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Dimitri Breda

Publications and source records attributed to Dimitri Breda.

At least 19 recordsLinked to original sources

A weak order 2 Runge-Kutta method for It\^o stochastic delay differential equations

We present a Runge-Kutta method of weak order 2 for the numerical time integration of stochastic delay differential equations. This scheme extends the class of second order Runge-Kutta methods introduced by A. R\"o{\ss}ler in [SIAM J. Numer. Anal., 47(3):1713-1738, 2009] for stochastic ordinary differential equations. The proposed integrator is applicable to equations with discrete commensurable delays and is particularly efficient for problems involving multiple noise terms. Experimental confirmation of the weak order 2 is provided and MATLAB codes are freely available.

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Hopf bifurcation and periodic solutions in a sustainable supply chain defined by a planar system of ordinary differential equations

We analyze the stability of the equilibria and bifurcations of a planar system of ordinary differential equations describing the product-resource interaction in a sustainable supply chain. While periodic behavior in supply chain models has often been documented either in systems of higher dimensions or in delayed systems, here a Hopf bifurcation arises in a planar and delay-free system. We show that the interior equilibrium loses stability through a supercritical Hopf bifurcation as the environmental capacity exceeds a critical threshold that depends on the maximum production rate, the resource level at which production reaches half its maximum rate, and the demand and remanufacturing rates. We derive this threshold explicitly and provide estimates for the amplitude and period of the periodic solution close to the Hopf bifurcation, by means of the resulting Hopf normal form. We then further substantiate our analytical results through numerical simulations.

math.DS

Exploring Memory Effects: Sparse Identification in Vector-Borne Diseases

Predicting the human burden of vector-borne diseases from limited surveillance data remains a major challenge, particularly in the presence of nonlinear transmission dynamics and delayed effects arising from vector ecology and human behavior. We develop a data-driven framework based on an extension of Sparse Identification of Nonlinear Dynamics (SINDy) to systems with distributed memory, enabling discovery of transmission mechanisms directly from time series data. Using severe fever with thrombocytopenia syndrome (SFTS) as a case study, we show that this approach can uncover key features of tick-borne disease dynamics using only human incidence and local temperature data, without imposing predefined assumptions on human case reporting. We further demonstrate that predictive performance is substantially enhanced when the data-driven model is coupled with mechanistic representations of tick-host transmission pathways informed by empirical studies. The framework supports systematic sensitivity analysis of memory kernels and behavioral parameters, identifying those most influential for prediction accuracy. Although the approach prioritizes predictive accuracy over mechanistic transparency, it yields sparse, interpretable integral representations suitable for epidemiological forecasting. This hybrid methodology provides a scalable strategy for forecasting vector-borne disease risk and informing public health decision-making under data limitations.

math.DS

Approximating evolution operators of linear delay equations: a general framework for the convergence analysis

We consider the problem of discretizing evolution operators of linear delay equations with the aim of approximating their spectra, which is useful in investigating the stability properties of (nonlinear) equations via the principle of linearized stability. We develop a general convergence analysis based on a reformulation of the operators by means of a fixed-point equation, providing a list of hypotheses related to the regularization properties of the equation and the convergence of the chosen approximation techniques on suitable subspaces. This framework unifies the proofs for some methods based on pseudospectral discretization, which we present here in this new form. To exemplify the generality of the framework, we also apply it to a method of weighted residuals found in the literature, which was previously lacking a formal convergence analysis.

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Sparse identification of delay equations with distributed memory

We present a novel extension of the SINDy framework to delay differential equations with {\it distributed delays} and {\it renewal equations}, where typically the dependence from the past manifests via integrals in which the history is weighted through specific functions that are in general nonautonomous. Using sparse regression following the application of suitable quadrature formulas, the proposed methodology aims at directly reconstructing these kernel functions, thereby capturing the dynamics of the underlying infinite-dimensional systems. Numerical experiments confirm the effectiveness of the presented approach in identifying accurate and interpretable models, thus advancing data-driven discovery towards systems with distributed memory.

