arXiv subjects

Dustin Tran

Publications and source records attributed to Dustin Tran.

At least 37 records · Page 2Linked to original sources

arXiv2020

Simple and Principled Uncertainty Estimation with Deterministic Deep Learning via Distance Awareness

Bayesian neural networks (BNN) and deep ensembles are principled approaches to estimate the predictive uncertainty of a deep learning model. However their practicality in real-time, industrial-scale applications are limited due to their heavy memory and inference cost. This motivates us to study principled approaches to high-quality uncertainty estimation that require only a single deep neural network (DNN). By formalizing the uncertainty quantification as a minimax learning problem, we first identify input distance awareness, i.e., the model's ability to quantify the distance of a testing example from the training data in the input space, as a necessary condition for a DNN to achieve high-quality (i.e., minimax optimal) uncertainty estimation. We then propose Spectral-normalized Neural Gaussian Process (SNGP), a simple method that improves the distance-awareness ability of modern DNNs, by adding a weight normalization step during training and replacing the output layer with a Gaussian process. On a suite of vision and language understanding tasks and on modern architectures (Wide-ResNet and BERT), SNGP is competitive with deep ensembles in prediction, calibration and out-of-domain detection, and outperforms the other single-model approaches.

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arXiv2020

Efficient and Scalable Bayesian Neural Nets with Rank-1 Factors

Bayesian neural networks (BNNs) demonstrate promising success in improving the robustness and uncertainty quantification of modern deep learning. However, they generally struggle with underfitting at scale and parameter efficiency. On the other hand, deep ensembles have emerged as alternatives for uncertainty quantification that, while outperforming BNNs on certain problems, also suffer from efficiency issues. It remains unclear how to combine the strengths of these two approaches and remediate their common issues. To tackle this challenge, we propose a rank-1 parameterization of BNNs, where each weight matrix involves only a distribution on a rank-1 subspace. We also revisit the use of mixture approximate posteriors to capture multiple modes, where unlike typical mixtures, this approach admits a significantly smaller memory increase (e.g., only a 0.4% increase for a ResNet-50 mixture of size 10). We perform a systematic empirical study on the choices of prior, variational posterior, and methods to improve training. For ResNet-50 on ImageNet, Wide ResNet 28-10 on CIFAR-10/100, and an RNN on MIMIC-III, rank-1 BNNs achieve state-of-the-art performance across log-likelihood, accuracy, and calibration on the test sets and out-of-distribution variants.

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arXiv2020

Measuring Calibration in Deep Learning

Overconfidence and underconfidence in machine learning classifiers is measured by calibration: the degree to which the probabilities predicted for each class match the accuracy of the classifier on that prediction. How one measures calibration remains a challenge: expected calibration error, the most popular metric, has numerous flaws which we outline, and there is no clear empirical understanding of how its choices affect conclusions in practice, and what recommendations there are to counteract its flaws. In this paper, we perform a comprehensive empirical study of choices in calibration measures including measuring all probabilities rather than just the maximum prediction, thresholding probability values, class conditionality, number of bins, bins that are adaptive to the datapoint density, and the norm used to compare accuracies to confidences. To analyze the sensitivity of calibration measures, we study the impact of optimizing directly for each variant with recalibration techniques. Across MNIST, Fashion MNIST, CIFAR-10/100, and ImageNet, we find that conclusions on the rank ordering of recalibration methods is drastically impacted by the choice of calibration measure. We find that conditioning on the class leads to more effective calibration evaluations, and that using the L2 norm rather than the L1 norm improves both optimization for calibration metrics and the rank correlation measuring metric consistency. Adaptive binning schemes lead to more stablity of metric rank ordering when the number of bins vary, and is also recommended. We open source a library for the use of our calibration measures.

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arXiv2020

Analyzing the Role of Model Uncertainty for Electronic Health Records

In medicine, both ethical and monetary costs of incorrect predictions can be significant, and the complexity of the problems often necessitates increasingly complex models. Recent work has shown that changing just the random seed is enough for otherwise well-tuned deep neural networks to vary in their individual predicted probabilities. In light of this, we investigate the role of model uncertainty methods in the medical domain. Using RNN ensembles and various Bayesian RNNs, we show that population-level metrics, such as AUC-PR, AUC-ROC, log-likelihood, and calibration error, do not capture model uncertainty. Meanwhile, the presence of significant variability in patient-specific predictions and optimal decisions motivates the need for capturing model uncertainty. Understanding the uncertainty for individual patients is an area with clear clinical impact, such as determining when a model decision is likely to be brittle. We further show that RNNs with only Bayesian embeddings can be a more efficient way to capture model uncertainty compared to ensembles, and we analyze how model uncertainty is impacted across individual input features and patient subgroups.

