arXiv subjects

Florian Buettner

Publications and source records attributed to Florian Buettner.

At least 37 records · Page 2Linked to original sources

arXiv2025

MoRE-LLM: Mixture of Rule Experts Guided by a Large Language Model

To ensure the trustworthiness and interpretability of AI systems, it is essential to align machine learning models with human domain knowledge. This can be a challenging and time-consuming endeavor that requires close communication between data scientists and domain experts. Recent leaps in the capabilities of Large Language Models (LLMs) can help alleviate this burden. In this paper, we propose a Mixture of Rule Experts guided by a Large Language Model (MoRE-LLM) which combines a data-driven black-box model with knowledge extracted from an LLM to enable domain knowledge-aligned and transparent predictions. While the introduced Mixture of Rule Experts (MoRE) steers the discovery of local rule-based surrogates during training and their utilization for the classification task, the LLM is responsible for enhancing the domain knowledge alignment of the rules by correcting and contextualizing them. Importantly, our method does not rely on access to the LLM during test time and ensures interpretability while not being prone to LLM-based confabulations. We evaluate our method on several tabular data sets and compare its performance with interpretable and non-interpretable baselines. Besides performance, we evaluate our grey-box method with respect to the utilization of interpretable rules. In addition to our quantitative evaluation, we shed light on how the LLM can provide additional context to strengthen the comprehensibility and trustworthiness of the model's reasoning process.

cs.LG↗

arXiv2025

Grasping Partially Occluded Objects Using Autoencoder-Based Point Cloud Inpainting

Flexible industrial production systems will play a central role in the future of manufacturing due to higher product individualization and customization. A key component in such systems is the robotic grasping of known or unknown objects in random positions. Real-world applications often come with challenges that might not be considered in grasping solutions tested in simulation or lab settings. Partial occlusion of the target object is the most prominent. Examples of occlusion can be supporting structures in the camera's field of view, sensor imprecision, or parts occluding each other due to the production process. In all these cases, the resulting lack of information leads to shortcomings in calculating grasping points. In this paper, we present an algorithm to reconstruct the missing information. Our inpainting solution facilitates the real-world utilization of robust object matching approaches for grasping point calculation. We demonstrate the benefit of our solution by enabling an existing grasping system embedded in a real-world industrial application to handle occlusions in the input. With our solution, we drastically decrease the number of objects discarded by the process.

cs.RO↗

arXiv2025

Application-driven Validation of Posteriors in Inverse Problems

Current deep learning-based solutions for image analysis tasks are commonly incapable of handling problems to which multiple different plausible solutions exist. In response, posterior-based methods such as conditional Diffusion Models and Invertible Neural Networks have emerged; however, their translation is hampered by a lack of research on adequate validation. In other words, the way progress is measured often does not reflect the needs of the driving practical application. Closing this gap in the literature, we present the first systematic framework for the application-driven validation of posterior-based methods in inverse problems. As a methodological novelty, it adopts key principles from the field of object detection validation, which has a long history of addressing the question of how to locate and match multiple object instances in an image. Treating modes as instances enables us to perform mode-centric validation, using well-interpretable metrics from the application perspective. We demonstrate the value of our framework through instantiations for a synthetic toy example and two medical vision use cases: pose estimation in surgery and imaging-based quantification of functional tissue parameters for diagnostics. Our framework offers key advantages over common approaches to posterior validation in all three examples and could thus revolutionize performance assessment in inverse problems.

cs.CV↗

arXiv2024

Disentangling Mean Embeddings for Better Diagnostics of Image Generators

The evaluation of image generators remains a challenge due to the limitations of traditional metrics in providing nuanced insights into specific image regions. This is a critical problem as not all regions of an image may be learned with similar ease. In this work, we propose a novel approach to disentangle the cosine similarity of mean embeddings into the product of cosine similarities for individual pixel clusters via central kernel alignment. Consequently, we can quantify the contribution of the cluster-wise performance to the overall image generation performance. We demonstrate how this enhances the explainability and the likelihood of identifying pixel regions of model misbehavior across various real-world use cases.

cs.CV↗

arXiv2024

Explanatory Model Monitoring to Understand the Effects of Feature Shifts on Performance

