arXiv subjects

Feng Xie

Publications and source records attributed to Feng Xie.

At least 55 records · Page 3Linked to original sources

arXiv2023

Microwave electrometry with Rydberg atoms in a vapor cell using microwave amplitude modulation

We have theoretically and experimentally studied the dispersive signal of the Rydberg atomic electromagnetically induced transparency (EIT) - Autler-Townes (AT) splitting spectra obtained using amplitude modulation of the microwave (MW) field. In addition to the two zero-crossing points, the dispersion signal has two positive maxima with an interval defined as the shoulder interval of the dispersion signal $Δf_{\text{sho}}$. The relationship of MW field strength $E_{\text{MW}}$ and $Δf_{\text{sho}}$ are studied at the MW frequencies of 31.6 GHz, 22.1 GHz, and 9.2 GHz respectively. The results show that $Δf_{\text{sho}}$ can be used to character the much weaker $E_{\text{MW}}$ than the interval of two zero-crossing points $Δf_{\text{zeros}}$ and the traditional EIT-AT splitting interval $Δf_{\text{m}}$, the minimum $E_{\text{MW}}$ measured by $Δf_{\text{sho}}$ is about 30 times smaller than that by $Δf_{\text{m}}$. As an example, the minimum $E_{\text{MW}}$ at 9.2 GHz that can be characterized by $Δf_{\text{sho}}$ is 0.056 mV/cm, which is the minimum value characterized by frequency interval using vapour cell without adding any auxiliary fields. The proposed method can improve the weak limit and sensitivity of $E_{\text{MW}}$ measured by spectral frequency interval, which is important in the direct measurement of weak $E_{\text{MW}}$.

physics.atom-ph↗

arXiv2023

Federated and distributed learning applications for electronic health records and structured medical data: A scoping review

Federated learning (FL) has gained popularity in clinical research in recent years to facilitate privacy-preserving collaboration. Structured data, one of the most prevalent forms of clinical data, has experienced significant growth in volume concurrently, notably with the widespread adoption of electronic health records in clinical practice. This review examines FL applications on structured medical data, identifies contemporary limitations and discusses potential innovations. We searched five databases, SCOPUS, MEDLINE, Web of Science, Embase, and CINAHL, to identify articles that applied FL to structured medical data and reported results following the PRISMA guidelines. Each selected publication was evaluated from three primary perspectives, including data quality, modeling strategies, and FL frameworks. Out of the 1160 papers screened, 34 met the inclusion criteria, with each article consisting of one or more studies that used FL to handle structured clinical/medical data. Of these, 24 utilized data acquired from electronic health records, with clinical predictions and association studies being the most common clinical research tasks that FL was applied to. Only one article exclusively explored the vertical FL setting, while the remaining 33 explored the horizontal FL setting, with only 14 discussing comparisons between single-site (local) and FL (global) analysis. The existing FL applications on structured medical data lack sufficient evaluations of clinically meaningful benefits, particularly when compared to single-site analyses. Therefore, it is crucial for future FL applications to prioritize clinical motivations and develop designs and methodologies that can effectively support and aid clinical practice and research.

cs.LG↗

arXiv2023

Multi-Arm Robot Task Planning for Fruit Harvesting Using Multi-Agent Reinforcement Learning

The emergence of harvesting robotics offers a promising solution to the issue of limited agricultural labor resources and the increasing demand for fruits. Despite notable advancements in the field of harvesting robotics, the utilization of such technology in orchards is still limited. The key challenge is to improve operational efficiency. Taking into account inner-arm conflicts, couplings of DoFs, and dynamic tasks, we propose a task planning strategy for a harvesting robot with four arms in this paper. The proposed method employs a Markov game framework to formulate the four-arm robotic harvesting task, which avoids the computational complexity of solving an NP-hard scheduling problem. Furthermore, a multi-agent reinforcement learning (MARL) structure with a fully centralized collaboration protocol is used to train a MARL-based task planning network. Several simulations and orchard experiments are conducted to validate the effectiveness of the proposed method for a multi-arm harvesting robot in comparison with the existing method.

cs.RO↗

arXiv2023

FedScore: A privacy-preserving framework for federated scoring system development

We propose FedScore, a privacy-preserving federated learning framework for scoring system generation across multiple sites to facilitate cross-institutional collaborations. The FedScore framework includes five modules: federated variable ranking, federated variable transformation, federated score derivation, federated model selection and federated model evaluation. To illustrate usage and assess FedScore's performance, we built a hypothetical global scoring system for mortality prediction within 30 days after a visit to an emergency department using 10 simulated sites divided from a tertiary hospital in Singapore. We employed a pre-existing score generator to construct 10 local scoring systems independently at each site and we also developed a scoring system using centralized data for comparison. We compared the acquired FedScore model's performance with that of other scoring models using the receiver operating characteristic (ROC) analysis. The FedScore model achieved an average area under the curve (AUC) value of 0.763 across all sites, with a standard deviation (SD) of 0.020. We also calculated the average AUC values and SDs for each local model, and the FedScore model showed promising accuracy and stability with a high average AUC value which was closest to the one of the pooled model and SD which was lower than that of most local models. This study demonstrates that FedScore is a privacy-preserving scoring system generator with potentially good generalizability.