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arXiv2020

BatchEnsemble: An Alternative Approach to Efficient Ensemble and Lifelong Learning

Ensembles, where multiple neural networks are trained individually and their predictions are averaged, have been shown to be widely successful for improving both the accuracy and predictive uncertainty of single neural networks. However, an ensemble's cost for both training and testing increases linearly with the number of networks, which quickly becomes untenable. In this paper, we propose BatchEnsemble, an ensemble method whose computational and memory costs are significantly lower than typical ensembles. BatchEnsemble achieves this by defining each weight matrix to be the Hadamard product of a shared weight among all ensemble members and a rank-one matrix per member. Unlike ensembles, BatchEnsemble is not only parallelizable across devices, where one device trains one member, but also parallelizable within a device, where multiple ensemble members are updated simultaneously for a given mini-batch. Across CIFAR-10, CIFAR-100, WMT14 EN-DE/EN-FR translation, and out-of-distribution tasks, BatchEnsemble yields competitive accuracy and uncertainties as typical ensembles; the speedup at test time is 3X and memory reduction is 3X at an ensemble of size 4. We also apply BatchEnsemble to lifelong learning, where on Split-CIFAR-100, BatchEnsemble yields comparable performance to progressive neural networks while having a much lower computational and memory costs. We further show that BatchEnsemble can easily scale up to lifelong learning on Split-ImageNet which involves 100 sequential learning tasks.

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arXiv2020

On the Discrepancy between Density Estimation and Sequence Generation

Many sequence-to-sequence generation tasks, including machine translation and text-to-speech, can be posed as estimating the density of the output y given the input x: p(y|x). Given this interpretation, it is natural to evaluate sequence-to-sequence models using conditional log-likelihood on a test set. However, the goal of sequence-to-sequence generation (or structured prediction) is to find the best output y^ given an input x, and each task has its own downstream metric R that scores a model output by comparing against a set of references y*: R(y^, y* | x). While we hope that a model that excels in density estimation also performs well on the downstream metric, the exact correlation has not been studied for sequence generation tasks. In this paper, by comparing several density estimators on five machine translation tasks, we find that the correlation between rankings of models based on log-likelihood and BLEU varies significantly depending on the range of the model families being compared. First, log-likelihood is highly correlated with BLEU when we consider models within the same family (e.g. autoregressive models, or latent variable models with the same parameterization of the prior). However, we observe no correlation between rankings of models across different families: (1) among non-autoregressive latent variable models, a flexible prior distribution is better at density estimation but gives worse generation quality than a simple prior, and (2) autoregressive models offer the best translation performance overall, while latent variable models with a normalizing flow prior give the highest held-out log-likelihood across all datasets. Therefore, we recommend using a simple prior for the latent variable non-autoregressive model when fast generation speed is desired.

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arXiv2019

Expectation propagation as a way of life: A framework for Bayesian inference on partitioned data

A common divide-and-conquer approach for Bayesian computation with big data is to partition the data, perform local inference for each piece separately, and combine the results to obtain a global posterior approximation. While being conceptually and computationally appealing, this method involves the problematic need to also split the prior for the local inferences; these weakened priors may not provide enough regularization for each separate computation, thus eliminating one of the key advantages of Bayesian methods. To resolve this dilemma while still retaining the generalizability of the underlying local inference method, we apply the idea of expectation propagation (EP) as a framework for distributed Bayesian inference. The central idea is to iteratively update approximations to the local likelihoods given the state of the other approximations and the prior. The present paper has two roles: we review the steps that are needed to keep EP algorithms numerically stable, and we suggest a general approach, inspired by EP, for approaching data partitioning problems in a way that achieves the computational benefits of parallelism while allowing each local update to make use of relevant information from the other sites. In addition, we demonstrate how the method can be applied in a hierarchical context to make use of partitioning of both data and parameters. The paper describes a general algorithmic framework, rather than a specific algorithm, and presents an example implementation for it.

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arXiv2019

Noise Contrastive Priors for Functional Uncertainty

Obtaining reliable uncertainty estimates of neural network predictions is a long standing challenge. Bayesian neural networks have been proposed as a solution, but it remains open how to specify their prior. In particular, the common practice of an independent normal prior in weight space imposes relatively weak constraints on the function posterior, allowing it to generalize in unforeseen ways on inputs outside of the training distribution. We propose noise contrastive priors (NCPs) to obtain reliable uncertainty estimates. The key idea is to train the model to output high uncertainty for data points outside of the training distribution. NCPs do so using an input prior, which adds noise to the inputs of the current mini batch, and an output prior, which is a wide distribution given these inputs. NCPs are compatible with any model that can output uncertainty estimates, are easy to scale, and yield reliable uncertainty estimates throughout training. Empirically, we show that NCPs prevent overfitting outside of the training distribution and result in uncertainty estimates that are useful for active learning. We demonstrate the scalability of our method on the flight delays data set, where we significantly improve upon previously published results.

