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Elena Ballante

Publications and source records attributed to Elena Ballante.

4 recordsLinked to original sources

Explainable cluster analysis: a bagging approach

A major limitation of clustering approaches is their lack of explainability: methods rarely provide insight into which features drive the grouping of similar observations. To address this limitation, we propose an ensemble-based clustering framework that integrates bagging and feature dropout to generate feature importance scores, in analogy with feature importance mechanisms in supervised random forests. By leveraging multiple bootstrap resampling schemes and aggregating the resulting partitions, the method improves stability and robustness of the cluster definition, particularly in small-sample or noisy settings. Feature importance is assessed through an information-theoretic approach: at each step, the mutual information between each feature and the estimated cluster labels is computed and weighted by a measure of clustering validity to emphasize well-formed partitions, before being aggregated into a final score. The method outputs both a consensus partition and a corresponding measure of feature importance, enabling a unified interpretation of clustering structure and variable relevance. Its effectiveness is demonstrated on multiple simulated and real-world datasets.

stat.ML

Predictability of viral load dynamics in the early phases of SARS-CoV-2 through a model-based approach

A pipeline to evaluate the evolution of viral dynamics based on a new model-driven approach has been developed in the present study. The proposed methods exploit real data and the multiscale structure of the infection dynamics to provide robust predictions of the epidemic dynamics. We focus on viral load kinetics whose dynamical features are typically available in the symptomatic stage of the infection. Hence, the epidemiological evolution is obtained by relying on a compartmental approach characterized by a varying infection rate to estimate early-stage viral load dynamics, of which few data are available. We test the proposed approach with real data of SARS-CoV-2 viral load kinetics collected from patients living in an Italian province. The considered database refers to early-phase infections, whose viral load kinetics have not been affected by the mass vaccination policies in Italy.

q-bio.PE

Generalized Bayesian Ensemble Survival Tree (GBEST) model

This paper proposes a new class of predictive models for survival analysis called Generalized Bayesian Ensemble Survival Tree (GBEST). It is well known that survival analysis poses many different challenges, in particular when applied to small data or censorship mechanism. Our contribution is the proposal of an ensemble approach that uses Bayesian bootstrap and beta Stacy bootstrap methods to improve the outcome in survival application with a special focus on small datasets. More precisely, a novel approach to integrate Beta Stacy Bayesian bootstrap in bagging tree models for censored data is proposed in this paper. Empirical evidence achieved on simulated and real data underlines that our approach performs better in terms of predictive performances and stability of the results compared with classical survival models available in the literature. In terms of methodology our novel contribution considers the adaptation of recent Bayesian ensemble approaches to survival data, providing a new model called Generalized Bayesian Ensemble Survival Tree (GBEST). A further result in terms of computational novelty is the implementation in R of GBEST, available in a public GitHub repository.

stat.ME

A new approach in model selection for ordinal target variables

This paper introduces a novel approach to assess model performance for predictive models characterized by an ordinal target variable in order to satisfy the lack of suitable tools in this framework. Our methodological proposal is a new index for model assessment which satisfies mathematical properties and can be easily computed. In order to show how our performance indicator works, empirical evidence achieved on a toy examples and simulated data are provided. On the basis of results at hand, we underline that our approach discriminates better for model selection with respect to performance indexes proposed in the literature.

stat.ME