arXiv subjects

David Soriano-Paños

Publications and source records attributed to David Soriano-Paños.

27 records · Page 2Linked to original sources

arXiv2021

Infectious disease dynamics in metapopulations with heterogeneous transmission and recurrent mobility

Human mobility, contact patterns, and their interplay are key aspects of our social behavior that shape the spread of infectious diseases across different regions. In the light of new evidence and data sets about these two elements, epidemic models should be refined to incorporate both the heterogeneity of human contacts and the complexity of mobility patterns. Here, we propose a theoretical framework that allows accommodating these two aspects in the form of a set of Markovian equations. We validate these equations with extensive mechanistic simulations and derive analytically the epidemic threshold. The expression of this critical value allows us to evaluate its dependence on the specific demographic distribution, the structure of mobility flows, and the heterogeneity of contact patterns, thus shedding light on the microscopic mechanisms responsible for the epidemic detriment driven by recurrent mobility patterns reported in the literature.

physics.soc-ph↗

arXiv2021

Interplay between intra-urban population density and mobility in determining the spread of epidemics

In this work, we address the connection between population density centers in urban areas, and the nature of human flows between such centers, in shaping the vulnerability to the onset of contagious diseases. A study of 163 cities, chosen from four different continents reveals a universal trend, whereby the risk induced by human mobility increases in those cities where mobility flows are predominantly between high population density centers. We apply our formalism to the spread of SARS-COV-2 in the United States, providing a plausible explanation for the observed heterogeneity in the spreading process across cities. Armed with this insight, we propose realistic mitigation strategies (less severe than lockdowns), based on modifying the mobility in cities. Our results suggest that an optimal control strategy involves an asymmetric policy that restricts flows entering the most vulnerable areas but allowing residents to continue their usual mobility patterns.

physics.soc-ph↗

arXiv2021

Virus spread versus contact tracing: two competing contagion processes

After the blockade that many nations suffered to stop the growth of the incidence curve of COVID-19 during the first half of 2020, they face the challenge of resuming their social and economic activity. The rapid airborne transmissibility of SARS-CoV-2, and the absence of a vaccine, calls for active containment measures to avoid the propagation of transmission chains. The best strategy up to date, popularly known as Test-Track-Treat (TTT), consist in testing the population for diagnosis, track the contacts of those infected, and treat by quarantine all these cases. The dynamical process that better describes the combined action of the former mechanisms is that of a contagion process that competes with the spread of the pathogen, cutting off potential contagion pathways. Here we propose a compartmental model that couples the dynamics of the infection with the contact tracing and isolation of cases. We develop an analytical expression for the effective case reproduction number $R_c(t)$ that reveals the role of contact tracing in the mitigation and suppression of the epidemics. We show that there is a trade off between the infection propagation and the isolation of cases. If the isolation is limited to symptomatic individuals only, the incidence curve can be flattened but not bended. However, if contact tracing is applied to asymptomatic individuals too, the strategy can bend the curve and suppress the epidemics. Quantitative results are dependent on the network topology. We quantify, the most important indicator of the effectiveness of contact tracing, namely its capacity to reverse the increasing tendency of the epidemic curve, causing its bending.

physics.soc-ph↗

arXiv2019

Vector-borne epidemics driven by human mobility

Vector-borne epidemics are the result of the combination of different factors such as the crossed contagions between humans and vectors, their demographic distribution and human mobility among others. The current availability of information about the former ingredients demands their incorporation to current mathematical models for vector-borne disease transmission. Here, relying on metapopulation dynamics, we propose a framework whose results are in fair agreement with those obtained from mechanistic simulations. This framework allows us to derive an expression of the epidemic threshold capturing with high accuracy the conditions leading to the onset of epidemics. Driven by these insights, we obtain a prevalence indicator to rank the patches according to the risk of being affected by a vector-borne disease. We illustrate the utility of this epidemic risk indicator by reproducing the spatial distribution Dengue cases reported in the city of Santiago de Cali (Colombia) from 2015 to 2016.

