arXiv subjects

Edwin Henneken

Publications and source records attributed to Edwin Henneken.

16 recordsLinked to original sources

arXiv2022

Improving astroBERT using Semantic Textual Similarity

The NASA Astrophysics Data System (ADS) is an essential tool for researchers that allows them to explore the astronomy and astrophysics scientific literature, but it has yet to exploit recent advances in natural language processing. At ADASS 2021, we introduced astroBERT, a machine learning language model tailored to the text used in astronomy papers in ADS. In this work we: - announce the first public release of the astroBERT language model; - show how astroBERT improves over existing public language models on astrophysics specific tasks; - and detail how ADS plans to harness the unique structure of scientific papers, the citation graph and citation context, to further improve astroBERT.

cs.CL↗

arXiv2022

Web accessibility trends and implementation in dynamic web applications

The NASA Astrophysics Data System (ADS), a critical research service for the astrophysics community, strives to provide the most accessible and inclusive environment for the discovery and exploration of the astronomical literature. Part of this goal involves creating a digital platform that can accommodate everybody, including those with disabilities that would benefit from alternative ways to present the information provided by the website. NASA ADS follows the official Web Content Accessibility Guidelines (WCAG) standard for ensuring accessibility of all its applications, striving to exceed this standard where possible. Through the use of both internal audits and external expert review based on these guidelines, we have identified many areas for improving accessibility in our current web application, and have implemented a number of updates to the UI as a result of this. We present an overview of some current web accessibility trends, discuss our experience incorporating these trends in our web application, and discuss the lessons learned and recommendations for future projects.

cs.HC↗

arXiv2021

Building astroBERT, a language model for Astronomy & Astrophysics

The existing search tools for exploring the NASA Astrophysics Data System (ADS) can be quite rich and empowering (e.g., similar and trending operators), but researchers are not yet allowed to fully leverage semantic search. For example, a query for "results from the Planck mission" should be able to distinguish between all the various meanings of Planck (person, mission, constant, institutions and more) without further clarification from the user. At ADS, we are applying modern machine learning and natural language processing techniques to our dataset of recent astronomy publications to train astroBERT, a deeply contextual language model based on research at Google. Using astroBERT, we aim to enrich the ADS dataset and improve its discoverability, and in particular we are developing our own named entity recognition tool. We present here our preliminary results and lessons learned.

cs.CL↗

arXiv2020

Agile methodologies in teams with highly creative and autonomous members

The Agile manifesto encourages us to value individuals and interactions over processes and tools, while Scrum, the most adopted Agile development methodology, is essentially based on roles, events, artifacts, and the rules that bind them together (i.e., processes). Moreover, it is generally proclaimed that whenever a Scrum project does not succeed, the reason is because Scrum was not implemented correctly and not because Scrum may have its own flaws. This grants irrefutability to the methodology, discouraging deviations to fit the actual needs and peculiarities of the developers. In particular, the members of the NASA ADS team are highly creative and autonomous whose motivation can be affected if their freedom is too strongly constrained. We present our experience following Agile principles, reusing certain Scrum elements and seeking the satisfaction of the team members, while rapidly reacting/keeping the project in line with our stakeholders expectations.

cs.SE↗

arXiv2019

Practice meets Principle: Tracking Software and Data Citations to Zenodo DOIs

Data and software citations are crucial for the transparency of research results and for the transmission of credit. But they are hard to track, because of the absence of a common citation standard. As a consequence, the FORCE11 recently proposed data and software citation principles as guidance for authors. Zenodo is recognized for the implementation of DOIs for software on a large scale. The minting of complementary DOIs for the version and concept allows measuring the impact of dynamic software. This article investigates characteristics of 5,456 citations to Zenodo data and software that were captured by the Asclepias Broker in January 2019. We analyzed the current state of data and software citation practices and the quality of software citation recommendations with regard to the impact of recent standardization efforts. Our findings prove that current citation practices and recommendations do not match proposed citation standards. We consequently suggest practical first steps towards the implementation of the software citation principles.

cs.DL↗

arXiv2019

Software Citation Implementation Challenges

The main output of the FORCE11 Software Citation working group (https://www.force11.org/group/software-citation-working-group) was a paper on software citation principles (https://doi.org/10.7717/peerj-cs.86) published in September 2016. This paper laid out a set of six high-level principles for software citation (importance, credit and attribution, unique identification, persistence, accessibility, and specificity) and discussed how they could be used to implement software citation in the scholarly community. In a series of talks and other activities, we have promoted software citation using these increasingly accepted principles. At the time the initial paper was published, we also provided guidance and examples on how to make software citable, though we now realize there are unresolved problems with that guidance. The purpose of this document is to provide an explanation of current issues impacting scholarly attribution of research software, organize updated implementation guidance, and identify where best practices and solutions are still needed.

cs.CY↗

arXiv2019

Fundamentals of effective cloud management for the new NASA Astrophysics Data System

