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Fredrik Ohlsson

Publications and source records attributed to Fredrik Ohlsson.

18 recordsLinked to original sources

Steerable Neural ODEs on Homogeneous Spaces

We introduce steerable neural ordinary differential equations on homogeneous spaces $M=G/H$. These models constitute a novel geometric extension of manifold neural ordinary differential equations (NODEs) that transport associated feature vectors transforming under the local symmetry group $H$. We interpret features as sections of associated vector bundles over $M$, and describe their evolution as parallel transport. This results in a coupled system of ODEs consisting of a flow equation on $M$ and a steering equation acting on features. We show that steerable NODEs are $G$-equivariant whenever the vector field generating the flow and the connection governing parallel transport are both $G$-invariant. Furthermore, we demonstrate how steerable NODEs incorporate existing NODE models and continuous normalizing flows on Lie groups. Our framework provides the geometric foundation for learning continuous-time equivariant dynamics of general vector-valued features on homogeneous spaces.

cs.LG

Framing structural identifiability in terms of parameter symmetries

A key step in mechanistic modelling of dynamical systems is to conduct a structural identifiability analysis. This entails deducing which parameter combinations can be estimated from a given set of observed outputs. The standard differential algebra approach answers this question by re-writing the model as a higher-order system of ordinary differential equations that depends solely on the observed outputs. Over the last decades, alternative approaches for analysing structural identifiability based on Lie symmetries acting on independent and dependent variables as well as parameters, have been proposed. However, the link between the standard differential algebra approach and that using full symmetries remains elusive. In this work, we establish this link by introducing the notion of parameter symmetries, which are a special type of full symmetry that alter parameters while preserving the observed outputs. Our main result states that a parameter combination is locally structurally identifiable if and only if it is a differential invariant of all parameter symmetries of a given model. We show that the standard differential algebra approach is consistent with the concept of structural identifiability in terms of parameter symmetries. We present an alternative symmetry-based approach for analysing structural identifiability using parameter symmetries. Lastly, we demonstrate our approach on two well-known models in mathematical biology.

math.OC

Framing local structural identifiability and observability in terms of parameter-state symmetries

We introduce a subclass of Lie symmetries, called parameter-state symmetries, to analyse the local structural identifiability and observability of mechanistic models consisting of state-dependent ODEs with observed outputs. These symmetries act on parameters and states while preserving observed outputs at every time point. We prove that locally structurally identifiable parameter combinations and locally structurally observable states correspond to universal invariants of all parameter-state symmetries of a given model. We illustrate the framework on four previously studied mechanistic models, confirming known identifiability results and revealing novel insights into which states are observable, providing a unified symmetry-based approach for analysing structural properties of dynamical systems.

math.DS

PolyNODE: Variable-dimension Neural ODEs on M-polyfolds

Neural ordinary differential equations (NODEs) are geometric deep learning models based on dynamical systems and flows generated by vector fields on manifolds. Despite numerous successful applications, particularly within the flow matching paradigm, all existing NODE models are fundamentally constrained to fixed-dimensional dynamics by the intrinsic nature of the manifold's dimension. In this paper, we extend NODEs to M-polyfolds (spaces that can simultaneously accommodate varying dimensions and a notion of differentiability) and introduce PolyNODEs, the first variable-dimensional flow-based model in geometric deep learning. As an example application, we construct explicit M-polyfolds featuring dimensional bottlenecks and PolyNODE autoencoders based on parametrised vector fields that traverse these bottlenecks. We demonstrate experimentally that our PolyNODE models can be trained to solve reconstruction tasks in these spaces, and that latent representations of the input can be extracted and used to solve downstream classification tasks. The code used in our experiments is publicly available at https://github.com/turbotage/PolyNODE .

cs.LG

Optimization Dynamics of Equivariant and Augmented Neural Networks

We investigate the optimization of neural networks on symmetric data, and compare the strategy of constraining the architecture to be equivariant to that of using data augmentation. Our analysis reveals that that the relative geometry of the admissible and the equivariant layers, respectively, plays a key role. Under natural assumptions on the data, network, loss, and group of symmetries, we show that compatibility of the spaces of admissible layers and equivariant layers, in the sense that the corresponding orthogonal projections commute, implies that the sets of equivariant stationary points are identical for the two strategies. If the linear layers of the network also are given a unitary parametrization, the set of equivariant layers is even invariant under the gradient flow for augmented models. Our analysis however also reveals that even in the latter situation, stationary points may be unstable for augmented training although they are stable for the manifestly equivariant models.