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arXiv2019

Impact of temporal scales and recurrent mobility patterns on the unfolding of epidemics

Human mobility plays a key role on the transformation of local disease outbreaks into global pandemics. Thus, the inclusion of human movements into epidemic models has become mandatory for understanding current epidemic episodes and to design efficient prevention policies. Following this challenge, here we develop a Markovian framework which enables to address the impact of recurrent mobility patterns on the epidemic onset at different temporal scales. This formalism is validated by comparing their predictions with results from mechanistic simulations. The fair agreement between both theory and simulations enables to get an analytical expression for the epidemic threshold which captures the critical conditions triggering epidemic outbreaks. Finally, by performing an exhaustive analysis of this epidemic threshold, we reveal that the impact of tuning human mobility on the emergence of diseases is strongly affected by the temporal scales associated to both epidemiological and mobility processes.

physics.soc-ph↗

arXiv2019

Markovian approach to tackle the interaction of simultaneous diseases

The simultaneous emergence of several abrupt disease outbreaks or the extinction of some serotypes of multi-strain diseases are fingerprints of the interaction between pathogens spreading within the same population. Here, we propose a general and versatile benchmark to address the unfolding of both cooperative and competitive interacting diseases. We characterize the explosive transitions between the disease-free and the epidemic regimes arising from the cooperation between pathogens, and show the critical degree of cooperation needed for the onset of such abrupt transitions. For the competing diseases, we characterize the mutually exclusive case and derive analytically the transition point between the full-dominance phase, in which only one pathogen propagates, and the coexistence regime. Finally, we use this framework to analyze the behavior of the former transition point as the competition between pathogens is relaxed.

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arXiv2019

Explosive transitions induced by interdependent contagion-consensus dynamics in multiplex networks

We introduce a model to study the delicate relation between the spreading of information and the formation of opinions in social systems. For this purpose, we propose a two-layer multiplex network model in which consensus dynamics takes place in one layer while information spreading runs across the other one. The two dynamical processes are mutually coupled by considering that the control parameters that govern the dynamical evolution of the state of the nodes inside each layer depend on the dynamical states at the other layer. In particular, we explore the scenario in which consensus is favored by the common adoption of information while information spreading is boosted between agents sharing similar opinions. Numerical simulations together with some analytical results point out that, when the coupling between the dynamics of the two layers is strong enough, a double explosive transition, i.e. an explosive transition both for consensus dynamics and for the information spreading appears. Such explosive transitions lead to bi-stability regions in which the consensus-informed stated and the disagreement-ignorant states are both stable solutions.

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arXiv2018

Impact of human-human contagions in the spread of vector-borne diseases

This article is aimed at proposing a generalization of the Ross-Macdonald model for the transmission of Vector-borne diseases in which human-to-human contagions are also considered. We first present this generalized model by formulating a mean field theory, checking its validity by comparing to numerical simulations. To make the premises of our model more realistic, we adapt the mean field equations to the case in which human contacts are described by a complex network. In this case we are also able to derive an analytical expression for the epidemic threshold. In both the mean-field and network-based models, we estimate the value of the epidemic threshold which corresponds to the boundary between the disease-free and epidemic regimes. The expression of this threshold allows us to discuss the impact that human-to-human contagions have on the spread of vector-borne diseases.

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arXiv2018

A framework for epidemic spreading in multiplex networks of metapopulations

We propose a theoretical framework for the study of epidemics in structured metapopulations, with heterogeneous agents, subjected to recurrent mobility patterns. We propose to represent the heterogeneity in the composition of the metapopulations as layers in a multiplex network, where nodes would correspond to geographical areas and layers account for the mobility patterns of agents of the same class. We analyze both the classical Susceptible-Infected-Susceptible and the Susceptible-Infected-Removed epidemic models within this framework, and compare macroscopic and microscopic indicators of the spreading process with extensive Monte Carlo simulations. Our results are in excellent agreement with the simulations. We also derive an exact expression of the epidemic threshold on this general framework revealing a non-trivial dependence on the mobility parameter. Finally, we use this new formalism to address the spread of diseases in real cities, specifically in the city of Medellin, Colombia, whose population is divided into six socio-economic classes, each one identified with a layer in this multiplex formalism.

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