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Erik Rodner

Publications and source records attributed to Erik Rodner.

At least 19 recordsLinked to original sources

RamanBench: A Large-Scale Benchmark for Machine Learning on Raman Spectroscopy

Machine Learning (ML) has transformed many scientific fields, yet key applications still lack standardized benchmarks. Raman spectroscopy, a widely used technique for non-invasive molecular analysis, is one such field where progress is limited by fragmented datasets, inconsistent evaluation, and models that fail to capture the structure of spectral data. We introduce RamanBench, the first large-scale, fully reproducible benchmark for ML on Raman spectroscopy, consisting of streamlined data access, evaluation protocols and code, as well as a live leaderboard. It unifies 74 datasets (including 16 first released with this benchmark) across four domains, comprising 325,668 spectra and spanning classification and regression tasks under diverse experimental conditions. We benchmark 28 models under a standardized protocol, including classical methods (e.g., PLS), Raman-specific (e.g., RamanNet), Tabular Foundation Model (TFM) (e.g., TabPFN), and time-series approaches (e.g., ROCKET). TFM consistently outperform domain-specific and gradient boosting baselines, while time-series models remain competitive. However, no method generalizes across datasets, revealing a fundamental gap. Therefore, we invite the community to contribute new approaches to our living benchmark, with the potential to accelerate advances in critical applications such as medical diagnostics, biological research, and materials science.

cs.LG

ConceptTracer: Interactive Analysis of Concept Saliency and Selectivity in Neural Representations

Neural networks deliver impressive predictive performance across a variety of tasks, but they are often opaque in their decision-making processes. Despite a growing interest in mechanistic interpretability, tools for systematically exploring the representations learned by neural networks in general, and tabular foundation models in particular, remain limited. In this work, we introduce ConceptTracer, an interactive application for analyzing neural representations through the lens of human-interpretable concepts. ConceptTracer integrates two information-theoretic measures that quantify concept saliency and selectivity, enabling researchers and practitioners to identify neurons that respond strongly to individual concepts. We demonstrate the utility of ConceptTracer on representations learned by TabPFN and show that our approach facilitates the discovery of interpretable neurons. Together, these capabilities provide a practical framework for investigating how neural networks like TabPFN encode concept-level information. ConceptTracer is available at https://github.com/ml-lab-htw/concept-tracer.

cs.LG

Embedding World Knowledge into Tabular Models: Towards Best Practices for Embedding Pipeline Design

Embeddings are a powerful way to enrich data-driven machine learning models with the world knowledge of large language models (LLMs). Yet, there is limited evidence on how to design effective LLM-based embedding pipelines for tabular prediction. In this work, we systematically benchmark 256 pipeline configurations, covering 8 preprocessing strategies, 16 embedding models, and 2 downstream models. Our results show that it strongly depends on the specific pipeline design whether incorporating the prior knowledge of LLMs improves the predictive performance. In general, concatenating embeddings tends to outperform replacing the original columns with embeddings. Larger embedding models tend to yield better results, while public leaderboard rankings and model popularity are poor performance indicators. Finally, gradient boosting decision trees tend to be strong downstream models. Our findings provide researchers and practitioners with guidance for building more effective embedding pipelines for tabular prediction tasks.

cs.LG

LLMStructBench: Benchmarking Large Language Model Structured Data Extraction

We present LLMStructBench, a novel benchmark for evaluating Large Language Models (LLMs) on extracting structured data and generating valid JavaScript Object Notation (JSON) outputs from natural-language text. Our open dataset comprises diverse, manually verified parsing scenarios of varying complexity and enables systematic testing across 22 models and five prompting strategies. We further introduce complementary performance metrics that capture both token-level accuracy and document-level validity, facilitating rigorous comparison of model, size, and prompting effects on parsing reliability. In particular, we show that choosing the right prompting strategy is more important than standard attributes such as model size. This especially ensures structural validity for smaller or less reliable models but increase the number of semantic errors. Our benchmark suite is an step towards future research in the area of LLM applied to parsing or Extract, Transform and Load (ETL) applications.

cs.CL

In Search of Grandmother Cells: Tracing Interpretable Neurons in Tabular Representations

