the benefits that an interdisciplinary research field on visualization psychology might bring for better understanding how people interpret visualizations.

cs.HC↗

arXiv2020

IDEAS: Immersive Dome Experiences for Accelerating Science

Astrophysics lies at the crossroads of big datasets (such as the Large Synoptic Survey Telescope and Gaia), open source software to visualize and interpret high dimensional datasets (such as Glue, WorldWide Telescope, and OpenSpace), and uniquely skilled software engineers who bridge data science and research fields. At the same time, more than 4,000 planetariums across the globe immerse millions of visitors in scientific data. We have identified the potential for critical synergy across data, software, hardware, locations, and content that -- if prioritized over the next decade -- will drive discovery in astronomical research. Planetariums can and should be used for the advancement of scientific research. Current facilities such as the Hayden Planetarium in New York City, Adler Planetarium in Chicago, Morrison Planetarium in San Francisco, the Iziko Planetarium and Digital Dome Research Consortium in Cape Town, and Visualization Center C in Norrkoping are already developing software which ingests catalogs of astronomical and multi-disciplinary data critical for exploration research primarily for the purpose of creating scientific storylines for the general public. We propose a transformative model whereby scientists become the audience and explorers in planetariums, utilizing software for their own investigative purposes. In this manner, research benefits from the authentic and unique experience of data immersion contained in an environment bathed in context and equipped for collaboration. Consequently, in this white paper we argue that over the next decade the research astronomy community should partner with planetariums to create visualization-based research opportunities for the field. Realizing this vision will require new investments in software and human capital.

astro-ph.IM↗

arXiv2020

Data-Driven Space-Filling Curves

We propose a data-driven space-filling curve method for 2D and 3D visualization. Our flexible curve traverses the data elements in the spatial domain in a way that the resulting linearization better preserves features in space compared to existing methods. We achieve such data coherency by calculating a Hamiltonian path that approximately minimizes an objective function that describes the similarity of data values and location coherency in a neighborhood. Our extended variant even supports multiscale data via quadtrees and octrees. Our method is useful in many areas of visualization, including multivariate or comparative visualization, ensemble visualization of 2D and 3D data on regular grids, or multiscale visual analysis of particle simulations. The effectiveness of our method is evaluated with numerical comparisons to existing techniques and through examples of ensemble and multivariate datasets.

cs.GR↗

arXiv2020

Visual Causality Analysis of Event Sequence Data

Causality is crucial to understanding the mechanisms behind complex systems and making decisions that lead to intended outcomes. Event sequence data is widely collected from many real-world processes, such as electronic health records, web clickstreams, and financial transactions, which transmit a great deal of information reflecting the causal relations among event types. Unfortunately, recovering causalities from observational event sequences is challenging, as the heterogeneous and high-dimensional event variables are often connected to rather complex underlying event excitation mechanisms that are hard to infer from limited observations. Many existing automated causal analysis techniques suffer from poor explainability and fail to include an adequate amount of human knowledge. In this paper, we introduce a visual analytics method for recovering causalities in event sequence data. We extend the Granger causality analysis algorithm on Hawkes processes to incorporate user feedback into causal model refinement. The visualization system includes an interactive causal analysis framework that supports bottom-up causal exploration, iterative causal verification and refinement, and causal comparison through a set of novel visualizations and interactions. We report two forms of evaluation: a quantitative evaluation of the model improvements resulting from the user-feedback mechanism, and a qualitative evaluation through case studies in different application domains to demonstrate the usefulness of the system.

cs.AI↗

arXiv2020

Efficient 2D Simulation on Moving 3D Surfaces

We present a method to simulate fluid flow on evolving surfaces, e.g., an oil film on a water surface. Given an animated surface (e.g., extracted from a particle-based fluid simulation) in three-dimensional space, we add a second simulation on this base animation. In general, we solve a partial differential equation (PDE) on a level set surface obtained from the animated input surface. The properties of the input surface are transferred to a sparse volume data structure that is then used for the simulation. We introduce one-way coupling strategies from input properties to our simulation and we add conservation of mass and momentum to existing methods that solve a PDE in a narrow-band using the Closest Point Method. In this way, we efficiently compute high-resolution 2D simulations on coarse input surfaces. Our approach helps visual effects creators easily integrate a workflow to simulate material flow on evolving surfaces into their existing production pipeline.

cs.GR↗

arXiv2020

Toward Agile Situated Visualization: An Exploratory User Study

We introduce AVAR, a prototypical implementation of an agile situated visualization (SV) toolkit targeting liveness, integration, and expressiveness. We report on results of an exploratory study with AVAR and seven expert users. In it, participants wore a Microsoft HoloLens device and used a Bluetooth keyboard to program a visualization script for a given dataset. To support our analysis, we (i) video recorded sessions, (ii) tracked users' interactions, and (iii) collected data of participants' impressions. Our prototype confirms that agile SV is feasible. That is, liveness boosted participants' engagement when programming an SV, and so, the sessions were highly interactive and participants were willing to spend much time using our toolkit (i.e., median >= 1.5 hours). Participants used our integrated toolkit to deal with data transformations, visual mappings, and view transformations without leaving the immersive environment. Finally, participants benefited from our expressive toolkit and employed multiple of the available features when programming an SV.