cs.LG↗

arXiv2023

Adversarial Learning-based Stance Classifier for COVID-19-related Health Policies

The ongoing COVID-19 pandemic has caused immeasurable losses for people worldwide. To contain the spread of the virus and further alleviate the crisis, various health policies (e.g., stay-at-home orders) have been issued which spark heated discussions as users turn to share their attitudes on social media. In this paper, we consider a more realistic scenario on stance detection (i.e., cross-target and zero-shot settings) for the pandemic and propose an adversarial learning-based stance classifier to automatically identify the public's attitudes toward COVID-19-related health policies. Specifically, we adopt adversarial learning that allows the model to train on a large amount of labeled data and capture transferable knowledge from source topics, so as to enable generalize to the emerging health policies with sparse labeled data. To further enhance the model's deeper understanding, we incorporate policy descriptions as external knowledge into the model. Meanwhile, a GeoEncoder is designed which encourages the model to capture unobserved background factors specified by each region and then represent them as non-text information. We evaluate the performance of a broad range of baselines on the stance detection task for COVID-19-related health policies, and experimental results show that our proposed method achieves state-of-the-art performance in both cross-target and zero-shot settings.

cs.CL↗

arXiv2022

Handling missing values in healthcare data: A systematic review of deep learning-based imputation techniques

Objective: The proper handling of missing values is critical to delivering reliable estimates and decisions, especially in high-stakes fields such as clinical research. The increasing diversity and complexity of data have led many researchers to develop deep learning (DL)-based imputation techniques. We conducted a systematic review to evaluate the use of these techniques, with a particular focus on data types, aiming to assist healthcare researchers from various disciplines in dealing with missing values. Methods: We searched five databases (MEDLINE, Web of Science, Embase, CINAHL, and Scopus) for articles published prior to August 2021 that applied DL-based models to imputation. We assessed selected publications from four perspectives: health data types, model backbone (i.e., main architecture), imputation strategies, and comparison with non-DL-based methods. Based on data types, we created an evidence map to illustrate the adoption of DL models. Results: We included 64 articles, of which tabular static (26.6%, 17/64) and temporal data (37.5%, 24/64) were the most frequently investigated. We found that model backbone(s) differed among data types as well as the imputation strategy. The "integrated" strategy, that is, the imputation task being solved concurrently with downstream tasks, was popular for tabular temporal (50%, 12/24) and multi-modal data (71.4%, 5/7), but limited for other data types. Moreover, DL-based imputation methods yielded better imputation accuracy in most studies, compared with non-DL-based methods. Conclusion: DL-based imputation models can be customized based on data type, addressing the corresponding missing patterns, and its associated "integrated" strategy can enhance the efficacy of imputation, especially in scenarios where data is complex. Future research may focus on the portability and fairness of DL-based models for healthcare data imputation.

cs.LG↗

arXiv2022

Zero-shot stance detection based on cross-domain feature enhancement by contrastive learning

Zero-shot stance detection is challenging because it requires detecting the stance of previously unseen targets in the inference phase. The ability to learn transferable target-invariant features is critical for zero-shot stance detection. In this work, we propose a stance detection approach that can efficiently adapt to unseen targets, the core of which is to capture target-invariant syntactic expression patterns as transferable knowledge. Specifically, we first augment the data by masking the topic words of sentences, and then feed the augmented data to an unsupervised contrastive learning module to capture transferable features. Then, to fit a specific target, we encode the raw texts as target-specific features. Finally, we adopt an attention mechanism, which combines syntactic expression patterns with target-specific features to obtain enhanced features for predicting previously unseen targets. Experiments demonstrate that our model outperforms competitive baselines on four benchmark datasets.

cs.CL↗

arXiv2022

Latent Hierarchical Causal Structure Discovery with Rank Constraints

Most causal discovery procedures assume that there are no latent confounders in the system, which is often violated in real-world problems. In this paper, we consider a challenging scenario for causal structure identification, where some variables are latent and they form a hierarchical graph structure to generate the measured variables; the children of latent variables may still be latent and only leaf nodes are measured, and moreover, there can be multiple paths between every pair of variables (i.e., it is beyond tree structure). We propose an estimation procedure that can efficiently locate latent variables, determine their cardinalities, and identify the latent hierarchical structure, by leveraging rank deficiency constraints over the measured variables. We show that the proposed algorithm can find the correct Markov equivalence class of the whole graph asymptotically under proper restrictions on the graph structure.

