arXiv subjects

Felix Wagner

Publications and source records attributed to Felix Wagner.

At least 19 recordsLinked to original sources

arXiv2026

Interactive Analysis of Global Explanations using Aggregated Class Activation Maps for Network Data

Recent machine learning (ML) advances have demonstrated that deep learning (DL) achieves impressive results in different application domains, including the classification of computer network traffic to corresponding applications. However, the data frequently contains diverging patterns within a single predicted class. This presents a significant challenge to the ability to provide a clear and comprehensive explanation and emphasizes the necessity for tools capable of detecting and analyzing these patterns. Furthermore, the capacity to extract descriptive rules for classes is a crucial requirement in network traffic analysis and intrusion detection, particularly when leveraging advanced tools like next-generation firewalls. We provide a visual-interactive system that explains predictions of classes for network traffic. Global explanations derived from multiple samples of a given class contribute to understanding model predictions. Visualization of global explanations enables recognition of different patterns that offer experts a more comprehensive overview of its characteristics. We introduce a prototype that facilitates visual exploration and refinement of global explanations, enabling network experts to detect and refine new patterns for specific applications. These explanations support the identification of misleading features and the formulation of new rules for the management of networks. Our approach also aims at enabling ML experts to acquire new insights, including the possibility of separating or merging classes and the development of more accurate and reliable DL models. Our proposed prototype was evaluated by experts in machine learning and network analysis.

cs.HC↗

arXiv2026

Microwave Crosstalk in Planar Superconducting Quantum Devices

Microwave crosstalk poses a major challenge to scaling superconducting quantum devices as it introduces excess control errors. Although its magnitude and impact have been explored in various experimental settings, quantitative physical models capable of explaining measured crosstalk for a given device geometry remain scarce. Here, we address this gap by investigating microwave crosstalk in planar superconducting devices with crossovers. We identify two structures that can lead to strong crosstalk: a drive line routed in close proximity to another qubit, and a drive line crossing a qubit-qubit coupler using an air bridge. We design and characterize devices involving these structures and develop physical models that quantitatively explain the experimentally observed crosstalk. Based on these models, we discuss the design considerations for reducing microwave crosstalk. Our results provide practical guidance for low-crosstalk device layouts and establish a basis for the systematic investigation of weaker crosstalk mechanisms.

quant-ph↗

arXiv2026

Assessing the Sensitivity of Niobium- and Tantalum-Based Superconducting Qubits to Infrared Radiation

The use of tantalum films for superconducting qubits has recently extended qubit coherence times significantly, primarily due to reduced dielectric losses at the metal-air interface. However, the choice of base material also influences the sensitivity to quasiparticle-induced decoherence. In this study, we investigate quasiparticle tunneling rates in niobium and tantalum-based offset-charge-sensitive qubits. Using a source of thermal radiation, we characterize the sensitivity of either material to infrared radiation and explore the impact of the infrared background through the targeted use of in-line filters in the wiring and ambient infrared absorbers. We identify both radiation channels as significant contributions to decoherence for tantalum but not for niobium qubits and achieve tunneling rates of 100 Hz and 300 Hz for niobium and tantalum respectively upon installation of infrared filters. Additionally, we find a time-dependence in the observed tunneling rates on the scale of days, which we interpret as evidence of slowly cooling, thermally radiating components in the experimental setup. Our findings indicate that continued improvements in coherence times may require renewed attention to radiative backgrounds and experimental setup design, especially when introducing new material platforms.

quant-ph↗

arXiv2025

Modality-Agnostic Input Channels Enable Segmentation of Brain lesions in Multimodal MRI with Sequences Unavailable During Training

Segmentation models are important tools for the detection and analysis of lesions in brain MRI. Depending on the type of brain pathology that is imaged, MRI scanners can acquire multiple, different image modalities (contrasts). Most segmentation models for multimodal brain MRI are restricted to fixed modalities and cannot effectively process new ones at inference. Some models generalize to unseen modalities but may lose discriminative modality-specific information. This work aims to develop a model that can perform inference on data that contain image modalities unseen during training, previously seen modalities, and heterogeneous combinations of both, thus allowing a user to utilize any available imaging modalities. We demonstrate this is possible with a simple, thus practical alteration to the U-net architecture, by integrating a modality-agnostic input channel or pathway, alongside modality-specific input channels. To train this modality-agnostic component, we develop an image augmentation scheme that synthesizes artificial MRI modalities. Augmentations differentially alter the appearance of pathological and healthy brain tissue to create artificial contrasts between them while maintaining realistic anatomical integrity. We evaluate the method using 8 MRI databases that include 5 types of pathologies (stroke, tumours, traumatic brain injury, multiple sclerosis and white matter hyperintensities) and 8 modalities (T1, T1+contrast, T2, PD, SWI, DWI, ADC and FLAIR). The results demonstrate that the approach preserves the ability to effectively process MRI modalities encountered during training, while being able to process new, unseen modalities to improve its segmentation. Project code: https://github.com/Anthony-P-Addison/AGN-MOD-SEG