Foundation models are powerful yet often opaque in their decision-making. A topic of continued interest in both neuroscience and artificial intelligence is whether some neurons behave like grandmother cells, i.e., neurons that are inherently interpretable because they exclusively respond to single concepts. In this work, we propose two information-theoretic measures that quantify the neuronal saliency and selectivity for single concepts. We apply these metrics to the representations of TabPFN, a tabular foundation model, and perform a simple search across neuron-concept pairs to find the most salient and selective pair. Our analysis provides the first evidence that some neurons in such models show moderate, statistically significant saliency and selectivity for high-level concepts. These findings suggest that interpretable neurons can emerge naturally and that they can, in some cases, be identified without resorting to more complex interpretability techniques.

cs.LG

Is Visual in-Context Learning for Compositional Medical Tasks within Reach?

In this paper, we explore the potential of visual in-context learning to enable a single model to handle multiple tasks and adapt to new tasks during test time without re-training. Unlike previous approaches, our focus is on training in-context learners to adapt to sequences of tasks, rather than individual tasks. Our goal is to solve complex tasks that involve multiple intermediate steps using a single model, allowing users to define entire vision pipelines flexibly at test time. To achieve this, we first examine the properties and limitations of visual in-context learning architectures, with a particular focus on the role of codebooks. We then introduce a novel method for training in-context learners using a synthetic compositional task generation engine. This engine bootstraps task sequences from arbitrary segmentation datasets, enabling the training of visual in-context learners for compositional tasks. Additionally, we investigate different masking-based training objectives to gather insights into how to train models better for solving complex, compositional tasks. Our exploration not only provides important insights especially for multi-modal medical task sequences but also highlights challenges that need to be addressed.

cs.CV

On the Domain Robustness of Contrastive Vision-Language Models

In real-world vision-language applications, practitioners increasingly rely on large, pretrained foundation models rather than custom-built solutions, despite limited transparency regarding their training data and processes. While these models achieve impressive performance on general benchmarks, their effectiveness can decline notably under specialized domain shifts, such as unique imaging conditions or environmental variations. In this work, we introduce Deepbench, a framework designed to assess domain-specific robustness of vision-language models (VLMs). Deepbench leverages a large language model (LLM) to generate realistic, context-aware image corruptions tailored to specific deployment domains without requiring labeled data. We evaluate a range of contrastive vision-language architectures and architectural variants across six real-world domains and observe substantial variability in robustness, highlighting the need for targeted, domain-aware evaluation. Deepbench is released as open-source software to support further research into domain-aware robustness assessment.

cs.CV

SCAM: A Real-World Typographic Robustness Evaluation for Multimodal Foundation Models

Typographic attacks exploit the interplay between text and visual content in multimodal foundation models, causing misclassifications when misleading text is embedded within images. Existing datasets are limited in size and diversity, making it difficult to study such vulnerabilities. In this paper, we introduce SCAM, the largest and most diverse dataset of real-world typographic attack images to date, containing 1162 images across hundreds of object categories and attack words. Through extensive benchmarking of Vision-Language Models on SCAM, we demonstrate that typographic attacks significantly degrade performance, and identify that training data and model architecture influence the susceptibility to these attacks. Our findings indicate that typographic attacks remain effective against state-of-the-art Large Vision-Language Models, especially those employing vision encoders inherently vulnerable to such attacks. However, employing larger Large Language Model backbones reduces this vulnerability while simultaneously enhancing typographic understanding. Additionally, we demonstrate that synthetic attacks closely resemble real-world (handwritten) attacks, validating their use in research. Our work provides a comprehensive resource and empirical insights to facilitate future research toward robust and trustworthy multimodal AI systems. Finally, we publicly release the datasets introduced in this paper, along with the code for evaluations under www.bliss.berlin/research/scam.

cs.CV

Robust Weight Imprinting: Insights from Neural Collapse and Proxy-Based Aggregation

The capacity of foundation models allows for their application to new, unseen tasks. The adaptation to such tasks is called transfer learning. An efficient transfer learning method that circumvents parameter optimization is imprinting. The conceptual differences between studies on imprinting form the basis of our systematic investigation. In this work, we propose the general \texttt{IMPRINT} framework, identifying three main components: generation, normalization, and aggregation. Through the lens of this framework, we conduct an in-depth analysis and a comparison of the existing methods. Our findings reveal the benefits of representing novel data with multiple proxies in the generation step and show the importance of proper normalization. Beyond an extensive analytical grounding, our framework enables us to propose a novel variant of imprinting which outperforms previous work on transfer learning tasks by 4\%. This variant determines proxies through clustering motivated by the neural collapse phenomenon -- a connection that we draw for the first time. We publicly release our code at https://github.com/DATEXIS/IMPRINT.

