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David Taylor

Publications and source records attributed to David Taylor.

10 recordsLinked to original sources

Label-free quantitative imaging of two-dimensional concentration gradients using Fabry-P\'erot interferometry

Concentration gradients at the microscale play a central role in many physical, chemical, and biological systems, yet their quantitative visualization remains challenging due to the limited optical contrast associated with changes in concentration. Here, we present RIO (the Refractive Index Observer), a label-free interferometric tool for quantitative imaging of refractive index, and thus concentration fields in microfluidic systems. Implemented using a Fabry-P\'{e}rot microfluidic chip mounted on a standard optical microscope, RIO achieves a per-pixel refractive index precision on the order of $1\times 10^{-5}$ refractive index units (RIU) using a standard CMOS camera, enabling high sensitivity two-dimensional chemical imaging. We Characterize the refractive index resolution and spatiotemporal performance of the instrument and demonstrate its capabilities by measuring concentration gradients of dissolved NaCl in a co-laminar flow. RIO provides an accessible, label-free platform for quantitative studies of microscale concentration fields in systems where molecular labeling is undesirable or impractical, and enables investigations of a broad range of out-of-equilibrium phenomena, from polymerization and enzymatic reactions to cell signaling and electrochemical processes.

physics.optics

Explainable and externally validated machine learning for neurocognitive diagnosis via electrocardiograms

Background: Electrocardiogram (ECG) analysis has emerged as a promising tool for detecting physiological changes linked to non-cardiac disorders. Given the close connection between cardiovascular and neurocognitive health, ECG abnormalities may be present in individuals with co-occurring neurocognitive conditions. This highlights the potential of ECG as a biomarker to improve detection, therapy monitoring, and risk stratification in patients with neurocognitive disorders, an area that remains underexplored. Methods: We aim to demonstrate the feasibility to predict neurocognitive disorders from ECG features across diverse patient populations. We utilized ECG features and demographic data to predict neurocognitive disorders defined by ICD-10 codes, focusing on dementia, delirium, and Parkinson's disease. Internal and external validations were performed using the MIMIC-IV and ECG-View datasets. Predictive performance was assessed using AUROC scores, and Shapley values were used to interpret feature contributions. Results: Significant predictive performance was observed for disorders within the neurcognitive disorders. Significantly, the disorders with the highest predictive performance is F03: Dementia, with an internal AUROC of 0.848 (95% CI: 0.848-0.848) and an external AUROC of 0.865 (0.864-0.965), followed by G30: Alzheimer's, with an internal AUROC of 0.809 (95% CI: 0.808-0.810) and an external AUROC of 0.863 (95% CI: 0.863-0.864). Feature importance analysis revealed both known and novel ECG correlates. ECGs hold promise as non-invasive, explainable biomarkers for selected neurocognitive disorders. This study demonstrates robust performance across cohorts and lays the groundwork for future clinical applications, including early detection and personalized monitoring.

eess.SP

Towards a Personal Health Knowledge Graph Framework for Patient Monitoring

Healthcare providers face significant challenges with monitoring and managing patient data outside of clinics, particularly with insufficient resources and limited feedback on their patients' conditions. Effective management of these symptoms and exploration of larger bodies of data are vital for maintaining long-term quality of life and preventing late interventions. In this paper, we propose a framework for constructing personal health knowledge graphs from heterogeneous data sources. Our approach integrates clinical databases, relevant ontologies and standard healthcare guidelines to support alert generation, clinician interpretation and querying of patient data. Through a use case of monitoring Chronic Obstructive Pulmonary Disease (COPD) patients, we demonstrate that inference and reasoning on personal health knowledge graphs built with our framework can aid in patient monitoring and enhance the efficacy and accuracy of patient data queries.

cs.DB

Rapid micro-immunohistochemistry

We present a new and versatile implementation of rapid and localized immunohistochemical staining of tissue sections. Immunohistochemistry (IHC) allows to detect specific proteins on tissue sections and comprises a sequence of specific biochemical reactions. For the rapid implementation of IHC, we fabricated horizontally oriented microfluidic probes (MFP) with functionally designed apertures to enable square and circular footprints, which we employ to locally expose a tissue to time-optimized sequences of different biochemicals.

q-bio.TO

Parameter estimation for stable distributions with application to commodity futures log returns

This paper explores the theory behind the rich and robust family of {\alpha}-stable distributions to estimate parameters from financial asset log-returns data. We discuss four-parameter estimation methods including the quantiles, logarithmic moments method, maximum likelihood (ML), and the empirical characteristics function (ECF) method. The contribution of the paper is two-fold: first, we discuss the above parametric approaches and investigate their performance through error analysis. Moreover, we argue that the ECF performs better than the ML over a wide range of shape parameter values, {\alpha}{\alpha} including values closest to 0 and 2 and that the ECF has a better convergence rate than the ML. Secondly, we compare the t location-scale distribution to the general stable distribution and show that the former fails to capture skewness which might exist in the data. This is observed through applying the ECF to commodity futures log-returns data to obtain the skewness parameter.