cs.CV↗

arXiv2025

DIsoN: Decentralized Isolation Networks for Out-of-Distribution Detection in Medical Imaging

Safe deployment of machine learning (ML) models in safety-critical domains such as medical imaging requires detecting inputs with characteristics not seen during training, known as out-of-distribution (OOD) detection, to prevent unreliable predictions. Effective OOD detection after deployment could benefit from access to the training data, enabling direct comparison between test samples and the training data distribution to identify differences. State-of-the-art OOD detection methods, however, either discard the training data after deployment or assume that test samples and training data are centrally stored together, an assumption that rarely holds in real-world settings. This is because shipping the training data with the deployed model is usually impossible due to the size of training databases, as well as proprietary or privacy constraints. We introduce the Isolation Network, an OOD detection framework that quantifies the difficulty of separating a target test sample from the training data by solving a binary classification task. We then propose Decentralized Isolation Networks (DIsoN), which enables the comparison of training and test data when data-sharing is impossible, by exchanging only model parameters between the remote computational nodes of training and deployment. We further extend DIsoN with class-conditioning, comparing a target sample solely with training data of its predicted class. We evaluate DIsoN on four medical imaging datasets (dermatology, chest X-ray, breast ultrasound, histopathology) across 12 OOD detection tasks. DIsoN performs favorably against existing methods while respecting data-privacy. This decentralized OOD detection framework opens the way for a new type of service that ML developers could provide along with their models: providing remote, secure utilization of their training data for OOD detection services. Code: https://github.com/FelixWag/DIsoN

cs.CV↗

arXiv2025

Low-Energy Backgrounds in Solid-State Phonon and Charge Detectors

Solid-state phonon and charge detectors probe the scattering of weakly interacting particles, such as dark matter and neutrinos, through their low recoil thresholds. Recent advancements have pushed sensitivity to eV-scale energy depositions, uncovering previously-unseen low-energy excess backgrounds. While some arise from known processes such as thermal radiation, luminescence, and stress, others remain unexplained. This review examines these backgrounds, their possible origins, and parallels to low-energy effects in solids. Their understanding is essential for interpreting particle interactions at and below the eV-scale.

physics.ins-det↗

arXiv2025

SurGrID: Controllable Surgical Simulation via Scene Graph to Image Diffusion

Surgical simulation offers a promising addition to conventional surgical training. However, available simulation tools lack photorealism and rely on hardcoded behaviour. Denoising Diffusion Models are a promising alternative for high-fidelity image synthesis, but existing state-of-the-art conditioning methods fall short in providing precise control or interactivity over the generated scenes. We introduce SurGrID, a Scene Graph to Image Diffusion Model, allowing for controllable surgical scene synthesis by leveraging Scene Graphs. These graphs encode a surgical scene's components' spatial and semantic information, which are then translated into an intermediate representation using our novel pre-training step that explicitly captures local and global information. Our proposed method improves the fidelity of generated images and their coherence with the graph input over the state-of-the-art. Further, we demonstrate the simulation's realism and controllability in a user assessment study involving clinical experts. Scene Graphs can be effectively used for precise and interactive conditioning of Denoising Diffusion Models for simulating surgical scenes, enabling high fidelity and interactive control over the generated content.

cs.CV↗

arXiv2024

FedPIA -- Permuting and Integrating Adapters leveraging Wasserstein Barycenters for Finetuning Foundation Models in Multi-Modal Federated Learning