cs.LG

Feedback-driven object detection and iterative model improvement

Automated object detection has become increasingly valuable across diverse applications, yet efficient, high-quality annotation remains a persistent challenge. In this paper, we present the development and evaluation of a platform designed to interactively improve object detection models. The platform allows uploading and annotating images as well as fine-tuning object detection models. Users can then manually review and refine annotations, further creating improved snapshots that are used for automatic object detection on subsequent image uploads - a process we refer to as semi-automatic annotation resulting in a significant gain in annotation efficiency. Whereas iterative refinement of model results to speed up annotation has become common practice, we are the first to quantitatively evaluate its benefits with respect to time, effort, and interaction savings. Our experimental results show clear evidence for a significant time reduction of up to 53% for semi-automatic compared to manual annotation. Importantly, these efficiency gains did not compromise annotation quality, while matching or occasionally even exceeding the accuracy of manual annotations. These findings demonstrate the potential of our lightweight annotation platform for creating high-quality object detection datasets and provide best practices to guide future development of annotation platforms. The platform is open-source, with the frontend and backend repositories available on GitHub. To support the understanding of our labeling process, we have created an explanatory video demonstrating the methodology using microscopy images of E. coli bacteria as an example.

cs.CV

"Oh LLM, I'm Asking Thee, Please Give Me a Decision Tree": Zero-Shot Decision Tree Induction and Embedding with Large Language Models

Large language models (LLMs) provide powerful means to leverage prior knowledge for predictive modeling when data is limited. In this work, we demonstrate how LLMs can use their compressed world knowledge to generate intrinsically interpretable machine learning models, i.e., decision trees, without any training data. We find that these zero-shot decision trees can even surpass data-driven trees on some small-sized tabular datasets and that embeddings derived from these trees perform better than data-driven tree-based embeddings on average. Our decision tree induction and embedding approaches can therefore serve as new knowledge-driven baselines for data-driven machine learning methods in the low-data regime. Furthermore, they offer ways to harness the rich world knowledge within LLMs for tabular machine learning tasks. Our code and results are available at https://github.com/ml-lab-htw/llm-trees.

cs.AI

PMLBmini: A Tabular Classification Benchmark Suite for Data-Scarce Applications

In practice, we are often faced with small-sized tabular data. However, current tabular benchmarks are not geared towards data-scarce applications, making it very difficult to derive meaningful conclusions from empirical comparisons. We introduce PMLBmini, a tabular benchmark suite of 44 binary classification datasets with sample sizes $\leq$ 500. We use our suite to thoroughly evaluate current automated machine learning (AutoML) frameworks, off-the-shelf tabular deep neural networks, as well as classical linear models in the low-data regime. Our analysis reveals that state-of-the-art AutoML and deep learning approaches often fail to appreciably outperform even a simple logistic regression baseline, but we also identify scenarios where AutoML and deep learning methods are indeed reasonable to apply. Our benchmark suite, available on https://github.com/RicardoKnauer/TabMini , allows researchers and practitioners to analyze their own methods and challenge their data efficiency.

cs.LG

Squeezing Lemons with Hammers: An Evaluation of AutoML and Tabular Deep Learning for Data-Scarce Classification Applications

Many industry verticals are confronted with small-sized tabular data. In this low-data regime, it is currently unclear whether the best performance can be expected from simple baselines, or more complex machine learning approaches that leverage meta-learning and ensembling. On 44 tabular classification datasets with sample sizes $\leq$ 500, we find that L2-regularized logistic regression performs similar to state-of-the-art automated machine learning (AutoML) frameworks (AutoPrognosis, AutoGluon) and off-the-shelf deep neural networks (TabPFN, HyperFast) on the majority of the benchmark datasets. We therefore recommend to consider logistic regression as the first choice for data-scarce applications with tabular data and provide practitioners with best practices for further method selection.

