arXiv subjects

Fahad Panolan

Publications and source records attributed to Fahad Panolan.

At least 37 records · Page 2Linked to original sources

arXiv2022

Boolean and $\mathbb{F}_p$-Matrix Factorization: From Theory to Practice

Boolean Matrix Factorization (BMF) aims to find an approximation of a given binary matrix as the Boolean product of two low-rank binary matrices. Binary data is ubiquitous in many fields, and representing data by binary matrices is common in medicine, natural language processing, bioinformatics, computer graphics, among many others. Unfortunately, BMF is computationally hard and heuristic algorithms are used to compute Boolean factorizations. Very recently, the theoretical breakthrough was obtained independently by two research groups. Ban et al. (SODA 2019) and Fomin et al. (Trans. Algorithms 2020) show that BMF admits an efficient polynomial-time approximation scheme (EPTAS). However, despite the theoretical importance, the high double-exponential dependence of the running times from the rank makes these algorithms unimplementable in practice. The primary research question motivating our work is whether the theoretical advances on BMF could lead to practical algorithms. The main conceptional contribution of our work is the following. While EPTAS for BMF is a purely theoretical advance, the general approach behind these algorithms could serve as the basis in designing better heuristics. We also use this strategy to develop new algorithms for related $\mathbb{F}_p$-Matrix Factorization. Here, given a matrix $A$ over a finite field GF($p$) where $p$ is a prime, and an integer $r$, our objective is to find a matrix $B$ over the same field with GF($p$)-rank at most $r$ minimizing some norm of $A-B$. Our empirical research on synthetic and real-world data demonstrates the advantage of the new algorithms over previous works on BMF and $\mathbb{F}_p$-Matrix Factorization.

cs.LG↗

arXiv2022

Partial Vertex Cover on Graphs of Bounded Degeneracy

In the Partial Vertex Cover (PVC) problem, we are given an $n$-vertex graph $G$ and a positive integer $k$, and the objective is to find a vertex subset $S$ of size $k$ maximizing the number of edges with at least one end-point in $S$. This problem is W[1]-hard on general graphs, but admits a parameterized subexponential time algorithm with running time $2^{O(\sqrt{k})}n^{O(1)}$ on planar and apex-minor free graphs [Fomin et al. (FSTTCS 2009, IPL 2011)], and a $k^{O(k)}n^{O(1)}$ time algorithm on bounded degeneracy graphs [Amini et al. (FSTTCS 2009, JCSS 2011)]. Graphs of bounded degeneracy contain many sparse graph classes like planar graphs, $H$-minor free graphs, and bounded tree-width graphs. In this work, we prove the following results: 1) There is an algorithm for PVC with running time $2^{O(k)}n^{O(1)}$ on graphs of bounded degeneracy which is an improvement on the previous $k^{O(k)}n^{O(1)}$ time algorithm by Amini et al. 2) PVC admits a polynomial compression on graphs of bounded degeneracy, resolving an open problem posed by Amini et al.

cs.DS↗

arXiv2022

Deleting, Eliminating and Decomposing to Hereditary Classes Are All FPT-Equivalent

For a graph class ${\cal H}$, the graph parameters elimination distance to ${\cal H}$ (denoted by ${\bf ed}_{\cal H}$) [Bulian and Dawar, Algorithmica, 2016], and ${\cal H}$-treewidth (denoted by ${\bf tw}_{\cal H}$) [Eiben et al. JCSS, 2021] aim to minimize the treedepth and treewidth, respectively, of the "torso" of the graph induced on a modulator to the graph class ${\cal H}$. Here, the torso of a vertex set $S$ in a graph $G$ is the graph with vertex set $S$ and an edge between two vertices $u, v \in S$ if there is a path between $u$ and $v$ in $G$ whose internal vertices all lie outside $S$. In this paper, we show that from the perspective of (non-uniform) fixed-parameter tractability (FPT), the three parameters described above give equally powerful parameterizations for every hereditary graph class ${\cal H}$ that satisfies mild additional conditions. In fact, we show that for every hereditary graph class ${\cal H}$ satisfying mild additional conditions, with the exception of ${\bf tw}_{\cal H}$ parameterized by ${\bf ed}_{\cal H}$, for every pair of these parameters, computing one parameterized by itself or any of the others is FPT-equivalent to the standard vertex-deletion (to ${\cal H}$) problem. As an example, we prove that an FPT algorithm for the vertex-deletion problem implies a non-uniform FPT algorithm for computing ${\bf ed}_{\cal H}$ and ${\bf tw}_{\cal H}$. The conclusions of non-uniform FPT algorithms being somewhat unsatisfactory, we essentially prove that if ${\cal H}$ is hereditary, union-closed, CMSO-definable, and (a) the canonical equivalence relation (or any refinement thereof) for membership in the class can be efficiently computed, or (b) the class admits a "strong irrelevant vertex rule", then there exists a uniform FPT algorithm for ${\bf ed}_{\cal H}$.