Large Vision-Language Models typically require large text and image datasets for effective fine-tuning. However, collecting data from various sites, especially in healthcare, is challenging due to strict privacy regulations. An alternative is to fine-tune these models on end-user devices, such as in medical clinics, without sending data to a server. These local clients typically have limited computing power and small datasets, which are not enough for fully fine-tuning large VLMs on their own. A naive solution to these scenarios is to leverage parameter-efficient fine-tuning (PEFT) strategies and apply federated learning (FL) algorithms to combine the learned adapter weights, thereby respecting the resource limitations and data privacy. However, this approach does not fully leverage the knowledge from multiple adapters trained on diverse data distributions and for diverse tasks. The adapters are adversely impacted by data heterogeneity and task heterogeneity across clients resulting in suboptimal convergence. To this end, we propose a novel framework called FedPIA that improves upon the naive combinations of FL and PEFT by introducing Permutation and Integration of the local Adapters in the server and global Adapters in the clients exploiting Wasserstein barycenters for improved blending of client-specific and client-agnostic knowledge. This layerwise permutation helps to bridge the gap in the parameter space of local and global adapters before integration. We conduct over 2000 client-level experiments utilizing 48 medical image datasets across five different medical vision-language FL task settings encompassing visual question answering as well as image and report-based multi-label disease detection. Our experiments involving diverse client settings, ten different modalities, and two VLM backbones demonstrate that FedPIA consistently outperforms the state-of-the-art PEFT-FL baselines.

cs.CV↗

arXiv2024

F$^3$OCUS -- Federated Finetuning of Vision-Language Foundation Models with Optimal Client Layer Updating Strategy via Multi-objective Meta-Heuristics

Effective training of large Vision-Language Models (VLMs) on resource-constrained client devices in Federated Learning (FL) requires the usage of parameter-efficient fine-tuning (PEFT) strategies. To this end, we demonstrate the impact of two factors \textit{viz.}, client-specific layer importance score that selects the most important VLM layers for fine-tuning and inter-client layer diversity score that encourages diverse layer selection across clients for optimal VLM layer selection. We first theoretically motivate and leverage the principal eigenvalue magnitude of layerwise Neural Tangent Kernels and show its effectiveness as client-specific layer importance score. Next, we propose a novel layer updating strategy dubbed F$^3$OCUS that jointly optimizes the layer importance and diversity factors by employing a data-free, multi-objective, meta-heuristic optimization on the server. We explore 5 different meta-heuristic algorithms and compare their effectiveness for selecting model layers and adapter layers towards PEFT-FL. Furthermore, we release a new MedVQA-FL dataset involving overall 707,962 VQA triplets and 9 modality-specific clients and utilize it to train and evaluate our method. Overall, we conduct more than 10,000 client-level experiments on 6 Vision-Language FL task settings involving 58 medical image datasets and 4 different VLM architectures of varying sizes to demonstrate the effectiveness of the proposed method.

cs.CV↗

arXiv2024

Feasibility of Federated Learning from Client Databases with Different Brain Diseases and MRI Modalities

Segmentation models for brain lesions in MRI are typically developed for a specific disease and trained on data with a predefined set of MRI modalities. Such models cannot segment the disease using data with a different set of MRI modalities, nor can they segment other types of diseases. Moreover, this training paradigm prevents a model from using the advantages of learning from heterogeneous databases that may contain scans and segmentation labels for different brain pathologies and diverse sets of MRI modalities. Additionally, the confidentiality of patient data often prevents central data aggregation, necessitating a decentralized approach. Is it feasible to use Federated Learning (FL) to train a single model on client databases that contain scans and labels of different brain pathologies and diverse sets of MRI modalities? We demonstrate promising results by combining appropriate, simple, and practical modifications to the model and training strategy: Designing a model with input channels that cover the whole set of modalities available across clients, training with random modality drop, and exploring the effects of feature normalization methods. Evaluation on 7 brain MRI databases with 5 different diseases shows that this FL framework can train a single model achieving very promising results in segmenting all disease types seen during training. Importantly, it can segment these diseases in new databases that contain sets of modalities different from those in training clients. These results demonstrate, for the first time, the feasibility and effectiveness of using FL to train a single 3D segmentation model on decentralised data with diverse brain diseases and MRI modalities, a necessary step towards leveraging heterogeneous real-world databases. Code: https://github.com/FelixWag/FedUniBrain

eess.IV↗

arXiv2024

Feasibility and benefits of joint learning from MRI databases with different brain diseases and modalities for segmentation