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arXiv2019

Discrete Flows: Invertible Generative Models of Discrete Data

While normalizing flows have led to significant advances in modeling high-dimensional continuous distributions, their applicability to discrete distributions remains unknown. In this paper, we show that flows can in fact be extended to discrete events---and under a simple change-of-variables formula not requiring log-determinant-Jacobian computations. Discrete flows have numerous applications. We consider two flow architectures: discrete autoregressive flows that enable bidirectionality, allowing, for example, tokens in text to depend on both left-to-right and right-to-left contexts in an exact language model; and discrete bipartite flows that enable efficient non-autoregressive generation as in RealNVP. Empirically, we find that discrete autoregressive flows outperform autoregressive baselines on synthetic discrete distributions, an addition task, and Potts models; and bipartite flows can obtain competitive performance with autoregressive baselines on character-level language modeling for Penn Tree Bank and text8.

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arXiv2019

NeuTra-lizing Bad Geometry in Hamiltonian Monte Carlo Using Neural Transport

Hamiltonian Monte Carlo is a powerful algorithm for sampling from difficult-to-normalize posterior distributions. However, when the geometry of the posterior is unfavorable, it may take many expensive evaluations of the target distribution and its gradient to converge and mix. We propose neural transport (NeuTra) HMC, a technique for learning to correct this sort of unfavorable geometry using inverse autoregressive flows (IAF), a powerful neural variational inference technique. The IAF is trained to minimize the KL divergence from an isotropic Gaussian to the warped posterior, and then HMC sampling is performed in the warped space. We evaluate NeuTra HMC on a variety of synthetic and real problems, and find that it significantly outperforms vanilla HMC both in time to reach the stationary distribution and asymptotic effective-sample-size rates.

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arXiv2019

Bayesian Layers: A Module for Neural Network Uncertainty

We describe Bayesian Layers, a module designed for fast experimentation with neural network uncertainty. It extends neural network libraries with drop-in replacements for common layers. This enables composition via a unified abstraction over deterministic and stochastic functions and allows for scalability via the underlying system. These layers capture uncertainty over weights (Bayesian neural nets), pre-activation units (dropout), activations ("stochastic output layers"), or the function itself (Gaussian processes). They can also be reversible to propagate uncertainty from input to output. We include code examples for common architectures such as Bayesian LSTMs, deep GPs, and flow-based models. As demonstration, we fit a 5-billion parameter "Bayesian Transformer" on 512 TPUv2 cores for uncertainty in machine translation and a Bayesian dynamics model for model-based planning. Finally, we show how Bayesian Layers can be used within the Edward2 probabilistic programming language for probabilistic programs with stochastic processes.

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arXiv2018

Simple, Distributed, and Accelerated Probabilistic Programming

We describe a simple, low-level approach for embedding probabilistic programming in a deep learning ecosystem. In particular, we distill probabilistic programming down to a single abstraction---the random variable. Our lightweight implementation in TensorFlow enables numerous applications: a model-parallel variational auto-encoder (VAE) with 2nd-generation tensor processing units (TPUv2s); a data-parallel autoregressive model (Image Transformer) with TPUv2s; and multi-GPU No-U-Turn Sampler (NUTS). For both a state-of-the-art VAE on 64x64 ImageNet and Image Transformer on 256x256 CelebA-HQ, our approach achieves an optimal linear speedup from 1 to 256 TPUv2 chips. With NUTS, we see a 100x speedup on GPUs over Stan and 37x over PyMC3.

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arXiv2018

Autoconj: Recognizing and Exploiting Conjugacy Without a Domain-Specific Language

Deriving conditional and marginal distributions using conjugacy relationships can be time consuming and error prone. In this paper, we propose a strategy for automating such derivations. Unlike previous systems which focus on relationships between pairs of random variables, our system (which we call Autoconj) operates directly on Python functions that compute log-joint distribution functions. Autoconj provides support for conjugacy-exploiting algorithms in any Python embedded PPL. This paves the way for accelerating development of novel inference algorithms and structure-exploiting modeling strategies.