cs.DS↗

arXiv2021

Gerrymandering on graphs: Computational complexity and parameterized algorithms

Partitioning a region into districts to favor a particular candidate or a party is commonly known as gerrymandering. In this paper, we investigate the gerrymandering problem in graph theoretic setting as proposed by Cohen-Zemach et al. [AAMAS 2018]. Our contributions in this article are two-fold, conceptual and computational. We first resolve the open question posed by Ito et al. [AAMAS 2019] about the computational complexity of the problem when the input graph is a path. Next, we propose a generalization of their model, where the input consists of a graph on $n$ vertices representing the set of voters, a set of $m$ candidates $\mathcal{C}$, a weight function $w_v: \mathcal{C}\rightarrow {\mathbb Z}^+$ for each voter $v\in V(G)$ representing the preference of the voter over the candidates, a distinguished candidate $p\in \mathcal{C}$, and a positive integer $k$. The objective is to decide if one can partition the vertex set into $k$ pairwise disjoint connected sets (districts) s.t $p$ wins more districts than any other candidate. The problem is known to be NPC even if $k=2$, $m=2$, and $G$ is either a complete bipartite graph (in fact $K_{2,n}$) or a complete graph. This means that in search for FPT algorithms we need to either focus on the parameter $n$, or subclasses of forest. Circumventing these intractable results, we give a deterministic and a randomized algorithms for the problem on paths running in times $2.619^{k}(n+m)^{O(1)}$ and $2^{k}(n+m)^{O(1)}$, respectively. Additionally, we prove that the problem on general graphs is solvable in time $2^n (n+m)^{O(1)}$. Our algorithmic results use sophisticated technical tools such as representative set family and Fast Fourier transform based polynomial multiplication, and their (possibly first) application to problems arising in social choice theory and/or game theory may be of independent interest to the community.

cs.DS↗

arXiv2021

Target Set Selection parameterized by vertex cover and more

Given a simple, undirected graph $G$ with a threshold function $τ:V(G) \rightarrow \mathbb{N}$, the \textsc{Target Set Selection} (TSS) problem is about choosing a minimum cardinality set, say $S \subseteq V(G)$, such that starting a diffusion process with $S$ as its seed set will eventually result in activating all the nodes in $G$. For any non-negative integer $i$, we say a set $T\subseteq V(G)$ is a "degree-$i$ modulator" of $G$ if the degree of any vertex in the graph $G-T$ is at most $i$. Degree-$0$ modulators of a graph are precisely its vertex covers. Consider a graph $G$ on $n$ vertices and $m$ edges. We have the following results on the TSS problem: -> It was shown by Nichterlein et al. [Social Network Analysis and Mining, 2013] that it is possible to compute an optimal-sized target set in $O(2^{(2^{t}+1)t}\cdot m)$ time, where $t$ denotes the cardinality of a minimum degree-$0$ modulator of $G$. We improve this result by designing an algorithm running in time $2^{O(t\log t)}n^{O(1)}$. -> We design a $2^{2^{O(t)}}n^{O(1)}$ time algorithm to compute an optimal target set for $G$, where $t$ is the size of a minimum degree-$1$ modulator of $G$.

