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Elisa Duarte

Publications and source records attributed to Elisa Duarte.

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Spatially varying distributed lag non-linear models using Laplacian P-splines

Although distributed lag non-linear models (DLNMs) are commonly used to quantify delayed and non-linear exposure-response relationships, most existing applications assume that these relationships are constant across space. However, in many geographical and environmental studies, local characteristics vary substantially across areas, making a spatially varying effect more realistic. Extending DLNMs to allow for spatial heterogeneity remains challenging, and only a limited number of modelling strategies have been proposed in literature. The most popular extension is a two-stage meta-analysis approach, which requires sufficiently large sample sizes at each location. Therefore, its usefulness is limited when working with sparse count data in small area data analyses. Although a number of alternative one-stage approaches have been introduced, their computational burden restricts their applicability in real-life data applications. In this paper, we introduce a computationally efficient Bayesian one-stage spatially-varying DLNM for count data. We define four model variants, differing in the assumed spatial dependence structure and the flexibility of the DLNM spline specification. To address the computational burden typically associated with these flexible models, we use Laplace approximations, offering an efficient alternative to classically used Markov Chain Monte Carlo (MCMC) approaches. Model comparison criteria are provided to facilitate the selection of a suitable model in a real-life data application. The proposed methods are evaluated through simulation studies, and their practical usefulness is illustrated through a real-life data application, investigating the temperature-mortality relationship in every municipality of Sicily, Italy.

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Distributed lag non-linear models with spatial effect modification using Laplacian P-splines

Distributed lag non-linear models (DLNMs) are a popular approach to flexibly model the effect of time-delayed exposures. Classical DLNMs specify a common exposure-lag-response relationship across geographical areas. However, this relationship might be altered by an effect modifier that differs between spatial units. Although some methods have been proposed to account for effect modification, their applicability is context-dependent. For example, a meta-analysis can account for heterogeneity between groups, but this technique requires sufficiently large study groups. This limitation is particularly relevant when working with count data, where small numbers of events are often encountered. In this paper, we review existing methods that allow for spatial effect modification for count-based outcomes and propose a Bayesian DLNM alternative method that accounts for the modifier through flexible interaction effects. Through the use of Laplacian P-splines, we provide a computationally fast estimation procedure by avoiding the use of classical Markov Chain Monte Carlo (MCMC) approaches. The performance of the different methods is evaluated through simulation studies. Moreover, the practical applicability of our proposed method is showcased through a data application, containing daily temperature and mortality count data in 87 Italian cities.

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A Bayesian Geoadditive Model for Spatial Disaggregation

We present a novel Bayesian spatial disaggregation model for count data, providing fast and flexible inference at high resolution. First, it incorporates non-linear covariate effects using penalized splines, a flexible approach that is not typically included in existing spatial disaggregation methods. Additionally, it employs a spline-based low-rank kriging approximation for modeling spatial dependencies. The use of Laplace approximation provides computational advantages over traditional Markov Chain Monte Carlo (MCMC) approaches, facilitating scalability to large datasets. We explore two estimation strategies: one using the exact likelihood and another leveraging a spatially discrete approximation for enhanced computational efficiency. Simulation studies demonstrate that both methods perform well, with the approximate method offering significant computational gains. We illustrate the applicability of our model by disaggregating disease rates in the United Kingdom and Belgium, showcasing its potential for generating high-resolution risk maps. By combining flexibility in covariate modeling, computational efficiency and ease of implementation, our approach offers a practical and effective framework for spatial disaggregation.

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Distributed lag non-linear models with Laplacian-P-splines for analysis of spatially structured time series

Distributed lag non-linear models (DLNM) have gained popularity for modeling nonlinear lagged relationships between exposures and outcomes. When applied to spatially referenced data, these models must account for spatial dependence, a challenge that has yet to be thoroughly explored within the penalized DLNM framework. This gap is mainly due to the complex model structure and high computational demands, particularly when dealing with large spatio-temporal datasets. To address this, we propose a novel Bayesian DLNM-Laplacian-P-splines (DLNM-LPS) approach that incorporates spatial dependence using conditional autoregressive (CAR) priors, a method commonly applied in disease mapping. Our approach offers a flexible framework for capturing nonlinear associations while accounting for spatial dependence. It uses the Laplace approximation to approximate the conditional posterior distribution of the regression parameters, eliminating the need for Markov chain Monte Carlo (MCMC) sampling, often used in Bayesian inference, thus improving computational efficiency. The methodology is evaluated through simulation studies and applied to analyze the relationship between temperature and mortality in London.

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