arXiv subjects

Eung-Joo Lee

Publications and source records attributed to Eung-Joo Lee.

8 recordsLinked to original sources

arXiv2026

AI for Mycetoma Diagnosis in Histopathological Images: The MICCAI 2024 Challenge

Mycetoma is a neglected tropical disease caused by fungi or bacteria leading to severe tissue damage and disabilities. It affects poor and rural communities and presents medical challenges and socioeconomic burdens on patients and healthcare systems in endemic regions worldwide. Mycetoma diagnosis is a major challenge in mycetoma management, particularly in low-resource settings where expert pathologists are limited. To address this challenge, this paper presents an overview of the Mycetoma MicroImage: Detect and Classify Challenge (mAIcetoma) which was organized to advance mycetoma diagnosis through AI solutions. mAIcetoma focused on developing automated models for segmenting mycetoma grains and classifying mycetoma types from histopathological images. The challenge attracted the attention of several teams worldwide to participate and five finalist teams fulfilled the challenge objectives. The teams proposed various deep learning architectures for the ultimate goal of this challenge. Mycetoma database (MyData) was provided to participants as a standardized dataset to run the proposed models. Those models were evaluated using evaluation metrics. Results showed that all the models achieved high segmentation accuracy, emphasizing the necessitate of grain detection as a critical step in mycetoma diagnosis. In addition, the top-performing models show a significant performance in classifying mycetoma types.

cs.CV↗

arXiv2026

SegSTRONG-C: Segmenting Surgical Tools Robustly On Non-adversarial Generated Corruptions -- An EndoVis'24 Challenge

Surgical data science has seen rapid advancement with the excellent performance of end-to-end deep neural networks (DNNs). Despite their successes, DNNs have been proven susceptible to minor "corruptions," introducing a major concern for the translation of cutting-edge technology, especially in high-stakes scenarios. We introduce the SegSTRONG-C challenge dedicated to better understanding model deterioration under unforeseen but plausible non-adversarial "corruption" and the capabilities of contemporary methods that seek to improve it. Built on a dataset generated through counterfactual robotic replay, SegSTRONG-C provides paired clean and "corrupted" samples, enabling reproducible evaluation of model robustness. Participants are challenged to train tool segmentation algorithms on "uncorrupted" data and evaluate them on "corrupted" test domains for the binary robot tool segmentation task. Through comprehensive baseline experiments and participating submissions from widespread community engagement, SegSTRONG-C reveals key themes for model failure and identifies promising directions for improving robustness. The performance of challenge winners, achieving an average 0.9394 DSC and 0.9301 NSD across the unreleased test sets with "corruption" types: bleeding, smoke, and low brightness. This highlights how prior knowledge, customized training strategies, and architectural choice can be leveraged to improve robustness. In conclusion, the SegSTRONG-C challenge has identified practical approaches for enhancing model robustness. However, most approaches rely on conventional techniques that have known limitations. Looking ahead, we advocate for expanding intellectual diversity and creativity in non-adversarial robustness beyond data augmentation, calling for new paradigms that enhance universal robustness to unforeseen "corruptions" to facilitate richer applications in surgical data science.

cs.CV↗

arXiv2025

Using Cross-Domain Detection Loss to Infer Multi-Scale Information for Improved Tiny Head Tracking

Head detection and tracking are essential for downstream tasks, but current methods often require large computational budgets, which increase latencies and ties up resources (e.g., processors, memory, and bandwidth). To address this, we propose a framework to enhance tiny head detection and tracking by optimizing the balance between performance and efficiency. Our framework integrates (1) a cross-domain detection loss, (2) a multi-scale module, and (3) a small receptive field detection mechanism. These innovations enhance detection by bridging the gap between large and small detectors, capturing high-frequency details at multiple scales during training, and using filters with small receptive fields to detect tiny heads. Evaluations on the CroHD and CrowdHuman datasets show improved Multiple Object Tracking Accuracy (MOTA) and mean Average Precision (mAP), demonstrating the effectiveness of our approach in crowded scenes.

cs.CV↗

arXiv2025

ViT-2SPN: Vision Transformer-based Dual-Stream Self-Supervised Pretraining Networks for Retinal OCT Classification

Optical Coherence Tomography (OCT) is a non-invasive imaging modality essential for diagnosing various eye diseases. Despite its clinical significance, developing OCT-based diagnostic tools faces challenges, such as limited public datasets, sparse annotations, and privacy concerns. Although deep learning has made progress in automating OCT analysis, these challenges remain unresolved. To address these limitations, we introduce the Vision Transformer-based Dual-Stream Self-Supervised Pretraining Network (ViT-2SPN), a novel framework designed to enhance feature extraction and improve diagnostic accuracy. ViT-2SPN employs a three-stage workflow: Supervised Pretraining, Self-Supervised Pretraining (SSP), and Supervised Fine-Tuning. The pretraining phase leverages the OCTMNIST dataset (97,477 unlabeled images across four disease classes) with data augmentation to create dual-augmented views. A Vision Transformer (ViT-Base) backbone extracts features, while a negative cosine similarity loss aligns feature representations. Pretraining is conducted over 50 epochs with a learning rate of 0.0001 and momentum of 0.999. Fine-tuning is performed on a stratified 5.129% subset of OCTMNIST using 10-fold cross-validation. ViT-2SPN achieves a mean AUC of 0.93, accuracy of 0.77, precision of 0.81, recall of 0.75, and an F1 score of 0.76, outperforming existing SSP-based methods.