Monitoring and maintaining machine learning models are among the most critical challenges in translating recent advances in the field into real-world applications. However, current monitoring methods lack the capability of provide actionable insights answering the question of why the performance of a particular model really degraded. In this work, we propose a novel approach to explain the behavior of a black-box model under feature shifts by attributing an estimated performance change to interpretable input characteristics. We refer to our method that combines concepts from Optimal Transport and Shapley Values as Explanatory Performance Estimation (XPE). We analyze the underlying assumptions and demonstrate the superiority of our approach over several baselines on different data sets across various data modalities such as images, audio, and tabular data. We also indicate how the generated results can lead to valuable insights, enabling explanatory model monitoring by revealing potential root causes for model deterioration and guiding toward actionable countermeasures.

cs.LG↗

arXiv2024

A Bias-Variance-Covariance Decomposition of Kernel Scores for Generative Models

Generative models, like large language models, are becoming increasingly relevant in our daily lives, yet a theoretical framework to assess their generalization behavior and uncertainty does not exist. Particularly, the problem of uncertainty estimation is commonly solved in an ad-hoc and task-dependent manner. For example, natural language approaches cannot be transferred to image generation. In this paper, we introduce the first bias-variance-covariance decomposition for kernel scores. This decomposition represents a theoretical framework from which we derive a kernel-based variance and entropy for uncertainty estimation. We propose unbiased and consistent estimators for each quantity which only require generated samples but not the underlying model itself. Based on the wide applicability of kernels, we demonstrate our framework via generalization and uncertainty experiments for image, audio, and language generation. Specifically, kernel entropy for uncertainty estimation is more predictive of performance on CoQA and TriviaQA question answering datasets than existing baselines and can also be applied to closed-source models.

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arXiv2024

Provably Better Explanations with Optimized Aggregation of Feature Attributions

Using feature attributions for post-hoc explanations is a common practice to understand and verify the predictions of opaque machine learning models. Despite the numerous techniques available, individual methods often produce inconsistent and unstable results, putting their overall reliability into question. In this work, we aim to systematically improve the quality of feature attributions by combining multiple explanations across distinct methods or their variations. For this purpose, we propose a novel approach to derive optimal convex combinations of feature attributions that yield provable improvements of desired quality criteria such as robustness or faithfulness to the model behavior. Through extensive experiments involving various model architectures and popular feature attribution techniques, we demonstrate that our combination strategy consistently outperforms individual methods and existing baselines.

cs.LG↗

arXiv2024

DomainLab: A modular Python package for domain generalization in deep learning

Poor generalization performance caused by distribution shifts in unseen domains often hinders the trustworthy deployment of deep neural networks. Many domain generalization techniques address this problem by adding a domain invariant regularization loss terms during training. However, there is a lack of modular software that allows users to combine the advantages of different methods with minimal effort for reproducibility. DomainLab is a modular Python package for training user specified neural networks with composable regularization loss terms. Its decoupled design allows the separation of neural networks from regularization loss construction. Hierarchical combinations of neural networks, different domain generalization methods, and associated hyperparameters, can all be specified together with other experimental setup in a single configuration file. Hierarchical combinations of neural networks, different domain generalization methods, and associated hyperparameters, can all be specified together with other experimental setup in a single configuration file. In addition, DomainLab offers powerful benchmarking functionality to evaluate the generalization performance of neural networks in out-of-distribution data. The package supports running the specified benchmark on an HPC cluster or on a standalone machine. The package is well tested with over 95 percent coverage and well documented. From the user perspective, it is closed to modification but open to extension. The package is under the MIT license, and its source code, tutorial and documentation can be found at https://github.com/marrlab/DomainLab.

cs.LG↗

arXiv2024

Better Uncertainty Calibration via Proper Scores for Classification and Beyond

With model trustworthiness being crucial for sensitive real-world applications, practitioners are putting more and more focus on improving the uncertainty calibration of deep neural networks. Calibration errors are designed to quantify the reliability of probabilistic predictions but their estimators are usually biased and inconsistent. In this work, we introduce the framework of proper calibration errors, which relates every calibration error to a proper score and provides a respective upper bound with optimal estimation properties. This relationship can be used to reliably quantify the model calibration improvement. We theoretically and empirically demonstrate the shortcomings of commonly used estimators compared to our approach. Due to the wide applicability of proper scores, this gives a natural extension of recalibration beyond classification.