cs.LG

Cost-Sensitive Best Subset Selection for Logistic Regression: A Mixed-Integer Conic Optimization Perspective

A key challenge in machine learning is to design interpretable models that can reduce their inputs to the best subset for making transparent predictions, especially in the clinical domain. In this work, we propose a certifiably optimal feature selection procedure for logistic regression from a mixed-integer conic optimization perspective that can take an auxiliary cost to obtain features into account. Based on an extensive review of the literature, we carefully create a synthetic dataset generator for clinical prognostic model research. This allows us to systematically evaluate different heuristic and optimal cardinality- and budget-constrained feature selection procedures. The analysis shows key limitations of the methods for the low-data regime and when confronted with label noise. Our paper not only provides empirical recommendations for suitable methods and dataset designs, but also paves the way for future research in the area of meta-learning.

cs.AI

CAD Models to Real-World Images: A Practical Approach to Unsupervised Domain Adaptation in Industrial Object Classification

In this paper, we systematically analyze unsupervised domain adaptation pipelines for object classification in a challenging industrial setting. In contrast to standard natural object benchmarks existing in the field, our results highlight the most important design choices when only category-labeled CAD models are available but classification needs to be done with real-world images. Our domain adaptation pipeline achieves SoTA performance on the VisDA benchmark, but more importantly, drastically improves recognition performance on our new open industrial dataset comprised of 102 mechanical parts. We conclude with a set of guidelines that are relevant for practitioners needing to apply state-of-the-art unsupervised domain adaptation in practice. Our code is available at https://github.com/dritter-bht/synthnet-transfer-learning.

cs.CV

Evaluating Zero-cost Active Learning for Object Detection

Object detection requires substantial labeling effort for learning robust models. Active learning can reduce this effort by intelligently selecting relevant examples to be annotated. However, selecting these examples properly without introducing a sampling bias with a negative impact on the generalization performance is not straightforward and most active learning techniques can not hold their promises on real-world benchmarks. In our evaluation paper, we focus on active learning techniques without a computational overhead besides inference, something we refer to as zero-cost active learning. In particular, we show that a key ingredient is not only the score on a bounding box level but also the technique used for aggregating the scores for ranking images. We outline our experimental setup and also discuss practical considerations when using active learning for object detection.

cs.LG

Every Annotation Counts: Multi-label Deep Supervision for Medical Image Segmentation

Pixel-wise segmentation is one of the most data and annotation hungry tasks in our field. Providing representative and accurate annotations is often mission-critical especially for challenging medical applications. In this paper, we propose a semi-weakly supervised segmentation algorithm to overcome this barrier. Our approach is based on a new formulation of deep supervision and student-teacher model and allows for easy integration of different supervision signals. In contrast to previous work, we show that care has to be taken how deep supervision is integrated in lower layers and we present multi-label deep supervision as the most important secret ingredient for success. With our novel training regime for segmentation that flexibly makes use of images that are either fully labeled, marked with bounding boxes, just global labels, or not at all, we are able to cut the requirement for expensive labels by 94.22% - narrowing the gap to the best fully supervised baseline to only 5% mean IoU. Our approach is validated by extensive experiments on retinal fluid segmentation and we provide an in-depth analysis of the anticipated effect each annotation type can have in boosting segmentation performance.

cs.CV

Detecting Regions of Maximal Divergence for Spatio-Temporal Anomaly Detection

Automatic detection of anomalies in space- and time-varying measurements is an important tool in several fields, e.g., fraud detection, climate analysis, or healthcare monitoring. We present an algorithm for detecting anomalous regions in multivariate spatio-temporal time-series, which allows for spotting the interesting parts in large amounts of data, including video and text data. In opposition to existing techniques for detecting isolated anomalous data points, we propose the "Maximally Divergent Intervals" (MDI) framework for unsupervised detection of coherent spatial regions and time intervals characterized by a high Kullback-Leibler divergence compared with all other data given. In this regard, we define an unbiased Kullback-Leibler divergence that allows for ranking regions of different size and show how to enable the algorithm to run on large-scale data sets in reasonable time using an interval proposal technique. Experiments on both synthetic and real data from various domains, such as climate analysis, video surveillance, and text forensics, demonstrate that our method is widely applicable and a valuable tool for finding interesting events in different types of data.

stat.ML