cs.CC↗

arXiv2021

Diverse Collections in Matroids and Graphs

We investigate the parameterized complexity of finding diverse sets of solutions to three fundamental combinatorial problems, two from the theory of matroids and the third from graph theory. The input to the Weighted Diverse Bases problem consists of a matroid $M$, a weight function $ω:E(M)\to\mathbb{N}$, and integers $k\geq 1, d\geq 0$. The task is to decide if there is a collection of $k$ bases $B_{1}, \dotsc, B_{k}$ of $M$ such that the weight of the symmetric difference of any pair of these bases is at least $d$. This is a diverse variant of the classical matroid base packing problem. The input to the Weighted Diverse Common Independent Sets problem consists of two matroids $M_{1},M_{2}$ defined on the same ground set $E$, a weight function $ω:E\to\mathbb{N}$, and integers $k\geq 1, d\geq 0$. The task is to decide if there is a collection of $k$ common independent sets $I_{1}, \dotsc, I_{k}$ of $M_{1}$ and $M_{2}$ such that the weight of the symmetric difference of any pair of these sets is at least $d$. This is motivated by the classical weighted matroid intersection problem. The input to the Diverse Perfect Matchings problem consists of a graph $G$ and integers $k\geq 1, d\geq 0$. The task is to decide if $G$ contains $k$ perfect matchings $M_{1},\dotsc,M_{k}$ such that the symmetric difference of any two of these matchings is at least $d$. We show that Weighted Diverse Bases and Weighted Diverse Common Independent Sets are both NP-hard, and derive fixed-parameter tractable (FPT) algorithms for all three problems with $(k,d)$ as the parameter.

cs.DS↗

arXiv2020

EPTAS for $k$-means Clustering of Affine Subspaces

We consider a generalization of the fundamental $k$-means clustering for data with incomplete or corrupted entries. When data objects are represented by points in $\mathbb{R}^d$, a data point is said to be incomplete when some of its entries are missing or unspecified. An incomplete data point with at most $Δ$ unspecified entries corresponds to an axis-parallel affine subspace of dimension at most $Δ$, called a $Δ$-point. Thus we seek a partition of $n$ input $Δ$-points into $k$ clusters minimizing the $k$-means objective. For $Δ=0$, when all coordinates of each point are specified, this is the usual $k$-means clustering. We give an algorithm that finds an $(1+ ε)$-approximate solution in time $f(k,ε, Δ) \cdot n^2 \cdot d$ for some function $f$ of $k,ε$, and $Δ$ only.

cs.DS↗

arXiv2020

Improved FPT Algorithms for Deletion to Forest-like Structures

The Feedback Vertex Set problem is undoubtedly one of the most well-studied problems in Parameterized Complexity. In this problem, given an undirected graph $G$ and a non-negative integer $k$, the objective is to test whether there exists a subset $S\subseteq V(G)$ of size at most $k$ such that $G-S$ is a forest. After a long line of improvement, recently, Li and Nederlof [SODA, 2020] designed a randomized algorithm for the problem running in time $\mathcal{O}^{\star}(2.7^k)$. In the Parameterized Complexity literature, several problems around Feedback Vertex Set have been studied. Some of these include Independent Feedback Vertex Set (where the set $S$ should be an independent set in $G$), Almost Forest Deletion and Pseudoforest Deletion. In Pseudoforest Deletion, each connected component in $G-S$ has at most one cycle in it. However, in Almost Forest Deletion, the input is a graph $G$ and non-negative integers $k,\ell \in \mathbb{N}$, and the objective is to test whether there exists a vertex subset $S$ of size at most $k$, such that $G-S$ is $\ell$ edges away from a forest. In this paper, using the methodology of Li and Nederlof [SODA, 2020], we obtain the current fastest algorithms for all these problems. In particular we obtain following randomized algorithms. 1) Independent Feedback Vertex Set can be solved in time $\mathcal{O}^{\star}(2.7^k)$. 2) Pseudo Forest Deletion can be solved in time $\mathcal{O}^{\star}(2.85^k)$. 3) Almost Forest Deletion can be solved in $\mathcal{O}^{\star}(\min\{2.85^k \cdot 8.54^\ell,2.7^k \cdot 36.61^\ell,3^k \cdot 1.78^\ell\})$.