cs.CV↗

arXiv2025

Self-supervised Graph Transformer with Contrastive Learning for Brain Connectivity Analysis towards Improving Autism Detection

Functional Magnetic Resonance Imaging (fMRI) provides useful insights into the brain function both during task or rest. Representing fMRI data using correlation matrices is found to be a reliable method of analyzing the inherent connectivity of the brain in the resting and active states. Graph Neural Networks (GNNs) have been widely used for brain network analysis due to their inherent explainability capability. In this work, we introduce a novel framework using contrastive self-supervised learning graph transformers, incorporating a brain network transformer encoder with random graph alterations. The proposed network leverages both contrastive learning and graph alterations to effectively train the graph transformer for autism detection. Our approach, tested on Autism Brain Imaging Data Exchange (ABIDE) data, demonstrates superior autism detection, achieving an AUROC of 82.6 and an accuracy of 74%, surpassing current state-of-the-art methods.

cs.LG↗

arXiv2023

A Literature Review on the Smart Wheelchair Systems

This study offers an in-depth analysis of smart wheelchair (SW) systems, charting their progression from early developments to future innovations. It delves into various Brain-Computer Interface (BCI) systems, including mu rhythm, event-related potential, and steady-state visual evoked potential. The paper addresses challenges in signal categorization, proposing the sparse Bayesian extreme learning machine as an innovative solution. Additionally, it explores the integration of emotional states in BCI systems, the application of alternative control methods such as EMG-based systems, and the deployment of intelligent adaptive interfaces utilizing recurrent quantum neural networks. The study also covers advancements in autonomous navigation, assistance, and mapping, emphasizing their importance in SW systems. The human aspect of SW interaction receives considerable attention, specifically in terms of privacy, physiological factors, and the refinement of control mechanisms. The paper acknowledges the commercial challenges faced, like the limitations of indoor usage and the necessity for user training. For future applications, the research explores the potential of autonomous systems adept at adapting to changing environments and user needs. This exploration includes reinforcement learning and various control methods, such as eye and voice control, to improve adaptability and interaction. The potential integration with smart home technologies, including advanced features such as robotic arms, is also considered, aiming to further enhance user accessibility and independence. Ultimately, this study seeks to provide a thorough overview of SW systems, presenting extensive research to detail their historical evolution, current state, and future prospects.

eess.SY↗

arXiv2022

Validation of object detection in UAV-based images using synthetic data

Object detection is increasingly used onboard Unmanned Aerial Vehicles (UAV) for various applications; however, the machine learning (ML) models for UAV-based detection are often validated using data curated for tasks unrelated to the UAV application. This is a concern because training neural networks on large-scale benchmarks have shown excellent capability in generic object detection tasks, yet conventional training approaches can lead to large inference errors for UAV-based images. Such errors arise due to differences in imaging conditions between images from UAVs and images in training. To overcome this problem, we characterize boundary conditions of ML models, beyond which the models exhibit rapid degradation in detection accuracy. Our work is focused on understanding the impact of different UAV-based imaging conditions on detection performance by using synthetic data generated using a game engine. Properties of the game engine are exploited to populate the synthetic datasets with realistic and annotated images. Specifically, it enables the fine control of various parameters, such as camera position, view angle, illumination conditions, and object pose. Using the synthetic datasets, we analyze detection accuracy in different imaging conditions as a function of the above parameters. We use three well-known neural network models with different model complexity in our work. In our experiment, we observe and quantify the following: 1) how detection accuracy drops as the camera moves toward the nadir-view region; 2) how detection accuracy varies depending on different object poses, and 3) the degree to which the robustness of the models changes as illumination conditions vary.

cs.CV↗

arXiv2021

Comparative Validation of Machine Learning Algorithms for Surgical Workflow and Skill Analysis with the HeiChole Benchmark

PURPOSE: Surgical workflow and skill analysis are key technologies for the next generation of cognitive surgical assistance systems. These systems could increase the safety of the operation through context-sensitive warnings and semi-autonomous robotic assistance or improve training of surgeons via data-driven feedback. In surgical workflow analysis up to 91% average precision has been reported for phase recognition on an open data single-center dataset. In this work we investigated the generalizability of phase recognition algorithms in a multi-center setting including more difficult recognition tasks such as surgical action and surgical skill. METHODS: To achieve this goal, a dataset with 33 laparoscopic cholecystectomy videos from three surgical centers with a total operation time of 22 hours was created. Labels included annotation of seven surgical phases with 250 phase transitions, 5514 occurences of four surgical actions, 6980 occurences of 21 surgical instruments from seven instrument categories and 495 skill classifications in five skill dimensions. The dataset was used in the 2019 Endoscopic Vision challenge, sub-challenge for surgical workflow and skill analysis. Here, 12 teams submitted their machine learning algorithms for recognition of phase, action, instrument and/or skill assessment. RESULTS: F1-scores were achieved for phase recognition between 23.9% and 67.7% (n=9 teams), for instrument presence detection between 38.5% and 63.8% (n=8 teams), but for action recognition only between 21.8% and 23.3% (n=5 teams). The average absolute error for skill assessment was 0.78 (n=1 team). CONCLUSION: Surgical workflow and skill analysis are promising technologies to support the surgical team, but are not solved yet, as shown by our comparison of algorithms. This novel benchmark can be used for comparable evaluation and validation of future work.

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