arXiv subjects

David Tománek

Publications and source records attributed to David Tománek.

At least 19 recordsLinked to original sources

arXiv2022

Thermal decomposition of hydrated graphite oxide: A computational study

We study the behavior of hydrated graphite oxide (GO) at high temperatures using thermally accelerated molecular dynamics simulations based on ab initio density functional theory. Our results suggest that GO, a viable candidate for water treatment and desalination membranes, is more heat resilient than currently used organic materials. The system we consider to represent important aspects of thermal processes in highly disordered GO is a hydrated GO bilayer in vacuum. Our study provides microscopic insight into reactions involving water and functional epoxy-O and OH-groups bonded to graphene layers, and also describes the swelling of the structure by water vapor pressure at elevated temperatures. We find the system to withstand simulation temperatures up to ${\approx}$2,500 K before the graphitic layers start decomposing, implying the possibility of cleaning biofouling residue from a GO-based membrane by heating in an inert gas atmosphere.

cond-mat.mtrl-sci↗

arXiv2021

Flow of Polar and Nonpolar Liquids through Nanotubes: A Computational Study

We perform ab initio density functional calculations to study the flow of water, methanol and dimethyl ether through nanotubes of carbon and boron nitride with different diameters and chiralities. The liquids we choose are important solvents, with water and methanol being polar and dimethyl ether being non-polar. In terms of activation barriers for liquid transport, we find the molecular-level drag to decrease with decreasing nanotube diameter, but to be rather independent of the chiral index. We also find molecules with higher polarity to experience higher drag during the flow. Counter-intuitively, we find the drag for water in boron nitride nanotubes not to exceed that in carbon nanotubes due to frustration in competing long-range Coulomb interactions.

cond-mat.mtrl-sci↗

arXiv2020

Low-symmetry two-dimensional BNP$_2$ and C$_2$SiS structures with high and anisotropic carrier mobilities

We study the stability and electronic structure of previously unexplored two-dimensional (2D) ternary compounds BNP$_2$ and C$_2$SiS. Using $ab$ $initio$ density functional theory, we have identified four stable allotropes of each ternary compound and confirmed their stability by calculated phonon spectra and molecular dynamics simulations. Whereas all BNP$_2$ allotropes are semiconducting, we find C$_2$SiS, depending on the allotrope, to be semiconducting or semimetallic. The fundamental band gaps of the semiconducting allotropes we study range from $1.4$ eV to $2.2$ eV at the HSE06 level $0.5$ eV to $1.4$ eV at the PBE level and display carrier mobilities as high as $1.5{\times}10^5$ cm$^2$V$^{-1}$s$^{-1}$. Such high mobilities are quite uncommon in semiconductors with so wide band gaps. Structural ridges in the geometry of all allotropes cause a high anisotropy in their mechanical and transport properties, promising a wide range of applications in electronics and optoelectronics.

cond-mat.mtrl-sci↗

arXiv2020

Liquid Flow through Defective Layered Membranes: A Phenomenological Description

We present a realistic phenomenological description of liquid transport through defective, layered membranes. We derive general expressions based on conventional models of laminar flow and extend the formalism to accommodate slip flow. We consider different types of defects including in-layer vacancies that provide an activation-free tortuous path through the membrane. Of the many factors that affect flow, the most important is the radius of in-layer vacancy defects, which enters in the fourth power in expressions for the flux density. We apply our formalism to water transport through defective multilayer graphene oxide membranes and find that the flow remains in the laminar regime. Our results show that observed high water permeability in this system can be explained quantitatively by a sufficient density of in-layer pores that shorten the effective diffusion path.

cond-mat.mtrl-sci↗

arXiv2020

Superior Hardness and Stiffness of Diamond Nanoparticles

We introduce a computational approach to estimate the hardness and stiffness of diamond surfaces and nanoparticles by studying their elastic response to atomic nanoindentation. Results of our ab initio density functional calculations explain the observed hardness differences between different diamond surfaces and suggest bond stiffening in bare and hydrogenated fragments of cubic diamond and lonsdaleite. The increase in hardness and stiffness can be traced back to bond length reduction especially in bare nanoscale diamond clusters, a result of compression that is driven by the dominant role of the surface tension.

cond-mat.mes-hall↗

arXiv2020

Strain-Controlled Magnetic Ordering in 2D Carbon Metamaterials

We use ab initio spin-polarized density functional theory to study the magnetic order in a Kagomé-like 2D metamaterial consisting of pristine or substitutionally doped phenalenyl radicals polymerized into a nanoporous, graphene-like structure. In this and in a larger class of related structures, the constituent polyaromatic hydrocarbon molecules can be considered as quantum dots that may carry a net magnetic moment. The structure of this porous system and the coupling between the quantum dots may be changed significantly by applying moderate strain, thus allowing to control the magnetic order and the underlying electronic structure.

