arXiv subjects

Fengxu Yang

Publications and source records attributed to Fengxu Yang.

3 recordsLinked to original sources

arXiv2026

MLIP-MC: A Framework for Adsorption Simulations using Machine-Learned Interatomic Potentials

Grand canonical Monte Carlo (GCMC) simulations are essential for screening metal-organic frameworks (MOFs) for gas adsorption, yet their accuracy is limited by underlying interatomic potentials. Universal machine-learned interatomic potentials (MLIPs), trained on diverse chemical datasets, promise zero-shot prediction without system-specific training. We introduce MLIP-MC, an open-source Python framework to conduct GCMC simulations with MLIPs, and use this framework to benchmark a series of universal models, including MACE-MP-0, ORB-v3, and fairchem ODAC, for CO2 adsorption on ZIF-8, ZIF-4, and Mg-MOF-74. All universal models exhibit systematic biases, consistently over- or underestimating adsorption energetics. Crucially, accuracy depends on training data composition: only models trained on MOF-adsorbate interactions achieve reasonable agreement with a density functional theory derived reference. Errors grow linearly with CO2 uptake, reflecting compounding inaccuracies in adsorbate-adsorbate interactions. Our results demonstrate that current universal MLIPs require finetuning for quantitative adsorption predictions and demonstrate the power of MLIP-MC to rapidly test models.

cond-mat.mtrl-sci↗

arXiv2026

QUASAR: A Universal Autonomous System for Atomistic Simulation and a Benchmark of Its Capabilities

The integration of large language models (LLMs) into materials science offers a transformative opportunity to streamline computational workflows, yet current agentic systems remain constrained by rigid, carefully crafted domain-specific tool-calling paradigms and narrowly scoped agents. In this work, we introduce QUASAR, a universal autonomous system for atomistic simulation designed to facilitate production-grade scientific discovery. QUASAR autonomously orchestrates complex multi-scale workflows across diverse methods, including density functional theory, machine learning potentials, molecular dynamics, and Monte Carlo simulations. The system incorporates robust mechanisms for adaptive planning, context-efficient memory management, and hybrid knowledge retrieval to navigate real-world research scenarios without human intervention. We benchmark QUASAR against a series of three-tiered tasks, progressing from routine tasks to frontier research challenges such as photocatalyst screening and novel material assessment. These results suggest that QUASAR can function as a general atomistic reasoning system rather than a task-specific automation framework. They also provide initial evidence supporting the potential deployment of agentic AI as a component of computational chemistry research workflows, while identifying areas requiring further development.

cond-mat.mtrl-sci↗

arXiv2025

Large language models in materials science and the need for open-source approaches

Large language models (LLMs) are rapidly transforming materials science. This review examines recent LLM applications across the materials discovery pipeline, focusing on three key areas: mining scientific literature , predictive modelling, and multi-agent experimental systems. We highlight how LLMs extract valuable information such as synthesis conditions from text, learn structure-property relationships, and can coordinate agentic systems integrating computational tools and laboratory automation. While progress has been largely dependent on closed-source commercial models, our benchmark results demonstrate that open-source alternatives can match performance while offering greater transparency, reproducibility, cost-effectiveness, and data privacy. As open-source models continue to improve, we advocate their broader adoption to build accessible, flexible, and community-driven AI platforms for scientific discovery.

cs.CL↗