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arXiv2018

Mesh-TensorFlow: Deep Learning for Supercomputers

Batch-splitting (data-parallelism) is the dominant distributed Deep Neural Network (DNN) training strategy, due to its universal applicability and its amenability to Single-Program-Multiple-Data (SPMD) programming. However, batch-splitting suffers from problems including the inability to train very large models (due to memory constraints), high latency, and inefficiency at small batch sizes. All of these can be solved by more general distribution strategies (model-parallelism). Unfortunately, efficient model-parallel algorithms tend to be complicated to discover, describe, and to implement, particularly on large clusters. We introduce Mesh-TensorFlow, a language for specifying a general class of distributed tensor computations. Where data-parallelism can be viewed as splitting tensors and operations along the "batch" dimension, in Mesh-TensorFlow, the user can specify any tensor-dimensions to be split across any dimensions of a multi-dimensional mesh of processors. A Mesh-TensorFlow graph compiles into a SPMD program consisting of parallel operations coupled with collective communication primitives such as Allreduce. We use Mesh-TensorFlow to implement an efficient data-parallel, model-parallel version of the Transformer sequence-to-sequence model. Using TPU meshes of up to 512 cores, we train Transformer models with up to 5 billion parameters, surpassing state of the art results on WMT'14 English-to-French translation task and the one-billion-word language modeling benchmark. Mesh-Tensorflow is available at https://github.com/tensorflow/mesh .

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arXiv2018

Image Transformer

Image generation has been successfully cast as an autoregressive sequence generation or transformation problem. Recent work has shown that self-attention is an effective way of modeling textual sequences. In this work, we generalize a recently proposed model architecture based on self-attention, the Transformer, to a sequence modeling formulation of image generation with a tractable likelihood. By restricting the self-attention mechanism to attend to local neighborhoods we significantly increase the size of images the model can process in practice, despite maintaining significantly larger receptive fields per layer than typical convolutional neural networks. While conceptually simple, our generative models significantly outperform the current state of the art in image generation on ImageNet, improving the best published negative log-likelihood on ImageNet from 3.83 to 3.77. We also present results on image super-resolution with a large magnification ratio, applying an encoder-decoder configuration of our architecture. In a human evaluation study, we find that images generated by our super-resolution model fool human observers three times more often than the previous state of the art.

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arXiv2018

Flipout: Efficient Pseudo-Independent Weight Perturbations on Mini-Batches

Stochastic neural net weights are used in a variety of contexts, including regularization, Bayesian neural nets, exploration in reinforcement learning, and evolution strategies. Unfortunately, due to the large number of weights, all the examples in a mini-batch typically share the same weight perturbation, thereby limiting the variance reduction effect of large mini-batches. We introduce flipout, an efficient method for decorrelating the gradients within a mini-batch by implicitly sampling pseudo-independent weight perturbations for each example. Empirically, flipout achieves the ideal linear variance reduction for fully connected networks, convolutional networks, and RNNs. We find significant speedups in training neural networks with multiplicative Gaussian perturbations. We show that flipout is effective at regularizing LSTMs, and outperforms previous methods. Flipout also enables us to vectorize evolution strategies: in our experiments, a single GPU with flipout can handle the same throughput as at least 40 CPU cores using existing methods, equivalent to a factor-of-4 cost reduction on Amazon Web Services.

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arXiv2018

Operator Variational Inference

Variational inference is an umbrella term for algorithms which cast Bayesian inference as optimization. Classically, variational inference uses the Kullback-Leibler divergence to define the optimization. Though this divergence has been widely used, the resultant posterior approximation can suffer from undesirable statistical properties. To address this, we reexamine variational inference from its roots as an optimization problem. We use operators, or functions of functions, to design variational objectives. As one example, we design a variational objective with a Langevin-Stein operator. We develop a black box algorithm, operator variational inference (OPVI), for optimizing any operator objective. Importantly, operators enable us to make explicit the statistical and computational tradeoffs for variational inference. We can characterize different properties of variational objectives, such as objectives that admit data subsampling---allowing inference to scale to massive data---as well as objectives that admit variational programs---a rich class of posterior approximations that does not require a tractable density. We illustrate the benefits of OPVI on a mixture model and a generative model of images.

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arXiv2017

TensorFlow Distributions

The TensorFlow Distributions library implements a vision of probability theory adapted to the modern deep-learning paradigm of end-to-end differentiable computation. Building on two basic abstractions, it offers flexible building blocks for probabilistic computation. Distributions provide fast, numerically stable methods for generating samples and computing statistics, e.g., log density. Bijectors provide composable volume-tracking transformations with automatic caching. Together these enable modular construction of high dimensional distributions and transformations not possible with previous libraries (e.g., pixelCNNs, autoregressive flows, and reversible residual networks). They are the workhorse behind deep probabilistic programming systems like Edward and empower fast black-box inference in probabilistic models built on deep-network components. TensorFlow Distributions has proven an important part of the TensorFlow toolkit within Google and in the broader deep learning community.

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