cs.LG↗

arXiv2022

Vanishing viscosity limit for compressible magnetohydrodynamics equations with transverse background magnetic field

We are concerned with the uniform regularity estimates and vanishing viscosity limit of solution to two dimensional viscous compressible magnetohydrodynamics (MHD) equations with transverse background magnetic field. When the magnetic field is assumed to be transverse to the boundary and the tangential component of magnetic field satisfies zero Neumann boundary condition, even though the velocity is imposed the no-slip boundary condition, the uniform regularity estimates of solution and its derivatives still can be achieved in suitable conormal Sobolev spaces in the half plane $\mathbb{R}^2_+$, and then the vanishing viscosity limit is justified in $L^\infty$ sense based on these uniform regularity estimates and some compactness arguments. At the same time, together with \cite{CLX21}, our results show that the transverse background magnetic field can prevent the strong boundary layer from occurring for compressible magnetohydrodynamics whether there is magnetic diffusion or not.

math.AP↗

arXiv2022

Inter- and Intra-Series Embeddings Fusion Network for Epidemiological Forecasting

The accurate forecasting of infectious epidemic diseases is the key to effective control of the epidemic situation in a region. Most existing methods ignore potential dynamic dependencies between regions or the importance of temporal dependencies and inter-dependencies between regions for prediction. In this paper, we propose an Inter- and Intra-Series Embeddings Fusion Network (SEFNet) to improve epidemic prediction performance. SEFNet consists of two parallel modules, named Inter-Series Embedding Module and Intra-Series Embedding Module. In Inter-Series Embedding Module, a multi-scale unified convolution component called Region-Aware Convolution is proposed, which cooperates with self-attention to capture dynamic dependencies between time series obtained from multiple regions. The Intra-Series Embedding Module uses Long Short-Term Memory to capture temporal relationships within each time series. Subsequently, we learn the influence degree of two embeddings and fuse them with the parametric-matrix fusion method. To further improve the robustness, SEFNet also integrates a traditional autoregressive component in parallel with nonlinear neural networks. Experiments on four real-world epidemic-related datasets show SEFNet is effective and outperforms state-of-the-art baselines.

cs.LG↗

arXiv2022

EpiGNN: Exploring Spatial Transmission with Graph Neural Network for Regional Epidemic Forecasting

Epidemic forecasting is the key to effective control of epidemic transmission and helps the world mitigate the crisis that threatens public health. To better understand the transmission and evolution of epidemics, we propose EpiGNN, a graph neural network-based model for epidemic forecasting. Specifically, we design a transmission risk encoding module to characterize local and global spatial effects of regions in epidemic processes and incorporate them into the model. Meanwhile, we develop a Region-Aware Graph Learner (RAGL) that takes transmission risk, geographical dependencies, and temporal information into account to better explore spatial-temporal dependencies and makes regions aware of related regions' epidemic situations. The RAGL can also combine with external resources, such as human mobility, to further improve prediction performance. Comprehensive experiments on five real-world epidemic-related datasets (including influenza and COVID-19) demonstrate the effectiveness of our proposed method and show that EpiGNN outperforms state-of-the-art baselines by 9.48% in RMSE.

q-bio.QM↗

arXiv2022

Long time well-posedness of compressible magnetohydrodynamics boundary layer equations in Sobolev space

In this paper we consider the long time well-posedness of solutions to two dimensional compressible magnetohydrodynamics (MHD) boundary layer equations. When the initial data is a small perturbation of a steady solution with size of $\varepsilon$ and the far-field state is also a small perturbation around such a steady solution in Sobolev space, then the lifespan of solutions is proved to be greater than $\varepsilon^{-\frac43}$.

math.AP↗

arXiv2022

Remarks on Sharp Interface Limit for an Incompressible Navier-Stokes and Allen-Cahn Coupled System

We are concerned with the sharp interface limit for an incompressible Navier-Stokes and Allen-Cahn coupled system in this paper. When the thickness of the diffuse interfacial zone, which is parameterized by $\varepsilon$, goes to zero, we prove that a solution of the incompressible Navier-Stokes and Allen-Cahn coupled system converges to a solution of a sharp interface model in the $L^\infty(L^2)\cap L^2(H^1)$ sense on a uniform time interval independent of the small parameter $\varepsilon$. The proof consists of two parts: one is the construction of a suitable approximate solution and another is the estimate of the error functions in Sobolev spaces. Besides the careful energy estimates, a spectral estimate of the linearized operator for the incompressible Navier-Stokes and Allen-Cahn coupled system around the approximate solution is essentially used to derive the uniform estimates of the error functions. The convergence of the velocity is well expected due to the fact that the layer of the velocity across the diffuse interfacial zone is relatively weak.