cs.DS↗

arXiv2020

ETH-Tight Algorithms for Long Path and Cycle on Unit Disk Graphs

We present an algorithm for the extensively studied Long Path and Long Cycle problems on unit disk graphs that runs in time $2^{O(\sqrt{k})}(n+m)$. Under the Exponential Time Hypothesis, Long Path and Long Cycle on unit disk graphs cannot be solved in time $2^{o(\sqrt{k})}(n+m)^{O(1)}$ [de Berg et al., STOC 2018], hence our algorithm is optimal. Besides the $2^{O(\sqrt{k})}(n+m)^{O(1)}$-time algorithm for the (arguably) much simpler Vertex Cover problem by de Berg et al. [STOC 2018] (which easily follows from the existence of a $2k$-vertex kernel for the problem), this is the only known ETH-optimal fixed-parameter tractable algorithm on UDGs. Previously, Long Path and Long Cycle on unit disk graphs were only known to be solvable in time $2^{O(\sqrt{k}\log k)}(n+m)$. This algorithm involved the introduction of a new type of a tree decomposition, entailing the design of a very tedious dynamic programming procedure. Our algorithm is substantially simpler: we completely avoid the use of this new type of tree decomposition. Instead, we use a marking procedure to reduce the problem to (a weighted version of) itself on a standard tree decomposition of width $O(\sqrt{k})$.

cs.DS↗

arXiv2020

Structural Parameterizations with Modulator Oblivion

It is known that problems like Vertex Cover, Feedback Vertex Set and Odd Cycle Transversal are polynomial time solvable in the class of chordal graphs. We consider these problems in a graph that has at most $k$ vertices whose deletion results in a chordal graph, when parameterized by $k$. While this investigation fits naturally into the recent trend of what are called `structural parameterizations', here we assume that the deletion set is not given. One method to solve them is to compute a $k$-sized or an approximate ($f(k)$ sized, for a function $f$) chordal vertex deletion set and then use the structural properties of the graph to design an algorithm. This method leads to at least $k^{\mathcal{O}(k)}n^{\mathcal{O}(1)}$ running time when we use the known parameterized or approximation algorithms for finding a $k$-sized chordal deletion set on an $n$ vertex graph. In this work, we design $2^{\mathcal{O}(k)}n^{\mathcal{O}(1)}$ time algorithms for these problems. Our algorithms do not compute a chordal vertex deletion set (or even an approximate solution). Instead, we construct a tree decomposition of the given graph in time $2^{\mathcal{O}(k)}n^{\mathcal{O}(1)}$ where each bag is a union of four cliques and $\mathcal{O}(k)$ vertices. We then apply standard dynamic programming algorithms over this special tree decomposition. This special tree decomposition can be of independent interest. Our algorithms are adaptive (robust) in the sense that given an integer $k$, they detect whether the graph has a chordal vertex deletion set of size at most $k$ or output the special tree decomposition and solve the problem. We also show lower bounds for the problems we deal with under the Strong Exponential Time Hypothesis (SETH).

cs.DS↗

arXiv2020

Manipulating Districts to Win Elections: Fine-Grained Complexity

Gerrymandering is a practice of manipulating district boundaries and locations in order to achieve a political advantage for a particular party. Lewenberg, Lev, and Rosenschein [AAMAS 2017] initiated the algorithmic study of a geographically-based manipulation problem, where voters must vote at the ballot box closest to them. In this variant of gerrymandering, for a given set of possible locations of ballot boxes and known political preferences of $n$ voters, the task is to identify locations for $k$ boxes out of $m$ possible locations to guarantee victory of a certain party in at least $l$ districts. Here integers $k$ and $l$ are some selected parameter. It is known that the problem is NP-complete already for 4 political parties and prior to our work only heuristic algorithms for this problem were developed. We initiate the rigorous study of the gerrymandering problem from the perspectives of parameterized and fine-grained complexity and provide asymptotically matching lower and upper bounds on its computational complexity. We prove that the problem is W[1]-hard parameterized by $k+n$ and that it does not admit an $f(n,k)\cdot m^{o(\sqrt{k})}$ algorithm for any function $f$ of $k$ and $n$ only, unless Exponential Time Hypothesis (ETH) fails. Our lower bounds hold already for $2$ parties. On the other hand, we give an algorithm that solves the problem for a constant number of parties in time $(m+n)^{O(\sqrt{k})}$.