econ.GN

Loading Pricing of Catastrophe Bonds and Other Long-Dated, Insurance-Type Contracts

Catastrophe risk is a major threat faced by individuals, companies, and entire economies. Catastrophe (CAT) bonds have emerged as a method to offset this risk and a corresponding literature has developed that attempts to provide a market-consistent pricing methodology for these and other long-dated, insurance-type contracts. This paper aims to unify and generalize several of the widely-used pricing approaches for long-dated contracts with a focus on stylized CAT bonds and market-consistent valuation. It proposes a loading pricing concept that combines the theoretically possible minimal price of a contract with its formally obtained risk neutral price, without creating economically meaningful arbitrage. A loading degree controls how much influence the formally obtained risk neutral price has on the market price. A key finding is that this loading degree has to be constant for a minimally fluctuating contract, and is an important, measurable characteristic for prices of long-dated contracts. Loading pricing allows long-dated, insurance-type contracts to be priced less expensively and with higher return on investment than under classical pricing approaches. Loading pricing enables insurance companies to accumulate systematically reserves needed to manage its risk of ruin in a market consistent manner.

q-fin.MF

Neutron shielding and activation of the MASTU device and surrounds

A significant functional upgrade is planned for the Mega Ampere Spherical Tokamak (MAST) device, located at Culham in the UK, including the implementation of a notably greater neutral beam injection power. This upgrade will cause the emission of a substantially increased intensity of neutron radiation for a substantially increased amount of time upon operation of the device. Existing shielding and activation precautions are shown to prove insufficient in some regards, and recommendations for improvements are made, including the following areas: shielding doors to MAST shielded facility enclosure (known as "the blockhouse"); north access tunnel; blockhouse roof; west cabling duct. In addition, some specific neutronic dose rate questions are addressed and answered; those discussed here relate to shielding penetrations and dose rate reflected from the air above the device ("skyshine").

physics.ins-det

Deep Underground Science and Engineering Laboratory - Preliminary Design Report

The DUSEL Project has produced the Preliminary Design of the Deep Underground Science and Engineering Laboratory (DUSEL) at the rehabilitated former Homestake mine in South Dakota. The Facility design calls for, on the surface, two new buildings - one a visitor and education center, the other an experiment assembly hall - and multiple repurposed existing buildings. To support underground research activities, the design includes two laboratory modules and additional spaces at a level 4,850 feet underground for physics, biology, engineering, and Earth science experiments. On the same level, the design includes a Department of Energy-shepherded Large Cavity supporting the Long Baseline Neutrino Experiment. At the 7,400-feet level, the design incorporates one laboratory module and additional spaces for physics and Earth science efforts. With input from some 25 science and engineering collaborations, the Project has designed critical experimental space and infrastructure needs, including space for a suite of multidisciplinary experiments in a laboratory whose projected life span is at least 30 years. From these experiments, a critical suite of experiments is outlined, whose construction will be funded along with the facility. The Facility design permits expansion and evolution, as may be driven by future science requirements, and enables participation by other agencies. The design leverages South Dakota's substantial investment in facility infrastructure, risk retirement, and operation of its Sanford Laboratory at Homestake. The Project is planning education and outreach programs, and has initiated efforts to establish regional partnerships with underserved populations - regional American Indian and rural populations.

hep-ex

Symmetries of particle motion

We define affine transport lifts on the tangent bundle by associating a transport rule for tangent vectors with a vector field on the base manifold. The aim is to develop tools for the study of kinetic/ dynamical symmetries in relativistic particle motion. The transport lift unifies and generalises the various existing lifted vector fields, with clear geometric interpretations. We find the affine dynamical symmetries of free particle motion, and compare this to previous results and to the alternative concept of "matter symmetry".

math-ph

Kinematics and Dynamics of $f(R)$ Theories of Gravity

We generalise the equations governing relativistic fluid dynamics given by Ehlers and Ellis for general relativity, and by Maartens and Taylor for quadratic theories, to generalised $f(R)$ theories of gravity. In view of the usefulness of this alternative framework to general relativity, its generalisation can be of potential importance for deriving analogous results to those obtained in general relativity. We generalise, as an example, the results of Maartens and Taylor to show that within the framework of general $f(R)$ theories, a perfect fluid spacetime with vanishing vorticity, shear and acceleration is Friedmann--Lema\^ıtre--Robertson--Walker only if the fluid has in addition a barotropic equation of state. It then follows that the Ehlers--Geren--Sachs theorem and its ``almost'' extension also hold for $f(R)$ theories of gravity.

gr-qc