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Emiliano Zamponi

Publications and source records attributed to Emiliano Zamponi.

2 recordsLinked to original sources

Universal dynamics of mitochondrial networks: a finite-size scaling analysis

A growing body of evidence suggests that the structure of mitochondrial networks is poised near criticality, an intermediate regime lying in between order and disorder. Such description fits well with the idea that biological systems, in general, may benefit from the long-range correlations and large flexibility conferred by a critical regime. Despite the attractiveness of this proposal, a clear understanding of the possible scenarios leading these networks to criticality is still lacking. In this work, we compared the behavior of mitochondrial networks emerging from a dimensionless agent-based (AB) model and a spatially explicit (SE) model, in which nodes are embedded on a 2D lattice. In both scenarios, we described the position of the control parameter at which mitochondrial networks exhibit a dynamical phase transition as well as the size-dependency of several network features. Furthermore, we showed that the mitochondrial networks from mouse embryonic fibroblasts presented similar topologies to the ones generated using the AB model, while their universal behavior is better described by a SE model. Using finite-size scaling analysis conducted on models and empirical data we defined the universality classes they belong and provided the theoretical boundaries for the mechanisms governing mitochondrial network formation. Our findings predict the full repertoire of dynamical behavior expected for real mitochondrial networks under physiological and pathological conditions.

physics.bio-ph

Mitochondrial network complexity emerges from fission/fusion dynamics

Mitochondrial networks exhibit a variety of complex behaviors, including coordinated cell-wide oscillations of energy states as well as a phase transition (depolarization) in response to oxidative stress. Since functional and structural properties are often interwinded, here we characterize the structure of mitochondrial networks in mouse embryonic fibroblasts using network tools and percolation theory. Subsequently we perturbed the system either by promoting the fusion of mitochondrial segments or by inducing mitochondrial fission. Quantitative analysis of mitochondrial clusters revealed that the structural parameters of healthy mitochondria lay in between the extremes of highly fragmented and completely fusioned networks. We confirmed our results by contrasting our emprirical findings with the predictions of a recently described computational model of mitochondrial network emergence based on fission-fusion kinetics. Altogether these results not only offer an objective methodology to parametrize the complexity of this organelle but add weight to the idea that mitochondrial networks behave as critical systems and undergo structural phase transitions.

physics.bio-ph