cs.DS↗

arXiv2020

Hitting Topological Minors is FPT

In the Topological Minor Deletion (TM-Deletion) problem input consists of an undirected graph $G$, a family of undirected graphs ${\cal F}$ and an integer $k$. The task is to determine whether $G$ contains a set of vertices $S$ of size at most $k$, such that the graph $G\setminus S$ obtained from $G$ by removing the vertices of $S$, contains no graph from ${\cal F}$ as a topological minor. We give an algorithm for TM-Deletionwith running time $f(h^\star,k)\cdot |V(G)|^{4}$. Here $h^\star$ is the maximum size of a graph in ${\cal F}$ and $f$ is a computable function of $h^\star$ and $k$. This is the first fixed parameter tractable algorithm (FPT) for the problem. In fact, even for the restricted case of planar inputs the first FPT algorithm was found only recently by Golovach et al. [SODA 2020]. For this case we improve upon the algorithm of Golovach et al. [SODA 2020] by designing an FPT algorithm with explicit dependence on $k$ and $h^\star$.

cs.DS↗

arXiv2019

On the Parameterized Complexity of Reconfiguration of Connected Dominating Sets

In a reconfiguration version of an optimization problem $\mathcal{Q}$ the input is an instance of $\mathcal{Q}$ and two feasible solutions $S$ and $T$. The objective is to determine whether there exists a step-by-step transformation between $S$ and $T$ such that all intermediate steps also constitute feasible solutions. In this work, we study the parameterized complexity of the \textsc{Connected Dominating Set Reconfiguration} problem (\textsc{CDS-R)}. It was shown in previous work that the \textsc{Dominating Set Reconfiguration} problem (\textsc{DS-R}) parameterized by $k$, the maximum allowed size of a dominating set in a reconfiguration sequence, is fixed-parameter tractable on all graphs that exclude a biclique $K_{d,d}$ as a subgraph, for some constant $d \geq 1$. We show that the additional connectivity constraint makes the problem much harder, namely, that \textsc{CDS-R} is \textsf{W}$[1]$-hard parameterized by $k+\ell$, the maximum allowed size of a dominating set plus the length of the reconfiguration sequence, already on $5$-degenerate graphs. On the positive side, we show that \textsc{CDS-R} parameterized by $k$ is fixed-parameter tractable, and in fact admits a polynomial kernel on planar graphs.

cs.DS↗

arXiv2019

Refined Complexity of PCA with Outliers

Principal component analysis (PCA) is one of the most fundamental procedures in exploratory data analysis and is the basic step in applications ranging from quantitative finance and bioinformatics to image analysis and neuroscience. However, it is well-documented that the applicability of PCA in many real scenarios could be constrained by an "immune deficiency" to outliers such as corrupted observations. We consider the following algorithmic question about the PCA with outliers. For a set of $n$ points in $\mathbb{R}^{d}$, how to learn a subset of points, say 1% of the total number of points, such that the remaining part of the points is best fit into some unknown $r$-dimensional subspace? We provide a rigorous algorithmic analysis of the problem. We show that the problem is solvable in time $n^{O(d^2)}$. In particular, for constant dimension the problem is solvable in polynomial time. We complement the algorithmic result by the lower bound, showing that unless Exponential Time Hypothesis fails, in time $f(d)n^{o(d)}$, for any function $f$ of $d$, it is impossible not only to solve the problem exactly but even to approximate it within a constant factor.

cs.DS↗

arXiv2019

Low-rank binary matrix approximation in column-sum norm

We consider $\ell_1$-Rank-$r$ Approximation over GF(2), where for a binary $m\times n$ matrix ${\bf A}$ and a positive integer $r$, one seeks a binary matrix ${\bf B}$ of rank at most $r$, minimizing the column-sum norm $||{\bf A} -{\bf B}||_1$. We show that for every $\varepsilon\in (0, 1)$, there is a randomized $(1+\varepsilon)$-approximation algorithm for $\ell_1$-Rank-$r$ Approximation over GF(2) of running time $m^{O(1)}n^{O(2^{4r}\cdot \varepsilon^{-4})}$. This is the first polynomial time approximation scheme (PTAS) for this problem.

