SearcharxivSearch

arXiv subjects

David Wen

Publications and source records attributed to David Wen.

5 recordsLinked to original sources

In the Picture: Medical Imaging Datasets, Artifacts, and their Living Review

Datasets play a critical role in medical imaging research, yet issues such as label quality, shortcuts, and metadata are often overlooked. This lack of attention may harm the generalizability of algorithms and, consequently, negatively impact patient outcomes. While existing medical imaging literature reviews mostly focus on machine learning (ML) methods, with only a few focusing on datasets for specific applications, these reviews remain static -- they are published once and not updated thereafter. This fails to account for emerging evidence, such as biases, shortcuts, and additional annotations that other researchers may contribute after the dataset is published. We refer to these newly discovered findings of datasets as research artifacts. To address this gap, we propose a living review that continuously tracks public datasets and their associated research artifacts across multiple medical imaging applications. Our approach includes a framework for the living review to monitor data documentation artifacts, and an SQL database to visualize the citation relationships between research artifact and dataset. Lastly, we discuss key considerations for creating medical imaging datasets, review best practices for data annotation, discuss the significance of shortcuts and demographic diversity, and emphasize the importance of managing datasets throughout their entire lifecycle. Our demo is publicly available at http://inthepicture.itu.dk/.

cs.CV

Flops and Mordell-Weil group of Elliptic Threefolds with (4,6,12)-singular fibers

Let $f: W \rightarrow T$ be an elliptic threefold that is a Weierstrass model, which is locally defined by $y^2 = x^3 + fx + g$ over $T$, with a singular fiber such that $(f,g,4f^3 + 27g^2)$ vanishes of order $(4,6,12)$ over an isolated point over $T$. Such a fiber can be explicitly resolved to fibers with smaller vanishing order and the resulting model, $Y$, contains a rational elliptic surface, $S$, where some sections of $S$ are flopping curves on $Y$. As a consequence of this arithmetic and geometric connection, we are able to describe some constraints between flops of $Y$ and the properties of the Mordell-Weil group of $S$ and $Y$.

math.AG

Higher Dimensional Elliptic Fibrations and Zariski Decompositions

We study the existence and properties of birationally equivalent models for elliptically fibered varieties. In particular these have either the structure of Mori fiber spaces or, assuming some standard conjectures, minimal models with a Zariski decomposition compatible with the elliptic fibration. We prove relations between the birational invariants of the elliptically fibered variety, the base of the fibration and of its Jacobian.

math.AG