cs.LG↗

arXiv2024

Understanding metric-related pitfalls in image analysis validation

Validation metrics are key for the reliable tracking of scientific progress and for bridging the current chasm between artificial intelligence (AI) research and its translation into practice. However, increasing evidence shows that particularly in image analysis, metrics are often chosen inadequately in relation to the underlying research problem. This could be attributed to a lack of accessibility of metric-related knowledge: While taking into account the individual strengths, weaknesses, and limitations of validation metrics is a critical prerequisite to making educated choices, the relevant knowledge is currently scattered and poorly accessible to individual researchers. Based on a multi-stage Delphi process conducted by a multidisciplinary expert consortium as well as extensive community feedback, the present work provides the first reliable and comprehensive common point of access to information on pitfalls related to validation metrics in image analysis. Focusing on biomedical image analysis but with the potential of transfer to other fields, the addressed pitfalls generalize across application domains and are categorized according to a newly created, domain-agnostic taxonomy. To facilitate comprehension, illustrations and specific examples accompany each pitfall. As a structured body of information accessible to researchers of all levels of expertise, this work enhances global comprehension of a key topic in image analysis validation.

cs.CV↗

arXiv2024

Metrics reloaded: Recommendations for image analysis validation

Increasing evidence shows that flaws in machine learning (ML) algorithm validation are an underestimated global problem. Particularly in automatic biomedical image analysis, chosen performance metrics often do not reflect the domain interest, thus failing to adequately measure scientific progress and hindering translation of ML techniques into practice. To overcome this, our large international expert consortium created Metrics Reloaded, a comprehensive framework guiding researchers in the problem-aware selection of metrics. Following the convergence of ML methodology across application domains, Metrics Reloaded fosters the convergence of validation methodology. The framework was developed in a multi-stage Delphi process and is based on the novel concept of a problem fingerprint - a structured representation of the given problem that captures all aspects that are relevant for metric selection, from the domain interest to the properties of the target structure(s), data set and algorithm output. Based on the problem fingerprint, users are guided through the process of choosing and applying appropriate validation metrics while being made aware of potential pitfalls. Metrics Reloaded targets image analysis problems that can be interpreted as a classification task at image, object or pixel level, namely image-level classification, object detection, semantic segmentation, and instance segmentation tasks. To improve the user experience, we implemented the framework in the Metrics Reloaded online tool, which also provides a point of access to explore weaknesses, strengths and specific recommendations for the most common validation metrics. The broad applicability of our framework across domains is demonstrated by an instantiation for various biological and medical image analysis use cases.

cs.CV↗

arXiv2023

Consistent and Asymptotically Unbiased Estimation of Proper Calibration Errors

Proper scoring rules evaluate the quality of probabilistic predictions, playing an essential role in the pursuit of accurate and well-calibrated models. Every proper score decomposes into two fundamental components -- proper calibration error and refinement -- utilizing a Bregman divergence. While uncertainty calibration has gained significant attention, current literature lacks a general estimator for these quantities with known statistical properties. To address this gap, we propose a method that allows consistent, and asymptotically unbiased estimation of all proper calibration errors and refinement terms. In particular, we introduce Kullback--Leibler calibration error, induced by the commonly used cross-entropy loss. As part of our results, we prove the relation between refinement and f-divergences, which implies information monotonicity in neural networks, regardless of which proper scoring rule is optimized. Our experiments validate empirically the claimed properties of the proposed estimator and suggest that the selection of a post-hoc calibration method should be determined by the particular calibration error of interest.

cs.LG↗

arXiv2023

Common Limitations of Image Processing Metrics: A Picture Story

While the importance of automatic image analysis is continuously increasing, recent meta-research revealed major flaws with respect to algorithm validation. Performance metrics are particularly key for meaningful, objective, and transparent performance assessment and validation of the used automatic algorithms, but relatively little attention has been given to the practical pitfalls when using specific metrics for a given image analysis task. These are typically related to (1) the disregard of inherent metric properties, such as the behaviour in the presence of class imbalance or small target structures, (2) the disregard of inherent data set properties, such as the non-independence of the test cases, and (3) the disregard of the actual biomedical domain interest that the metrics should reflect. This living dynamically document has the purpose to illustrate important limitations of performance metrics commonly applied in the field of image analysis. In this context, it focuses on biomedical image analysis problems that can be phrased as image-level classification, semantic segmentation, instance segmentation, or object detection task. The current version is based on a Delphi process on metrics conducted by an international consortium of image analysis experts from more than 60 institutions worldwide.