cs.LG

Equivariant Manifold Neural ODEs and Differential Invariants

In this paper, we develop a manifestly geometric framework for equivariant manifold neural ordinary differential equations (NODEs) and use it to analyse their modelling capabilities for symmetric data. First, we consider the action of a Lie group $G$ on a smooth manifold $M$ and establish the equivalence between equivariance of vector fields, symmetries of the corresponding Cauchy problems, and equivariance of the associated NODEs. We also propose a novel formulation, based on Lie theory for symmetries of differential equations, of the equivariant manifold NODEs in terms of the differential invariants of the action of $G$ on $M$, which provides an efficient parameterisation of the space of equivariant vector fields in a way that is agnostic to both the manifold $M$ and the symmetry group $G$. Second, we construct augmented manifold NODEs, through embeddings into flows on the tangent bundle $TM$, and show that they are universal approximators of diffeomorphisms on any connected $M$. Furthermore, we show that universality persists in the equivariant case and that the augmented equivariant manifold NODEs can be incorporated into the geometric framework using higher-order differential invariants. Finally, we consider the induced action of $G$ on different fields on $M$ and show how it can be used to generalise previous work, on, e.g., continuous normalizing flows, to equivariant models in any geometry.

cs.LG

HEAL-SWIN: A Vision Transformer On The Sphere

High-resolution wide-angle fisheye images are becoming more and more important for robotics applications such as autonomous driving. However, using ordinary convolutional neural networks or vision transformers on this data is problematic due to projection and distortion losses introduced when projecting to a rectangular grid on the plane. We introduce the HEAL-SWIN transformer, which combines the highly uniform Hierarchical Equal Area iso-Latitude Pixelation (HEALPix) grid used in astrophysics and cosmology with the Hierarchical Shifted-Window (SWIN) transformer to yield an efficient and flexible model capable of training on high-resolution, distortion-free spherical data. In HEAL-SWIN, the nested structure of the HEALPix grid is used to perform the patching and windowing operations of the SWIN transformer, enabling the network to process spherical representations with minimal computational overhead. We demonstrate the superior performance of our model on both synthetic and real automotive datasets, as well as a selection of other image datasets, for semantic segmentation, depth regression and classification tasks. Our code is publicly available at https://github.com/JanEGerken/HEAL-SWIN.

cs.CV

Construction of integrable generalised travelling wave models and analytical solutions using Lie symmetries

Certain solutions of autonomous PDEs without any boundary conditions describing the spatiotemporal evolution of a dependent variable in an unbounded spatial domain can be characterised as a travelling wave moving with constant speed. In the simplest case, such PDEs can be reduced to a single autonomous second order ODE with one dependent variable. For certain parameter values it has been shown using perturbations methods in combination with ansätze that numerous such second order ODEs have analytical travelling wave solutions described by a simple sigmoid function. However, this methodology provides no leverage on the problem of finding a generalised class of models possessing such analytical travelling wave solutions. The most efficient methods for both finding analytical solutions and constructing classes of ODEs are based on Lie symmetries which are transformations known as one parameter $\mathcal{C}^{\infty}$ diffeomorphisms mapping solutions to other solutions. Recently, analytical solutions of a second order ODE encapsulating numerous oscillatory models as well as some of the previously mentioned travelling wave models with simple analytical solutions have been found by means of a two dimensional Lie algebra. Based on this Lie algebra, we construct the most general class of integrable autonomous second order ODEs for which these symmetries are manifest. Moreover, we show that a sub-class of second order ODEs has simple analytical travelling wave solutions described by a sigmoid function. Lastly, we characterise the action of the two symmetries in this Lie algebra on these simple analytical travelling wave solutions and we relate our sub-class of ODEs to previously known integrable travelling wave models.

nlin.SI

Energy translation symmetries and dynamics of separable autonomous two-dimensional ODEs

