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François Thibault

Publications and source records attributed to François Thibault.

2 recordsLinked to original sources

On the reconstruction limits of complex networks

Network reconstruction consists in retrieving the hidden interaction structure of a system from observations. Many reconstruction algorithms have been proposed, although less research has been devoted to describe their theoretical limitations. In this work, we take a first-principles approach and build on our earlier definition of reconstructability-the fraction of structural information recoverable from data. We relate this quantity to the true data-generating (TDG) process and delineate an information-theoretic reconstruction limit, i.e., the upper bound of the mutual information between the true underlying graph and any graph reconstructed from observations. These concepts lead us to a principled numerical method to assess the validity of empirically reconstructed networks, based on model selection and a quantity we introduce: the reconstruction index. This index approximates the reconstructability from data, quantifies the variability of the reconstructed network ensemble, and is shown to predict reconstruction error without requiring knowledge of the true underlying network. We characterize this method and test it on empirical time series and networks.

stat.AP↗

On the Uniform Sampling of the Configuration Model with Centrality Constraints

The Onion Decomposition has recently been shown to provide principled models of complex graphs that better reproduce the sparse networks found in nature, but at the cost of complicated connection rules. We propose a k-edge swapping MCMC algorithm to efficiently obtain a uniform sample from the ensemble of simple graphs with a fixed Onion Decomposition and degree sequence. We prove the non-connectivity of the 2-edge swap algorithm for some small graphs, but then provide numerical experiments to show that this non-connectivity is not a problem for 2-edge swap in many practical cases, and likely irrelevant when using k-edge swaps with k>2. We finish by comparing our null model to other well-known models in the literature, and show that keeping constraints on the meso-scale structures of the Onion Decomposition greatly increases both the structural and functional realism of random graph null model.

cond-mat.stat-mech↗