cond-mat.mes-hall↗

arXiv2019

Designing an All-Carbon Membrane for Water Desalination

We design an all-carbon membrane for the filtration and desalination of water. A unique layered assembly of carbon nanostructures including graphite oxide (GO), buckypaper consisting of carbon nanotubes, and a strong carbon fabric provides high mechanical strength and thermal stability, resilience to harsh chemical cleaning agents and electrical conductivity, thus addressing major shortcomings of commercial reverse osmosis membranes. We use ab initio density functional theory calculations to obtain atomic-level insight into the permeation of water molecules in-between GO layers and across in-layer vacancy defects. Our calculations elucidate the reason for selective rejection of solvated Na$^+$ ions in an optimized GO membrane that is structurally stabilized in a sandwich arrangement in-between layers of buckypaper, which are protected on both sides by strong carbon fabric layers.

cond-mat.mtrl-sci↗

arXiv2018

Is Twisted Bilayer Graphene Stable under Shear?

In twisted bilayer graphene (TBLG), extremely small deviations from the magic twist angle $θ_m{\approx}1.08^\circ$ change its electronic structure near the Fermi level drastically, causing a meV-wide flat band to appear or disappear. In view of such sensitivity to minute structural deformations, we investigate the combined effect of shear and atomic relaxation on the electronic structure. Using precise experimental data for monolayer and bilayer graphene as input in a simplified formalism for the electronic structure and elastic energy, we find TBLG near $θ_m$ to be unstable with respect to global shear by the angle $α{\approx}0.08^\circ$. In TBLG, the effect of shear on the electronic structure is as important as that of atomic relaxation. Under optimum global shear, calculated $θ_m$ is reduced by $0.04^\circ$ and agrees with the observed value.

cond-mat.mes-hall↗

arXiv2018

Minimum model for the electronic structure of twisted bilayer graphene and related structures

We introduce a minimum tight-binding model with only three parameters extracted from graphene and untwisted bilayer graphene. This model reproduces quantitatively the electronic structure of not only these two systems and bulk graphite near the Fermi level, but also that of twisted bilayer graphene including the value of the magic angle, at which bands at $E_F$ flatten without overlap and two gaps open, one above and one below $E_F$. The Hamiltonian is sufficiently transparent and flexible to be adopted to other twisted layered systems.

cond-mat.mes-hall↗

arXiv2017

Chemical and Electronic Repair Mechanism of Sulfur Defects in MoS$_2$ Monolayers

Using {\em ab initio} density functional theory calculations, we characterize changes in the electronic structure of MoS$_{2}$ monolayers introduced by missing or additional adsorbed sulfur atoms. We furthermore identify the chemical and electronic function of substances that have been reported to reduce the adverse effect of sulfur vacancies in quenching photoluminescence and reducing electronic conductance. We find that thiol-group containing molecules adsorbed at vacancy sites may re-insert missing sulfur atoms. In presence of additional adsorbed sulfur atoms, thiols may form disulfides on the MoS$_{2}$ surface to mitigate the adverse effect of defects.

physics.chem-ph↗

arXiv2015

A metallic mosaic phase and the origin of Mott insulating state in 1T-TaS2

Electron-electron and electron-phonon interactions are two major driving forces that stabilize various charge-ordered phases of matter. The intricate interplay between the two give rises to a peculiar charge density wave (CDW) state, which is also known as a Mott insulator, as the ground state of layered compound 1T-TaS2. The delicate balance also makes it possible to use external perturbations to create and manipulate novel phases in this material. Here, we study a mosaic CDW phase induced by voltage pulses from the tip of a scanning tunneling microscope (STM), and find that the new phase exhibit electronic structures that are entirely different from the Mott ground state of 1T-TaS2 at low temperatures. The mosaic phase consists of nanometer-sized domains characterized by well-defined phase shifts of the CDW order parameter in the topmost layer, and by altered stacking relative to the layer underneath. We discover that the nature of the new phases is dictated by the stacking order, and our results shed fresh light on the origin of the Mott phase in this layered compound.

cond-mat.mtrl-sci↗

arXiv2015

Simulated scanning tunneling microscopy images of few-layer-phosphorus capped by graphene and hexagonal boron nitride monolayers

Elemental phosphorous is believed to have several stable allotropes that are energetically nearly degenerate, but chemically reactive. To prevent chemical degradation under ambient conditions, these structures may be capped by monolayers of hexagonal boron nitride ({\em h}-BN) or graphene. We perform {\em ab initio} density functional calculations to simulate scanning tunneling microscopy (STM) images of different layered allotropes of phosphorus and study the effect of capping layers on these images. We find that protective monolayers of insulating {\em h}-BN allow to distinguish between the different structural phases of phosphorus underneath, even though the images are filtered through only nitrogen atoms that appear transparent. No such distinction is possible for phosphorus films capped by semimetallic graphene that masks the underlying structure. Our results suggest that the real-space imaging capability of STM is not hindered by selected capping layers that protect phosphorus surfaces.