We study symmetries in the phase plane for separable, autonomous two-state systems of ordinary differential equations (ODEs). We prove two main theoretical results concerning the existence and non-triviality of two orthogonal symmetries for such systems. In particular, we show that these symmetries correspond to translations in the internal energy of the system, and describe their action on solution trajectories in the phase plane. In addition, we apply recent results establishing how phase plane symmetries can be extended to incorporate temporal dynamics to these energy translation symmetries. Subsequently, we apply our theoretical results to the analysis of three models from the field of mathematical biology: a canonical biological oscillator model, the Lotka--Volterra (LV) model describing predator-prey dynamics, and the SIR model describing the spread of a disease in a population. We describe the energy translation symmetries in detail, including their action on biological observables of the models, derive analytic expressions for the extensions to the time domain, and discuss their action on solution trajectories.

physics.bio-ph

On the correspondence between symmetries of two-dimensional autonomous dynamical systems and their phase plane realisations

We consider the relationship between symmetries of two-dimensional autonomous dynamical system in two common formulations; as a set of differential equations for the derivative of each state with respect to time, and a single differential equation in the phase plane representing the dynamics restricted to the state space of the system. Both representations can be analysed with respect to the symmetries of their governing differential equations, and we establish the correspondence between the set of infinitesimal generators of the respective formulations. Our main result is to show that every generator of a symmetry of the autonomous system induces a well-defined vector field generating a symmetry in the phase plane and, conversely, that every symmetry generator in the phase plane can be lifted to a generator of a symmetry of the original autonomous system, which is unique up to constant translations in time. The process of lifting requires the solution of a linear partial differential equation, which we refer to as the lifting condition. We discuss in detail the solution of this equation in general, and exemplify the lift of symmetries in two commonly occurring examples; a mass conserved linear model and a non-linear oscillator model.

math.DS

Equivariance versus Augmentation for Spherical Images

We analyze the role of rotational equivariance in convolutional neural networks (CNNs) applied to spherical images. We compare the performance of the group equivariant networks known as S2CNNs and standard non-equivariant CNNs trained with an increasing amount of data augmentation. The chosen architectures can be considered baseline references for the respective design paradigms. Our models are trained and evaluated on single or multiple items from the MNIST or FashionMNIST dataset projected onto the sphere. For the task of image classification, which is inherently rotationally invariant, we find that by considerably increasing the amount of data augmentation and the size of the networks, it is possible for the standard CNNs to reach at least the same performance as the equivariant network. In contrast, for the inherently equivariant task of semantic segmentation, the non-equivariant networks are consistently outperformed by the equivariant networks with significantly fewer parameters. We also analyze and compare the inference latency and training times of the different networks, enabling detailed tradeoff considerations between equivariant architectures and data augmentation for practical problems. The equivariant spherical networks used in the experiments are available at https://github.com/JanEGerken/sem_seg_s2cnn .

cs.LG

Symmetries of systems of first order ODEs: Symbolic symmetry computations, mechanistic model construction and applications in biology

We discuss the role and merits of symmetry methods for the analysis of biological systems. In particular, we consider systems of first order ordinary differential equations and provide a comprehensive review of the geometrical foundations pertinent to symmetries of such systems. Subsequently, we present an algorithm for finding infinitesimal generators of symmetries for systems with rational reaction terms, and an open-source implementation of the algorithm using symbolic computations. We discuss two complementary perspectives on symmetries in mechanistic modelling; as tools for the analysis of a given model or as a geometrical principle for incorporating biological properties in the construction of new models. Through numerous examples of relevance to modelling in biology we demonstrate the different uses of symmetry methods, and also discuss how to infer symmetries from experimental data.

q-bio.QM

Geometric Deep Learning and Equivariant Neural Networks

We survey the mathematical foundations of geometric deep learning, focusing on group equivariant and gauge equivariant neural networks. We develop gauge equivariant convolutional neural networks on arbitrary manifolds $\mathcal{M}$ using principal bundles with structure group $K$ and equivariant maps between sections of associated vector bundles. We also discuss group equivariant neural networks for homogeneous spaces $\mathcal{M}=G/K$, which are instead equivariant with respect to the global symmetry $G$ on $\mathcal{M}$. Group equivariant layers can be interpreted as intertwiners between induced representations of $G$, and we show their relation to gauge equivariant convolutional layers. We analyze several applications of this formalism, including semantic segmentation and object detection networks. We also discuss the case of spherical networks in great detail, corresponding to the case $\mathcal{M}=S^2=\mathrm{SO}(3)/\mathrm{SO}(2)$. Here we emphasize the use of Fourier analysis involving Wigner matrices, spherical harmonics and Clebsch-Gordan coefficients for $G=\mathrm{SO}(3)$, illustrating the power of representation theory for deep learning.

