SearcharxivSearch

arXiv subjects

Felipe Jimenez-Angeles

Publications and source records attributed to Felipe Jimenez-Angeles.

9 recordsLinked to original sources

Interfacial Rheology of Lanthanide Binding Peptide Surfactants at the Air-Water Interface

Peptide surfactants (PEPS) are studied to capture and retain rare earth elements (REEs) at air-water interfaces to enable REE separations. Peptide sequences, designed to selectively bind REEs, depend crucially on the position of ligands within their binding loop domain. These ligands form a coordination sphere that wraps and retains the cation. We study variants of lanthanide binding tags (LBTs) designed to complex strongly with Tb$^{3+}$. The peptide LBT$^{5-}$ (with net charge -5) is known to bind Tb$^{3+}$ and adsorb with more REE cations than peptide molecules, suggesting that undesired non-specific Coulombic interactions occur. Rheological characterization of interfaces of LBT$^{5-}$ and Tb$^{3+}$ solutions reveal the formation of an interfacial gel. To probe whether this gelation reflects chelation among intact adsorbed LBT$^{5-}$:Tb$^{3+}$ complexes or destruction of the binding loop, we study a variant, LBT$^{3-}$, designed to form net neutral LBT$^{3-}$:Tb$^{3+}$ complexes. Solutions of LBT$^{3-}$ and Tb$^{3+}$ form purely viscous layers in the presence of excess Tb$^{3+}$, indicating that each peptide binds a single REE in an intact coordination sphere. We introduce the variant RR-LBT$^{3-}$ with net charge -3 and anionic ligands outside of the coordination sphere. We find that such exposed ligands promote interfacial gelation. Thus, a nuanced requirement for interfacial selectivity of PEPS is proposed: that anionic ligands outside of the coordination sphere must be avoided to prevent the non-selective recruitment of REE cations. This view is supported by simulation, including interfacial molecular dynamics simulations, and interfacial metadynamics simulations of the free energy landscape of the binding loop conformational space.

cond-mat.soft

Non-Reciprocal Interactions Induced by Water in Confinement

Water mediates electrostatic interactions via the orientation of its dipoles around ions, molecules, and interfaces. This induced water polarization consequently influences multiple phenomena. In particular, water polarization modulated by nanoconfinement affects ion adsorption and transport, biomolecular self-assembly, and surface chemical reactions. Therefore, it is of paramount importance to understand how water-mediated interactions change at the nanoscale. Here we show that near the graphene surface anion-cation interactions do not obey the translational and isotropic symmetries of Coulomb's law. We identify a new property, referred to as non-reciprocity, which describes the non-equivalent and directional interaction between two oppositely charged ions near the confining surface when their positions with respect to the interface are exchanged. Specifically, upon exchange of the two ions' positions along the surface normal direction the interaction energy changes by about 5$k_BT$. In both cases, confinement enhances the attraction between two oppositely charged ions near the graphene surface, while intercalation of one ion into the graphene layers shifts the interaction to repulsive. While the water permittivity in confinement is different from that in bulk, the effects observed here via molecular dynamics simulations and X-ray reflectivity experiments cannot be accounted for by current permittivity models. Our work shows that the water structure is not enough to infer electrostatic interactions near interfaces.

cond-mat.mtrl-sci

Population inversion of a NAHS mixture adsorbed into a cylindrical pore

A cylindrical nanopore immersed in a non-additive hard sphere binary fluid is studied by means of integral equation theories and Monte Carlo simulations. It is found that at low and intermediate values of the bulk total number density the more concentrated bulk species is preferentially absorbed by the pore, as expected. However, further increments of the bulk number density lead to an abrupt population inversion in the confined fluid and an entropy driven prewetting transition at the outside wall of the pore. These phenomena are a function of the pore size, the non-additivity parameter, the bulk number density, and particles relative number fraction. We discuss our results in relation to the phase separation in the bulk.

cond-mat.stat-mech

On the regimes of charge reversal

Charge reversal of the planar electrical double layer is studied by means of a well known integral equations theory. By a numerical analysis, a diagram is constructed with the onset points of charge reversal in the space of the fundamental variables of the system. Within this diagram two regimes of charge reversal are identified, referred to as oscillatory and non oscillatory. We found that these two regimes can be distinguished through a simple formula. Furthermore, a symmetry between electrostatic and size correlations in charge reversal is exhibited. The agreement of our results with other theories and molecular simulations data is discussed.

cond-mat.soft

A simple model for semipermeable membrane: Donnan equilibrium

We study a model for macroions in an electrolyte solution confined by a semipermeable membrane. The membrane finite thickness is considered and both membrane surfaces are uniformly charged. The model explicitly includes electrostatic and size particles correlations. Our study is focused on the adsorption of macroions on the membrane surface and on the osmotic pressure. The theoretical prediction for the osmotic pressure shows a good agreement with experimental results.

cond-mat.soft

Ion pairing in model electrolytes: A study via three particle correlation functions

A novel integral equations approach is applied for studying ion pairing in the restricted primitive model (RPM) electrolyte, i. e., the three point extension (TPE) to the Ornstein-Zernike integral equations. In the TPE approach, the three-particle correlation functions $g^{[3]}({\bf r}_{1},{\bf r}_{2},{\bf r}_{3})$ are obtained. The TPE results are compared to molecular dynamics (MD) simulations and other theories. Good agreement between TPE and MD is observed for a wide range of parameters, particularly where standard integral equations theories fail, i. e., low salt concentration and high ionic valence. Our results support the formation of ion pairs and aligned ion complexes.

cond-mat.soft

Overcharging of DNA in the presence of salt: Theory and Simulation

A study of a model rod-like polyelectrolyte molecule immersed into a monovalent or divalent electrolyte is presented. Results from the hypernetted-chain/mean spherical approximation (HNC/MSA) theory, for inhomogeneous charged fluids, {\ch are} compared with molecular dynamics (MD) simulations. As a particular case, the parameters of the polyelectrolyte molecule are mapped to those of a DNA molecule. An excellent qualitative, and in some cases quantitative, agreement between HNC/MSA and MD is found. Both, HNC/MSA and MD, predict the occurrence of overcharging, which is not present in the Poisson-Boltzmann theory. Mean electrostatic potential and local concentration profiles, $ζ$-potential and charge distribution functions are obtained and discussed in terms of the observed overcharging effect. Particularly interesting results are a very non-monotonic behavior of the $ζ$-potential, as a function of the rod charge density, and the overcharging by {\em monovalent} counterions.

cond-mat.soft

The effect of entropy on macroions adsorption

We study macroion adsorption on planar surfaces, through a simple model. The importance of entropy in the interfacial phenomena is stressed. Our results are in qualitative agreement with available computer simulations and experimental results on charge reversal and self-assembling at interfaces.

cond-mat.soft

Overcharging by macroions: above all, an entropy effect

Model macroion solutions next to a charged wall show interface \textit{true overcharging}, charge reversal and inversion, and layering. Macroion layering is present, even if the wall or the macroparticle are \textit{uncharged} or if the wall and macroions are like-charged. An effective long-range attractive force between the adsorbed macroions is implied. The results are obtained through an integral equation theory and a new extended Poisson-Boltzmann theory, and are in accordance with experiments on confined macroions and polymer layering.

physics.chem-ph