cond-mat.mes-hall↗

arXiv2014

Tiling Phosphorene

We present a scheme to categorize the structure of different layered phosphorene allotropes by mapping their non-planar atomic structure onto a two-color 2D triangular tiling pattern. In the buckled structure of a phosphorene monolayer, we assign atoms in "top" positions to dark tiles and atoms in "bottom" positions to light tiles. Optimum $sp^3$ bonding is maintained throughout the structure when each triangular tile is surrounded by the same number $N$ of like-colored tiles, with $0{\le}N{\le}2$. Our ab initio density functional calculations indicate that both the relative stability and electronic properties depend primarily on the structural index $N$. The proposed mapping approach may also be applied to phosphorene structures with non-hexagonal rings and 2D quasicrystals with no translational symmetry, which we predict to be nearly as stable as the hexagonal network.

physics.comp-ph↗

arXiv2014

Local curvature and stability of two-dimensional systems

We propose a fast method to determine the local curvature in two-dimensional (2D) systems with arbitrary shape. The curvature information, combined with elastic constants obtained for a planar system, provides an accurate estimate of the local stability in the framework of continuum elasticity theory. Relative stabilities of graphitic structures including fullerenes, nanotubes and schwarzites, as well as phosphorene nanotubes, calculated using this approach, agree closely with ab initio density functional calculations. The continuum elasticity approach can be applied to all 2D structures and is particularly attractive in complex systems with known structure, where the quality of parameterized force fields has not been established.

cond-mat.mtrl-sci↗

arXiv2014

High stability of faceted nanotubes and fullerenes of multi-phase layered phosphorus: A computational study

We present a paradigm in constructing very stable, faceted nanotube and fullerene structures by laterally joining nanoribbons or patches of different planar phosphorene phases. Our ab initio density functional calculations indicate that these phases may form very stable, non-planar joints. Unlike fullerenes and nanotubes obtained by deforming a single-phase planar monolayer at substantial energy penalty, we find faceted fullerenes and nanotubes to be nearly as stable as the planar single-phase monolayers. The resulting rich variety of polymorphs allows to tune the electronic properties of phosphorene nanotubes (PNTs) and fullerenes not only by the chiral index, but also by the combination of different phosphorene phases. In selected PNTs, a metal-insulator transition may be induced by strain or changing the number of walls.

cond-mat.mtrl-sci↗

arXiv2014

Phase coexistence and metal-insulator transition in few-layer phosphorene: A computational study

Based on {\em ab initio} density functional calculations, we propose $γ$-P and $δ$-P as two additional stable structural phases of layered phosphorus besides the layered $α$-P (black) and $β$-P (blue) phosphorus allotropes. Monolayers of some of these allotropes have a wide band gap, whereas others, including $γ$-P, show a metal-insulator transition caused by in-layer strain or changing the number of layers. An unforeseen benefit is the possibility to connect different structural phases at no energy cost. This becomes particularly valuable in assembling heterostructures with well-defined metallic and semiconducting regions in one contiguous layer.

cond-mat.mtrl-sci↗

arXiv2014

Spontaneous graphitization of ultrathin cubic structures: A computational study

Results based on {\em ab initio} density functional calculations indicate a general graphitization tendency in ultrathin slabs of cubic diamond, boron nitride, and many other cubic structures including rocksalt. Whereas such compounds often show an energy preference for cubic rather than layered atomic arrangements in the bulk, the surface energy of layered systems is commonly lower than that of their cubic counterparts. We determine the critical slab thickness for a range of systems, below which a spontaneous conversion from a cubic to a layered graphitic structure occurs, driven by surface energy reduction in surface-dominated structures.

cond-mat.mtrl-sci↗

arXiv2014

High Mobility WSe2 p- and n-Type Field Effect Transistors Contacted by Highly Doped Graphene for Low-Resistance Contacts

We report the fabrication of both n-type and p-type WSe2 field effect transistors with hexagonal boron nitride passivated channels and ionic-liquid (IL)-gated graphene contacts. Our transport measurements reveal intrinsic channel properties including a metal-insulator transition at a characteristic conductivity close to the quantum conductance e2/h, a high ON/OFF ratio of >107 at 170 K, and large electron and hole mobility of ~200 cm2V-1s-1 at 160 K. Decreasing the temperature to 77 K increases mobility of electrons to ~330 cm2V-1s-1 and that of holes to ~270 cm2V-1s-1. We attribute our ability to observe the intrinsic, phonon limited conduction in both the electron and hole channels to the drastic reduction of the Schottky barriers between the channel and the graphene contact electrodes using IL gating. We elucidate this process by studying a Schottky diode consisting of a single graphene/WSe2 Schottky junction. Our results indicate the possibility to utilize chemically or electrostatically highly doped graphene for versatile, flexible and transparent low-resistance Ohmic contacts to a wide range of quasi-2D semiconductors. KEYWORDS: MoS2, WSe2, field-effect transistors, graphene, Schottky barrier, ionic-liquid gate

cond-mat.mtrl-sci↗