The new NASA Astrophysics Data System (ADS) is designed with a serviceoriented architecture (SOA) that consists of multiple customized Apache Solr search engine instances plus a collection of microservices, containerized using Docker, and deployed in Amazon Web Services (AWS). For complex systems, like the ADS, this loosely coupled architecture can lead to a more scalable, reliable and resilient system if some fundamental questions are addressed. After having experimented with different AWS environments and deployment methods, we decided in December 2017 to go with Kubernetes as our container orchestration. Defining the best strategy to properly setup Kubernetes has shown to be challenging: automatic scaling services and load balancing traffic can lead to errors whose origin is difficult to identify, monitoring and logging the activity that happens across multiple layers for a single request needs to be carefully addressed, and the best workflow for a Continuous Integration and Delivery (CI/CD) system is not self-evident. We present here how we tackle these challenges and our plans for the future.

astro-ph.IM↗

arXiv2012

Telescope Bibliographies: an Essential Component of Archival Data Management and Operations

Assessing the impact of astronomical facilities rests upon an evaluation of the scientific discoveries which their data have enabled. Telescope bibliographies, which link data products with the literature, provide a way to use bibliometrics as an impact measure for the underlying data. In this paper we argue that the creation and maintenance of telescope bibliographies should be considered an integral part of an observatory's operations. We review the existing tools, services, and workflows which support these curation activities, giving an estimate of the effort and expertise required to maintain an archive-based telescope bibliography.

astro-ph.IM↗

arXiv2009

Using Multipartite Graphs for Recommendation and Discovery

The Smithsonian/NASA Astrophysics Data System exists at the nexus of a dense system of interacting and interlinked information networks. The syntactic and the semantic content of this multipartite graph structure can be combined to provide very specific research recommendations to the scientist/user.

astro-ph.IM↗

arXiv2006

Data in the ADS -- Understanding How to Use it Better

The Smithsonian/NASA ADS Abstract Service contains a wealth of data for astronomers and librarians alike, yet the vast majority of usage consists of rudimentary searches. Hints on how to obtain more focused search results by using more of the various capabilities of the ADS are presented, including searching by affiliation. We also discuss the classification of articles by content and by referee status. The ADS is funded by NASA Grant NNG06GG68G-16613687.

cs.DL↗

arXiv2006

Paper to Screen: Processing Historical Scans in the ADS

The NASA Astrophysics Data System in conjunction with the Wolbach Library at the Harvard-Smithsonian Center for Astrophysics is working on a project to microfilm historical observatory publications. The microfilm is then scanned for inclusion in the ADS. The ADS currently contains over 700,000 scanned pages of volumes of historical literature. Many of these volumes lack clear pagination or other bibliographic data that are necessary to take advantage of the searching capabilities of the ADS. This paper will address some of the interesting challenges that needed to be resolved during the processing of the Observatory Reports included in the ADS.

cs.DL↗

arXiv2006

Creation and use of Citations in the ADS

With over 20 million records, the ADS citation database is regularly used by researchers and librarians to measure the scientific impact of individuals, groups, and institutions. In addition to the traditional sources of citations, the ADS has recently added references extracted from the arXiv e-prints on a nightly basis. We review the procedures used to harvest and identify the reference data used in the creation of citations, the policies and procedures that we follow to avoid double-counting and to eliminate contributions which may not be scholarly in nature. Finally, we describe how users and institutions can easily obtain quantitative citation data from the ADS, both interactively and via web-based programming tools. The ADS is available at http://ads.harvard.edu.

cs.DL↗

arXiv2006

The Future of Technical Libraries

Technical libraries are currently experiencing very rapid change. In the near future their mission will change, their physical nature will change, and the skills of their employees will change. While some will not be able to make these changes, and will fail, others will lead us into a new era.

astro-ph↗

arXiv2005

Intelligent Information Retrieval

Since it was first announced at ADASS 2 the Smithsonian/NASA Astrophysics System Abstract Service (ADS) has played a central role in the information seeking behavior of astronomers. Central to the ability of the ADS to act as a search and discovery tool is its role as metadata agregator. Over the past 13 years the ADS has introduced many new techniques to facilitate information retrieval, broadly defined. We discuss some of these developments; with particular attention to how the ADS might interact with the virtual observatory, and to the new myADS-arXiv customized open access virtual journal. The ADS is at http://ads.harvard.edu

astro-ph↗

arXiv2005

Bibliographic Classification using the ADS Databases

We discuss two techniques used to characterize bibliographic records based on their similarity to and relationship with the contents of the NASA Astrophysics Data System (ADS) databases. The first method has been used to classify input text as being relevant to one or more subject areas based on an analysis of the frequency distribution of its individual words. The second method has been used to classify existing records as being relevant to one or more databases based on the distribution of the papers citing them. Both techniques have proven to be valuable tools in assigning new and existing bibliographic records to different disciplines within the ADS databases.

cs.IR↗

arXiv2005

The Effect of Use and Access on Citations

It has been shown (S. Lawrence, 2001, Nature, 411, 521) that journal articles which have been posted without charge on the internet are more heavily cited than those which have not been. Using data from the NASA Astrophysics Data System (ads.harvard.edu) and from the ArXiv e-print archive at Cornell University (arXiv.org) we examine the causes of this effect.

cs.DL↗