eess.IV↗

arXiv2023

Uncertainty Estimates of Predictions via a General Bias-Variance Decomposition

Reliably estimating the uncertainty of a prediction throughout the model lifecycle is crucial in many safety-critical applications. The most common way to measure this uncertainty is via the predicted confidence. While this tends to work well for in-domain samples, these estimates are unreliable under domain drift and restricted to classification. Alternatively, proper scores can be used for most predictive tasks but a bias-variance decomposition for model uncertainty does not exist in the current literature. In this work we introduce a general bias-variance decomposition for proper scores, giving rise to the Bregman Information as the variance term. We discover how exponential families and the classification log-likelihood are special cases and provide novel formulations. Surprisingly, we can express the classification case purely in the logit space. We showcase the practical relevance of this decomposition on several downstream tasks, including model ensembles and confidence regions. Further, we demonstrate how different approximations of the instance-level Bregman Information allow reliable out-of-distribution detection for all degrees of domain drift.

cs.LG↗

arXiv2023

Encoding Domain Knowledge in Multi-view Latent Variable Models: A Bayesian Approach with Structured Sparsity

Many real-world systems are described not only by data from a single source but via multiple data views. In genomic medicine, for instance, patients can be characterized by data from different molecular layers. Latent variable models with structured sparsity are a commonly used tool for disentangling variation within and across data views. However, their interpretability is cumbersome since it requires a direct inspection and interpretation of each factor from domain experts. Here, we propose MuVI, a novel multi-view latent variable model based on a modified horseshoe prior for modeling structured sparsity. This facilitates the incorporation of limited and noisy domain knowledge, thereby allowing for an analysis of multi-view data in an inherently explainable manner. We demonstrate that our model (i) outperforms state-of-the-art approaches for modeling structured sparsity in terms of the reconstruction error and the precision/recall, (ii) robustly integrates noisy domain expertise in the form of feature sets, (iii) promotes the identifiability of factors and (iv) infers interpretable and biologically meaningful axes of variation in a real-world multi-view dataset of cancer patients.

stat.ML↗

arXiv2022

Parameterized Temperature Scaling for Boosting the Expressive Power in Post-Hoc Uncertainty Calibration

We address the problem of uncertainty calibration and introduce a novel calibration method, Parametrized Temperature Scaling (PTS). Standard deep neural networks typically yield uncalibrated predictions, which can be transformed into calibrated confidence scores using post-hoc calibration methods. In this contribution, we demonstrate that the performance of accuracy-preserving state-of-the-art post-hoc calibrators is limited by their intrinsic expressive power. We generalize temperature scaling by computing prediction-specific temperatures, parameterized by a neural network. We show with extensive experiments that our novel accuracy-preserving approach consistently outperforms existing algorithms across a large number of model architectures, datasets and metrics.

cs.LG↗

arXiv2022

Encoding Domain Information with Sparse Priors for Inferring Explainable Latent Variables

Latent variable models are powerful statistical tools that can uncover relevant variation between patients or cells, by inferring unobserved hidden states from observable high-dimensional data. A major shortcoming of current methods, however, is their inability to learn sparse and interpretable hidden states. Additionally, in settings where partial knowledge on the latent structure of the data is readily available, a statistically sound integration of prior information into current methods is challenging. To address these issues, we propose spex-LVM, a factorial latent variable model with sparse priors to encourage the inference of explainable factors driven by domain-relevant information. spex-LVM utilizes existing knowledge of curated biomedical pathways to automatically assign annotated attributes to latent factors, yielding interpretable results tailored to the corresponding domain of interest. Evaluations on simulated and real single-cell RNA-seq datasets demonstrate that our model robustly identifies relevant structure in an inherently explainable manner, distinguishes technical noise from sources of biomedical variation, and provides dataset-specific adaptations of existing pathway annotations. Implementation is available at https://github.com/MLO-lab/spexlvm.

stat.ML↗

arXiv2021

Multi-output Gaussian Processes for Uncertainty-aware Recommender Systems

Recommender systems are often designed based on a collaborative filtering approach, where user preferences are predicted by modelling interactions between users and items. Many common approaches to solve the collaborative filtering task are based on learning representations of users and items, including simple matrix factorization, Gaussian process latent variable models, and neural-network based embeddings. While matrix factorization approaches fail to model nonlinear relations, neural networks can potentially capture such complex relations with unprecedented predictive power and are highly scalable. However, neither of them is able to model predictive uncertainties. In contrast, Gaussian Process based models can generate a predictive distribution, but cannot scale to large amounts of data. In this manuscript, we propose a novel approach combining the representation learning paradigm of collaborative filtering with multi-output Gaussian processes in a joint framework to generate uncertainty-aware recommendations. We introduce an efficient strategy for model training and inference, resulting in a model that scales to very large and sparse datasets and achieves competitive performance in terms of classical metrics quantifying the reconstruction error. In addition to accurately predicting user preferences, our model also provides meaningful uncertainty estimates about that prediction.

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