math.DS

Data-driven Methods for Delay Differential Equations

Data-driven methodologies are nowadays ubiquitous. Their rapid development and spread have led to applications even beyond the traditional fields of science. As far as dynamical systems and differential equations are concerned, neural networks and sparse identification tools have emerged as powerful approaches to recover the governing equations from available temporal data series. In this chapter we first illustrate possible extensions of the sparse identification of nonlinear dynamics (SINDy) algorithm, originally developed for ordinary differential equations (ODEs), to delay differential equations (DDEs) with discrete, possibly multiple and unknown delays. Two methods are presented for SINDy, one directly tackles the underlying DDE and the other acts on the system of ODEs approximating the DDE through pseudospectral collocation. We also introduce another way of capturing the dynamics of DDEs using neural networks and trainable delays in continuous time, and present the training algorithms developed for these neural delay differential equations (NDDEs). The relevant MATLAB implementations for both the SINDy approach and for the NDDE approach are provided. These approaches are tested on several examples, including classical systems such as the delay logistic and the Mackey-Glass equation, and directly compared to each other on the delayed R\"ossler system. We provide insights on the connection between the approaches and future directions on developing data-driven methods for time delay systems.

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On the numerical computation of $R_0$ in periodic environments

We propose a novel approach to approximate the basic reproduction number $R_0$ as spectral radius of the Next-Generation Operator in time-periodic population models by characterizing the latter via evolution semigroups. Once birth/infection and transition operators are identified, we discretize them via either Fourier or Chebyshev collocation methods. Then $R_0$ is obtained by solving a generalized matrix eigenvalue problem. The order of convergence of the approximating reproduction numbers to the true one is shown to depend on the regularity of the model coefficients, and spectral accuracy is proved. We validate the theoretical results by discussing applications to epidemiology, viz. a large-size multi-group epidemic model with periodic contact rates, and a vector-borne disease model with seasonal vector recruitment. We illustrate how the method facilitates implementation compared to existing approaches and how it can be easily adapted to also compute type-reproduction numbers.

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Sparse Identification of Nonlinear Dynamics for Stochastic Delay Differential Equations

A general framework for recovering drift and diffusion dynamics from sampled trajectories is presented for the first time for stochastic delay differential equations. The core relies on the well-established SINDy algorithm for the sparse identification of nonlinear dynamics. The proposed methodology combines recently proposed high-order estimates of drift and covariance for dealing with stochastic problems with augmented libraries to handle delayed arguments. Three different strategies are discussed in view of exploiting only realistically available data. A thorough comparative numerical investigation is performed on different models, which helps guiding the choice of effective and possibly outperforming schemes.

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Sparse identification of time delay systems via pseudospectral collocation

We present a pragmatic approach to the sparse identification of nonlinear dynamics for systems with discrete delays. It relies on approximating the underlying delay model with a system of ordinary differential equations via pseudospectral collocation. To minimize the reconstruction error, the new strategy avoids optimizing all possible multiple unknown delays, identifying only the maximum one. The computational burden is thus greatly reduced, improving the performance of recent implementations that work directly on the delay system.

math.DS

Data-driven Discovery of Delay Differential Equations with Discrete Delays

The Sparse Identification of Nonlinear Dynamics (SINDy) framework is a robust method for identifying governing equations, successfully applied to ordinary, partial, and stochastic differential equations. In this work we extend SINDy to identify delay differential equations by using an augmented library that includes delayed samples and Bayesian optimization. To identify a possibly unknown delay we minimize the reconstruction error over a set of candidates. The resulting methodology improves the overall performance by remarkably reducing the number of calls to SINDy with respect to a brute force approach. We also address a multivariate setting to identify multiple unknown delays and (non-multiplicative) parameters. Several numerical tests on delay differential equations with different long-term behavior, number of variables, delays, and parameters support the use of Bayesian optimization highlighting both the efficacy of the proposed methodology and its computational advantages. As a consequence, the class of discoverable models is significantly expanded.

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Lyapunov exponents of renewal equations: numerical approximation and convergence analysis

We propose a numerical method for computing the Lyapunov exponents of renewal equations (delay equations of Volterra type), consisting first in applying a discrete QR technique to the associated evolution family suitably posed on a Hilbert state space and second in reducing to finite dimension each evolution operator in the obtained time sequence. The reduction to finite dimension relies on Fourier projection in the state space and on pseudospectral collocation in the forward time step. A rigorous proof of convergence of both the discretized operators and the approximated exponents is provided. A MATLAB implementation is also included for completeness.

