arXiv subjects

Fatih Calakli

Publications and source records attributed to Fatih Calakli.

2 recordsLinked to original sources

arXiv2026

MR-Compass: Inertial Navigation-Driven Motion Correction for Brain MRI

Inertial sensors can track object kinematics, however, unbounded drift from integrating noisy signals makes them impractical for MRI motion correction at millimeter resolution and minute-long scans. We introduce MR-Compass, which exploits the MRI system's static magnetic and gravitational fields to estimate 3-DOF orientation at 2 kHz directly, without integration, eliminating random-walk. The remaining 3-DOF translation is recovered via phase correlation from the MRI data. We experimentally validate the efficacy of the method retrospectively using a 3D radial koosh-ball sequence and prospectively using 2D EPI fMRI during large volunteer motions. MR-Compass followed by phase-correlation achieved a mean accuracy of 0.6$^o$ and 0.4 pixels across all experiments. Image quality improved when motion correction was applied in all volunteer scans for both retrospective and prospective correction cases. MR-Compass was effective in measuring head motion in the MRI scanner with high accuracy at unprecedented sample rates, and enabled both retrospective and prospective reconstruction to improve image quality by aligning the k-space data appropriately and by reducing the motion related artifacts.

eess.IV↗

arXiv2025

Radial spoke energy for self-navigated motion detection and position-ordered dynamic musculoskeletal MRI

Motion remains a key challenge in MRI, as both involuntary (e.g., head motion) and voluntary (e.g., joint motion) movement can degrade image quality or provide opportunities for dynamic assessment. Existing motion sensing methods, such as external tracking or navigator sequences, often require additional hardware, increase SAR, or demand sequence modification, which limits clinical flexibility. We propose a computationally efficient, self-navigated motion sensing technique based on spoke energy derived from 3D radial k-space data. Using the Fourier Slice and Parseval's theorems, spoke energy captures object-coil alignment and can be computed without altering the sequence. A sliding window summation improves robustness, and a second principal component analysis (2ndPCA) strategy yields a unified motion-sensitive signal. Beyond conventional head motion correction, we demonstrate the novel application of this method in enhancing dynamic 4D MRI of the ankle and knee under a continuous movement protocol. By sorting spokes based on position rather than time, we achieve motion-resolved reconstructions with improved anatomical clarity. This approach enables real-time motion detection and supports broader adoption of motion-aware dynamic MRI.

physics.med-ph↗