cs.LG

(2,0) theory on Taub-NUT: A note on WZW models on singular fibrations

In this note we consider the gauge field equation of motion for the dimensional reduction of the (2,0) tensor multiplet on singular circle fibrations. The fibrations are characterized by the corresponding U(1) action having a codimension four fixed point locus W. Along W, the dimensional reduction of the (2,0) receives a modification described by a WZW model. We consider the emergence of the additional degrees of freedom through the topological term in the action, which in addition to the gauge field strength involves the U(1) connection of the space-time fibration. We also consider the Taub-NUT space as a simple example of a singular fibration, and in particular consider spherically symmetric solutions for the field strength.

hep-th

(2,0) theory on circle fibrations

We consider (2,0) theory on a manifold M_6 that is a fibration of a spatial S^1 over some five-dimensional base manifold M_5. Initially, we study the free (2,0) tensor multiplet which can be described in terms of classical equations of motion in six dimensions. Given a metric on M_6 the low energy effective theory obtained through dimensional reduction on the circle is a Maxwell theory on M_5. The parameters describing the local geometry of the fibration are interpreted respectively as the metric on M_5, a non-dynamical U(1) gauge field and the coupling strength of the resulting low energy Maxwell theory. We derive the general form of the action of the Maxwell theory by integrating the reduced equations of motion, and consider the symmetries of this theory originating from the superconformal symmetry in six dimensions. Subsequently, we consider a non-abelian generalization of the Maxwell theory on M_5. Completing the theory with Yukawa and phi^4 terms, and suitably modifying the supersymmetry transformations, we obtain a supersymmetric Yang-Mills theory which includes terms related to the geometry of the fibration.

hep-th

BPS partition functions in N = 4 Yang-Mills theory on T^4

We consider N = 4 Yang-Mills theory on a flat four-torus with the R-symmetry current coupled to a flat background connection. The partition function depends on the coupling constant of the theory, but when it is expanded in a power series in the R-symmetry connection around the loci at which one of the supersymmetries is unbroken, the constant and linear terms are in fact independent of the coupling constant and can be computed at weak coupling for all non-trivial 't Hooft fluxes. The case of a trivial 't Hooft flux is difficult because of infrared problems, but the corresponding terms in the partition function are uniquely determined by S-duality.

hep-th

Finite energy shifts in SU(n) supersymmetric Yang-Mills theory on T^3xR at weak coupling

We consider a semi-classical treatment, in the regime of weak gauge coupling, of supersymmetric Yang-Mills theory in a space-time of the form T^3xR with SU(n)/Z_n gauge group and a non-trivial gauge bundle. More specifically, we consider the theories obtained as power series expansions around a certain class of normalizable vacua of the classical theory, corresponding to isolated points in the moduli space of flat connections, and the perturbative corrections to the free energy eigenstates and eigenvalues in the weakly interacting theory. The perturbation theory construction of the interacting Hilbert space is complicated by the divergence of the norm of the interacting states. Consequently, the free and interacting Hilbert furnish unitarily inequivalent representation of the algebra of creation and annihilation operators of the quantum theory. We discuss a consistent redefinition of the Hilbert space norm to obtain the interacting Hilbert space and the properties of the interacting representation. In particular, we consider the lowest non-vanishing corrections to the free energy spectrum and discuss the crucial importance of supersymmetry for these corrections to be finite.

hep-th

The Weak Coupling Spectrum around Isolated Vacua in N=4 Super Yang-Mills on T^3 with any Gauge Group

The moduli space of flat connections for maximally supersymmetric Yang-Mills theories, in a space-time of the form T^3xR, contains isolated points, corresponding to normalizable zero energy states, for certain simple gauge groups G. We consider the low energy effective field theories in the weak coupling limit supported on such isolated points and find that when quantized they consist of an infinite set of harmonic oscillators whose angular frequencies are completely determined by the Lie algebra of G. We then proceed to find the isolated flat connections for all simple G and subsequently specify the corresponding effective field theories.

hep-th