Models for segmentation of brain lesions in multi-modal MRI are commonly trained for a specific pathology using a single database with a predefined set of MRI modalities, determined by a protocol for the specific disease. This work explores the following open questions: Is it feasible to train a model using multiple databases that contain varying sets of MRI modalities and annotations for different brain pathologies? Will this joint learning benefit performance on the sets of modalities and pathologies available during training? Will it enable analysis of new databases with different sets of modalities and pathologies? We develop and compare different methods and show that promising results can be achieved with appropriate, simple and practical alterations to the model and training framework. We experiment with 7 databases containing 5 types of brain pathologies and different sets of MRI modalities. Results demonstrate, for the first time, that joint training on multi-modal MRI databases with different brain pathologies and sets of modalities is feasible and offers practical benefits. It enables a single model to segment pathologies encountered during training in diverse sets of modalities, while facilitating segmentation of new types of pathologies such as via follow-up fine-tuning. The insights this study provides into the potential and limitations of this paradigm should prove useful for guiding future advances in the direction. Code and pretrained models: https://github.com/WenTXuL/MultiUnet

cs.CV↗

arXiv2024

Examining Modality Incongruity in Multimodal Federated Learning for Medical Vision and Language-based Disease Detection

Multimodal Federated Learning (MMFL) utilizes multiple modalities in each client to build a more powerful Federated Learning (FL) model than its unimodal counterpart. However, the impact of missing modality in different clients, also called modality incongruity, has been greatly overlooked. This paper, for the first time, analyses the impact of modality incongruity and reveals its connection with data heterogeneity across participating clients. We particularly inspect whether incongruent MMFL with unimodal and multimodal clients is more beneficial than unimodal FL. Furthermore, we examine three potential routes of addressing this issue. Firstly, we study the effectiveness of various self-attention mechanisms towards incongruity-agnostic information fusion in MMFL. Secondly, we introduce a modality imputation network (MIN) pre-trained in a multimodal client for modality translation in unimodal clients and investigate its potential towards mitigating the missing modality problem. Thirdly, we assess the capability of client-level and server-level regularization techniques towards mitigating modality incongruity effects. Experiments are conducted under several MMFL settings on two publicly available real-world datasets, MIMIC-CXR and Open-I, with Chest X-Ray and radiology reports.

cs.LG↗

arXiv2023

The built environment and induced transport CO2 emissions: A double machine learning approach to account for residential self-selection

Understanding why travel behavior differs between residents of urban centers and suburbs is key to sustainable urban planning. Especially in light of rapid urban growth, identifying housing locations that minimize travel demand and induced CO2 emissions is crucial to mitigate climate change. While the built environment plays an important role, the precise impact on travel behavior is obfuscated by residential self-selection. To address this issue, we propose a double machine learning approach to obtain unbiased, spatially-explicit estimates of the effect of the built environment on travel-related CO2 emissions for each neighborhood by controlling for residential self-selection. We examine how socio-demographics and travel-related attitudes moderate the effect and how it decomposes across the 5Ds of the built environment. Based on a case study for Berlin and the travel diaries of 32,000 residents, we find that the built environment causes household travel-related CO2 emissions to differ by a factor of almost two between central and suburban neighborhoods in Berlin. To highlight the practical importance for urban climate mitigation, we evaluate current plans for 64,000 new residential units in terms of total induced transport CO2 emissions. Our findings underscore the significance of spatially differentiated compact development to decarbonize the transport sector.

cs.LG↗

arXiv2023

Using machine learning to understand causal relationships between urban form and travel CO2 emissions across continents

Climate change mitigation in urban mobility requires policies reconfiguring urban form to increase accessibility and facilitate low-carbon modes of transport. However, current policy research has insufficiently assessed urban form effects on car travel at three levels: (1) Causality -- Can causality be established beyond theoretical and correlation-based analyses? (2) Generalizability -- Do relationships hold across different cities and world regions? (3) Context specificity -- How do relationships vary across neighborhoods of a city? Here, we address all three gaps via causal graph discovery and explainable machine learning to detect urban form effects on intra-city car travel, based on mobility data of six cities across three continents. We find significant causal effects of urban form on trip emissions and inter-feature effects, which had been neglected in previous work. Our results demonstrate that destination accessibility matters most overall, while low density and low connectivity also sharply increase CO$_2$ emissions. These general trends are similar across cities but we find idiosyncratic effects that can lead to substantially different recommendations. In more monocentric cities, we identify spatial corridors -- about 10--50 km from the city center -- where subcenter-oriented development is more relevant than increased access to the main center. Our work demonstrates a novel application of machine learning that enables new research addressing the needs of causality, generalizability, and contextual specificity for scaling evidence-based urban climate solutions.