cs.DS↗

arXiv2019

Decomposition of Map Graphs with Applications

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and Thomas that states that every planar graph either has a $\sqrt{k}\times \sqrt{k}$-grid as a minor, or its treewidth is $O(\sqrt{k})$. However, bidimensionality theory cannot be extended directly to several well-known classes of geometric graphs. Nevertheless, a relaxation of this lemma has been proven useful for unit disk graphs. Inspired by this, we prove a new decomposition lemma for map graphs. Informally, our lemma states the following. For any map graph $G$, there exists a collection $(U_1,\ldots,U_t)$ of cliques of $G$ with the following property: $G$ either contains a $\sqrt{k}\times \sqrt{k}$-grid as a minor, or it admits a tree decomposition where every bag is the union of $O(\sqrt{k})$ of the cliques in the above collection. The new lemma appears to be a handy tool in the design of subexponential parameterized algorithms on map graphs. We demonstrate its usability by designing algorithms on map graphs with running time $2^{O({\sqrt{k}\log{k}})} \cdot n^{O(1)}$ for the Connected Planar $\cal F$-Deletion problem (that encompasses problems such as Feedback Vertex Set and Vertex Cover). Obtaining subexponential algorithms for Longest Cycle/Path and Cycle Packing is more challenging. We have to construct tree decompositions with more powerful properties and to prove sublinear bounds on the number of ways an optimum solution could "cross" bags in these decompositions. For Longest Cycle/Path, these are the first subexponential-time parameterized algorithms on map graphs. For Feedback Vertex Set and Cycle Packing, we improve upon known $2^{O({k^{0.75}\log{k}})} \cdot n^{O(1)}$-time algorithms on map graphs.

cs.DS↗

arXiv2019

Going Far From Degeneracy

An undirected graph G is d-degenerate if every subgraph of G has a vertex of degree at most d. By the classical theorem of Erdős and Gallai from 1959, every graph of degeneracy d>1 contains a cycle of length at least d+1. The proof of Erdős and Gallai is constructive and can be turned into a polynomial time algorithm constructing a cycle of length at least d+1. But can we decide in polynomial time whether a graph contains a cycle of length at least d+2? An easy reduction from Hamiltonian Cycle provides a negative answer to this question: deciding whether a graph has a cycle of length at least d+2 is NP-complete. Surprisingly, the complexity of the problem changes drastically when the input graph is 2-connected. In this case we prove that deciding whether G contains a cycle of length at least d+k can be done in time 2^{O(k)}|V(G)|^{O(1)}. In other words, deciding whether a 2-connected n-vertex G contains a cycle of length at least d+log n can be done in polynomial time. Similar algorithmic results hold for long paths in graphs. We observe that deciding whether a graph has a path of length at least d+1 is NP-complete. However, we prove that if graph G is connected, then deciding whether G contains a path of length at least d+k can be done in time 2^{O(k)}n^{O(1)}. We complement these results by showing that the choice of degeneracy as the `above guarantee parameterization' is optimal in the following sense: For any ε>0 it is NP-complete to decide whether a connected (2-connected) graph of degeneracy d has a path (cycle) of length at least (1+ε)d.

cs.DS↗

arXiv2018

A 2-Approximation Algorithm for Feedback Vertex Set in Tournaments

A {\em tournament} is a directed graph $T$ such that every pair of vertices is connected by an arc. A {\em feedback vertex set} is a set $S$ of vertices in $T$ such that $T - S$ is acyclic. We consider the {\sc Feedback Vertex Set} problem in tournaments. Here the input is a tournament $T$ and a weight function $w : V(T) \rightarrow \mathbb{N}$ and the task is to find a feedback vertex set $S$ in $T$ minimizing $w(S) = \sum_{v \in S} w(v)$. We give the first polynomial time factor $2$ approximation algorithm for this problem. Assuming the Unique Games conjecture, this is the best possible approximation ratio achievable in polynomial time.

cs.DS↗