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Emanuele Telari

Publications and source records attributed to Emanuele Telari.

4 recordsLinked to original sources

Bayesian Neural Networks versus deep ensembles for uncertainty quantification in machine learning interatomic potentials

Neural-network-based machine learning interatomic potentials have emerged as powerful tools for predicting atomic energies and forces, enabling accurate and efficient simulations in atomistic modeling. A key limitation of traditional deep learning approaches, however, is their inability to provide reliable estimates of predictive uncertainty. Such uncertainty quantification is critical for assessing model reliability, especially in materials science, where often the model is applied on out-of-distribution data. Different strategies have been proposed to address this challenge, with deep ensembles and Bayesian neural networks being among the most widely used. In this work, we introduce an implementation of Bayesian neural networks with variational inference in the aenet-PyTorch framework. To evaluate their applicability to machine learning interatomic potentials, we systematically compare the performance of variational BNNs and deep ensembles on a dataset of 7,815 TiO$_{2}$ structures. The models are trained on both the full dataset and a subset to assess how variations in data representation influence predictive accuracy and uncertainty estimation. This analysis provides insights into the strengths and limitations of each approach, offering practical guidance for the development of uncertainty-aware machine learning interatomic potentials.

physics.chem-ph

Structural Chart of Copper-Silver Nanoalloys through machine learning

Nanoalloys (or alloy nanoparticles) are an important class of materials that are promising for their functional properties. However, designing synthesis protocols to control their structure and chemical ordering is rather challenging. Part of this difficulty stems from the lack of information on their metastable and stable structures. Here, we develop a general computational framework to construct a structural chart of nanoalloys using 38-atom AgCu nanoalloys as a model system. Initially, the equilibrium structural distribution is sampled using parallel tempering combined with molecular dynamics (PTMD). Using a machine learning (ML) based approach, the vast number of sampled configurations are classified into various structural classes. This ML approach produces a single three-dimensional map in which all structures and compositions can be visualized and discriminated. Finally, a finite-temperature structural chart is constructed which provides information on the dominant structures across the entire range of compositions and temperatures. In addition, the structural chart reveals significant differences in thermal stability between nanoalloys and bulk alloys. The presented framework provides an effective route to compute and map the vast structural and chemical space of multicomponent nanoparticles, paving the way to the rational design of functional nanoalloys.

cond-mat.mtrl-sci

Inherent structural descriptors via machine learning

Finding proper collective variables for complex systems and processes is one of the most challenging tasks in simulations, which limits the interpretation of experimental and simulated data and the application of enhanced sampling techniques. Here, we propose a machine learning approach able to distill few, physically relevant variables by associating instantaneous configurations of the system to their corresponding inherent structures as defined in liquids theory. We apply this approach to the challenging case of structural transitions in nanoclusters, managing to characterize and explore the structural complexity of an experimentally relevant system constituted by 147 gold atoms. Our inherent-structure variables are shown to be effective at computing complex free-energy landscapes, transition rates, and at describing non-equilibrium melting and freezing processes. The effectiveness of this machine learning strategy guided by the generally-applicable concept of inherent structures shows promise to devise collective variables for a vast range of systems, including liquids, glasses, and proteins.

physics.comp-ph

Charting nanocluster structures via convolutional neural networks

A general method to obtain a representation of the structural landscape of nanoparticles in terms of a limited number of variables is proposed. The method is applied to a large dataset of parallel tempering molecular dynamics simulations of gold clusters of 90 and 147 atoms, silver clusters of 147 atoms, and copper clusters of 147 atoms, covering a plethora of structures and temperatures. The method leverages convolutional neural networks to learn the radial distribution functions of the nanoclusters and to distill a low-dimensional chart of the structural landscape. This strategy is found to give rise to a physically meaningful and differentiable mapping of the atom positions to a low-dimensional manifold, in which the main structural motifs are clearly discriminated and meaningfully ordered. Furthermore, unsupervised clustering on the low-dimensional data proved effective at further splitting the motifs into structural subfamilies characterized by very fine and physically relevant differences, such as the presence of specific punctual or planar defects or of atoms with particular coordination features. Owing to these peculiarities, the chart also enabled tracking of the complex structural evolution in a reactive trajectory. In addition to visualization and analysis of complex structural landscapes, the presented approach offers a general, low-dimensional set of differentiable variables which has the potential to be used for exploration and enhanced sampling purposes.

cond-mat.mtrl-sci