math.AP↗

arXiv2022

Large time behavior of solutions to a diffusion approximation radiation hydrodynamics model

This paper concerns with the large time behavior of solutions to a diffusion approximation radiation hydrodynamics model when the initial data is a small perturbation around an equilibrium state. The global-in-time well-posedness of solutions is achieved in Sobolev spaces depending on the Littlewood-Paley decomposition technique together with certain elaborate energy estimates in frequency space. Moreover, the optimal decay rate of the solution is also yielded provided the initial data also satisfy an additional $L^1$ condition. Meanwhile, the similar results of the diffusion approximation system without the thermal conductivity could be also established.

math.AP↗

arXiv2022

Causal Discovery with Multi-Domain LiNGAM for Latent Factors

Discovering causal structures among latent factors from observed data is a particularly challenging problem. Despite some efforts for this problem, existing methods focus on the single-domain data only. In this paper, we propose Multi-Domain Linear Non-Gaussian Acyclic Models for Latent Factors (MD-LiNA), where the causal structure among latent factors of interest is shared for all domains, and we provide its identification results. The model enriches the causal representation for multi-domain data. We propose an integrated two-phase algorithm to estimate the model. In particular, we first locate the latent factors and estimate the factor loading matrix. Then to uncover the causal structure among shared latent factors of interest, we derive a score function based on the characterization of independence relations between external influences and the dependence relations between multi-domain latent factors and latent factors of interest. We show that the proposed method provides locally consistent estimators. Experimental results on both synthetic and real-world data demonstrate the efficacy and robustness of our approach.

cs.LG↗

arXiv2022

Benchmarking emergency department triage prediction models with machine learning and large public electronic health records

The demand for emergency department (ED) services is increasing across the globe, particularly during the current COVID-19 pandemic. Clinical triage and risk assessment have become increasingly challenging due to the shortage of medical resources and the strain on hospital infrastructure caused by the pandemic. As a result of the widespread use of electronic health records (EHRs), we now have access to a vast amount of clinical data, which allows us to develop predictive models and decision support systems to address these challenges. To date, however, there are no widely accepted benchmark ED triage prediction models based on large-scale public EHR data. An open-source benchmarking platform would streamline research workflows by eliminating cumbersome data preprocessing, and facilitate comparisons among different studies and methodologies. In this paper, based on the Medical Information Mart for Intensive Care IV Emergency Department (MIMIC-IV-ED) database, we developed a publicly available benchmark suite for ED triage predictive models and created a benchmark dataset that contains over 400,000 ED visits from 2011 to 2019. We introduced three ED-based outcomes (hospitalization, critical outcomes, and 72-hour ED reattendance) and implemented a variety of popular methodologies, ranging from machine learning methods to clinical scoring systems. We evaluated and compared the performance of these methods against benchmark tasks. Our codes are open-source, allowing anyone with MIMIC-IV-ED data access to perform the same steps in data processing, benchmark model building, and experiments. This study provides future researchers with insights, suggestions, and protocols for managing raw data and developing risk triaging tools for emergency care.

cs.LG↗

arXiv2022

A novel interpretable machine learning system to generate clinical risk scores: An application for predicting early mortality or unplanned readmission in a retrospective cohort study

Risk scores are widely used for clinical decision making and commonly generated from logistic regression models. Machine-learning-based methods may work well for identifying important predictors, but such 'black box' variable selection limits interpretability, and variable importance evaluated from a single model can be biased. We propose a robust and interpretable variable selection approach using the recently developed Shapley variable importance cloud (ShapleyVIC) that accounts for variability across models. Our approach evaluates and visualizes overall variable contributions for in-depth inference and transparent variable selection, and filters out non-significant contributors to simplify model building steps. We derive an ensemble variable ranking from variable contributions, which is easily integrated with an automated and modularized risk score generator, AutoScore, for convenient implementation. In a study of early death or unplanned readmission, ShapleyVIC selected 6 of 41 candidate variables to create a well-performing model, which had similar performance to a 16-variable model from machine-learning-based ranking.

cs.LG↗

arXiv2021

Real Time Cluster Path Tracing

Photorealistic rendering effects are common in films, but most real time graphics today still rely on scan-line based multi-pass rendering to deliver rich visual experiences. While there have been prior works in distributed path tracing for static scene and objects under rigid motion, real time path tracing of deforming characters has to support per-frame dynamic BVH changes. We present the architecture and implementation of the first real-time production quality cluster path tracing renderer that supports film quality animation and deformation. We build our cluster path tracing system using the open source Blender and its GPU accelerated production quality renderer Cycles. Our system's rendering performance and quality scales linearly with the number of RTX cluster nodes used. It is able to generate and deliver path traced images with global illumination effects to remote light-weight client systems at 15-30 frames per second for a variety of Blender scenes including animated digital human characters with skin deformation and virtual objects.

cs.GR↗