cs.LG↗

arXiv2023

Post-Deployment Adaptation with Access to Source Data via Federated Learning and Source-Target Remote Gradient Alignment

Deployment of Deep Neural Networks in medical imaging is hindered by distribution shift between training data and data processed after deployment, causing performance degradation. Post-Deployment Adaptation (PDA) addresses this by tailoring a pre-trained, deployed model to the target data distribution using limited labelled or entirely unlabelled target data, while assuming no access to source training data as they cannot be deployed with the model due to privacy concerns and their large size. This makes reliable adaptation challenging due to limited learning signal. This paper challenges this assumption and introduces FedPDA, a novel adaptation framework that brings the utility of learning from remote data from Federated Learning into PDA. FedPDA enables a deployed model to obtain information from source data via remote gradient exchange, while aiming to optimize the model specifically for the target domain. Tailored for FedPDA, we introduce a novel optimization method StarAlign (Source-Target Remote Gradient Alignment) that aligns gradients between source-target domain pairs by maximizing their inner product, to facilitate learning a target-specific model. We demonstrate the method's effectiveness using multi-center databases for the tasks of cancer metastases detection and skin lesion classification, where our method compares favourably to previous work. Code is available at: https://github.com/FelixWag/StarAlign

cs.CV↗

arXiv2023

Modality Cycles with Masked Conditional Diffusion for Unsupervised Anomaly Segmentation in MRI

Unsupervised anomaly segmentation aims to detect patterns that are distinct from any patterns processed during training, commonly called abnormal or out-of-distribution patterns, without providing any associated manual segmentations. Since anomalies during deployment can lead to model failure, detecting the anomaly can enhance the reliability of models, which is valuable in high-risk domains like medical imaging. This paper introduces Masked Modality Cycles with Conditional Diffusion (MMCCD), a method that enables segmentation of anomalies across diverse patterns in multimodal MRI. The method is based on two fundamental ideas. First, we propose the use of cyclic modality translation as a mechanism for enabling abnormality detection. Image-translation models learn tissue-specific modality mappings, which are characteristic of tissue physiology. Thus, these learned mappings fail to translate tissues or image patterns that have never been encountered during training, and the error enables their segmentation. Furthermore, we combine image translation with a masked conditional diffusion model, which attempts to `imagine' what tissue exists under a masked area, further exposing unknown patterns as the generative model fails to recreate them. We evaluate our method on a proxy task by training on healthy-looking slices of BraTS2021 multi-modality MRIs and testing on slices with tumors. We show that our method compares favorably to previous unsupervised approaches based on image reconstruction and denoising with autoencoders and diffusion models.

eess.IV↗

arXiv2022

Cait: analysis toolkit for cryogenic particle detectors in Python

Cryogenic solid state detectors are widely used in dark matter and neutrino experiments, and require a sensible raw data analysis. For this purpose, we present Cait, an open source Python package with all essential methods for the analysis of detector modules fully integrable with the Python ecosystem for scientific computing and machine learning. It comes with methods for triggering of events from continuously sampled streams, identification of particle recoils and artifacts in a low signal-to-noise ratio environment, the reconstruction of deposited energies, and the simulation of a variety of typical event types. Furthermore, by connecting Cait with existing machine learning frameworks we introduce novel methods, for better automation in data cleaning and background rejection.

physics.ins-det↗

arXiv2022

Snowmass2021 Cosmic Frontier White Paper: Puzzling Excesses in Dark Matter Searches and How to Resolve Them

Intriguing signals with excesses over expected backgrounds have been observed in many astrophysical and terrestrial settings, which could potentially have a dark matter origin. Astrophysical excesses include the Galactic Center GeV gamma-ray excess detected by the Fermi Gamma-Ray Space Telescope, the AMS antiproton and positron excesses, and the 511 and 3.5 keV X-ray lines. Direct detection excesses include the DAMA/LIBRA annual modulation signal, the XENON1T excess, and low-threshold excesses in solid state detectors. We discuss avenues to resolve these excesses, with actions the field can take over the next several years.

hep-ph↗