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Viability and control of a delayed SIR epidemic with an ICU state constraint

This paper studies viability and control synthesis for a delayed SIR epidemic. The model integrates a constant delay representing an incubation/latency time. The control inputs model non-pharmaceutical interventions, while an intensive care unit (ICU) state-constraint is introduced to reflect the healthcare system's capacity. The arising delayed control system is analyzed via functional viability tools, providing insights into fulfilling the ICU constraint through feedback control maps. In particular, we consider two scenarios: first, we consider the case of general continuous initial conditions. Then, as a further refinement of our analysis, we assume that the initial conditions satisfy a Lipschitz continuity property, consistent with the considered model. The study compares the (in general, sub-optimal) obtained control policies with the optimal ones for the delay-free case, emphasizing the impact of the delay parameter. The obtained results are supported and illustrated, in a concluding section, by numerical examples.

math.OC

A practical approach to computing Lyapunov exponents of renewal and delay equations

We propose a method for computing the Lyapunov exponents of renewal equations (delay equations of Volterra type) and of coupled systems of renewal and delay differential equations. The method consists in the reformulation of the delay equation as an abstract differential equation, the reduction of the latter to a system of ordinary differential equations via pseudospectral collocation, and the application of the standard discrete QR method. The effectiveness of the method is shown experimentally and a MATLAB implementation is provided.

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Piecewise orthogonal collocation for computing periodic solutions of coupled delay equations

We extend the piecewise orthogonal collocation method to computing periodic solutions of coupled renewal and delay differential equations. Through a rigorous error analysis, we prove convergence of the relevant finite-element method and provide a theoretical estimate of the error. We conclude with some numerical experiments to further support the theoretical results.

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A numerical method for the stability analysis of linear age-structured models with nonlocal diffusion

We numerically address the stability analysis of linear age-structured population models with nonlocal diffusion, which arise naturally in describing dynamics of infectious diseases. Compared to Laplace diffusion, models with nonlocal diffusion are more challenging since the associated semigroups have no regularizing properties in the spatial variable. Nevertheless, the asymptotic stability of the null equilibrium is determined by the spectrum of the infinitesimal generator associated to the semigroup. We propose a numerical method to approximate the leading part of this spectrum by first reformulating the problem via integration of the age-state and then by discretizing the generator combining a spectral projection in space with a pseudospectral collocation in age. A rigorous convergence analysis proving spectral accuracy is provided in the case of separable model coefficients. Results are confirmed experimentally and numerical tests are presented also for the more general instance.

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Spectra of evolution operators of a class of neutral renewal equations: theoretical and numerical aspects

In this work we begin a theoretical and numerical investigation on the spectra of evolution operators of neutral renewal equations, with the stability of equilibria and periodic orbits in mind. We start from the simplest form of linear periodic equation with one discrete delay and fully characterize the spectrum of its monodromy operator. We perform numerical experiments discretizing the evolution operators via pseudospectral collocation, confirming the theoretical results and giving perspectives on the generalization to systems and to multiple delays. Although we do not attempt to perform a rigorous numerical analysis of the method, we give some considerations on a possible approach to the problem.

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A practical guide to piecewise pseudospectral collocation for Floquet multipliers of delay equations in MATLAB

In recent years we provided numerical methods based on pseudospectral collocation for computing the Floquet multipliers of different types of delay equations, with the goal of studying the stability of their periodic solutions. The latest work of the series concerns the extension of these methods to a piecewise approach, in order to take the properties of numerically computed solutions into account. In this chapter we describe the MATLAB implementation of this method and provide practical usage examples.

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Piecewise discretization of monodromy operators of delay equations on adapted meshes

Periodic solutions of delay equations are usually approximated as continuous piecewise polynomials on meshes adapted to the solutions' profile. In practical computations this affects the regularity of the (coefficients of the) linearized system and, in turn, the effectiveness of assessing local stability by approximating the Floquet multipliers. To overcome this problem when computing multipliers by collocation, the discretization grid should include the piecewise adapted mesh of the computed periodic solution. By introducing a piecewise version of existing pseudospectral techniques, we explain why and show experimentally that this choice is essential in presence of either strong mesh adaptation or nontrivial multipliers whose eigenfunctions' profile is unrelated to that of the periodic solution.

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