cs.HC↗

arXiv2019

Exploranative Code Quality Documents

Good code quality is a prerequisite for efficiently developing maintainable software. In this paper, we present a novel approach to generate exploranative (explanatory and exploratory) data-driven documents that report code quality in an interactive, exploratory environment. We employ a template-based natural language generation method to create textual explanations about the code quality, dependent on data from software metrics. The interactive document is enriched by different kinds of visualization, including parallel coordinates plots and scatterplots for data exploration and graphics embedded into text. We devise an interaction model that allows users to explore code quality with consistent linking between text and visualizations; through integrated explanatory text, users are taught background knowledge about code quality aspects. Our approach to interactive documents was developed in a design study process that included software engineering and visual analytics experts. Although the solution is specific to the software engineering scenario, we discuss how the concept could generalize to multivariate data and report lessons learned in a broader scope.

cs.HC↗

arXiv2019

Visual Multi-Metric Grouping of Eye-Tracking Data

We present an algorithmic and visual grouping of participants and eye-tracking metrics derived from recorded eye-tracking data. Our method utilizes two well-established visualization concepts. First, parallel coordinates are used to provide an overview of the used metrics, their interactions, and similarities, which helps select suitable metrics that describe characteristics of the eye-tracking data. Furthermore, parallel coordinates plots enable an analyst to test the effects of creating a combination of a subset of metrics resulting in a newly derived eye-tracking metric. Second, a similarity matrix visualization is used to visually represent the affine combination of metrics utilizing an algorithmic grouping of subjects that leads to distinct visual groups of similar behavior. To keep the diagrams of the matrix visualization simple and understandable, we visually encode our eye-tracking data into the cells of a similarity matrix of participants. The algorithmic grouping is performed with a clustering based on the affine combination of metrics, which is also the basis for the similarity value computation of the similarity matrix. To illustrate the usefulness of our visualization, we applied it to an eye-tracking data set involving the reading behavior of metro maps of up to 40 participants. Finally, we discuss limitations and scalability issues of the approach focusing on visual and perceptual issues.

cs.HC↗

arXiv2019

VISON: An Ontology-Based Approach for Software Visualization Tool Discoverability

Although many tools have been presented in the research literature of software visualization, there is little evidence of their adoption. To choose a suitable visualization tool, practitioners need to analyze various characteristics of tools such as their supported software concerns and level of maturity. Indeed, some tools can be prototypes for which the lifespan is expected to be short, whereas others can be fairly mature products that are maintained for a longer time. Although such characteristics are often described in papers, we conjecture that practitioners willing to adopt software visualizations require additional support to discover suitable visualization tools. In this paper, we elaborate on our efforts to provide such support. To this end, we systematically analyzed research papers in the literature of software visualization and curated a catalog of 70 available tools that employ various visualization techniques to support the analysis of multiple software concerns. We further encapsulate these characteristics in an ontology. VISON, our software visualization ontology, captures these semantics as concepts and relationships. We report on early results of usage scenarios that demonstrate how the ontology can support (i) developers to find suitable tools for particular development concerns, and (ii) researchers who propose new software visualization tools to identify a baseline tool for a controlled experiment.

cs.SE↗

arXiv2019

Vis4Vis: Visualization for (Empirical) Visualization Research

Appropriate evaluation is a key component in visualization research. It is typically based on empirical studies that assess visualization components or complete systems. While such studies often include the user of the visualization, empirical research is not necessarily restricted to user studies but may also address the technical performance of a visualization system such as its computational speed or memory consumption. Any such empirical experiment faces the issue that the underlying visualization is becoming increasingly sophisticated, leading to an increasingly difficult evaluation in complex environments. Therefore, many of the established methods of empirical studies can no longer capture the full complexity of the evaluation. One promising solution is the use of data-rich observations that we can acquire during studies to obtain more reliable interpretations of empirical research. For example, we have been witnessing an increasing availability and use of physiological sensor information from eye tracking, electrodermal activity sensors, electroencephalography, etc. Other examples are various kinds of logs of user activities such as mouse, keyboard, or touch interaction. Such data-rich empirical studies promise to be especially useful for studies in the wild and similar scenarios outside of the controlled laboratory environment. However, with the growing availability of large, complex, time-dependent, heterogeneous, and unstructured observational data, we are facing the new challenge of how we can analyze such data. This challenge can be addressed by establishing the subfield of visualization for visualization (Vis4Vis): visualization as a means of analyzing and communicating data from empirical studies to advance visualization research.

cs.HC↗

arXiv2019

Uncertainty-Aware Principal Component Analysis

We present a technique to perform dimensionality reduction on data that is subject to uncertainty. Our method is a generalization of traditional principal component analysis (PCA) to multivariate probability distributions. In comparison to non-linear methods, linear dimensionality reduction techniques have the advantage that the characteristics of such probability distributions remain intact after projection. We derive a representation of the PCA sample covariance matrix that respects potential uncertainty in each of the inputs, building the mathematical foundation of our new method: uncertainty-aware PCA. In addition to the accuracy and performance gained by our approach over sampling-based strategies, our formulation allows us to perform sensitivity analysis with regard to the uncertainty in the data. For this, we propose factor traces as a novel visualization that enables to better understand the influence of uncertainty on the chosen principal components. We provide multiple examples of our technique using real-world datasets. As a special case, we show how to propagate multivariate normal distributions through PCA in closed form. Furthermore, we discuss extensions and limitations of our approach.

cs.LG↗