arXiv subjects

Gabriele Pergola

Publications and source records attributed to Gabriele Pergola.

30 records · Page 2Linked to original sources

arXiv2023

NapSS: Paragraph-level Medical Text Simplification via Narrative Prompting and Sentence-matching Summarization

Accessing medical literature is difficult for laypeople as the content is written for specialists and contains medical jargon. Automated text simplification methods offer a potential means to address this issue. In this work, we propose a summarize-then-simplify two-stage strategy, which we call NapSS, identifying the relevant content to simplify while ensuring that the original narrative flow is preserved. In this approach, we first generate reference summaries via sentence matching between the original and the simplified abstracts. These summaries are then used to train an extractive summarizer, learning the most relevant content to be simplified. Then, to ensure the narrative consistency of the simplified text, we synthesize auxiliary narrative prompts combining key phrases derived from the syntactical analyses of the original text. Our model achieves results significantly better than the seq2seq baseline on an English medical corpus, yielding 3%~4% absolute improvements in terms of lexical similarity, and providing a further 1.1% improvement of SARI score when combined with the baseline. We also highlight shortcomings of existing evaluation methods, and introduce new metrics that take into account both lexical and high-level semantic similarity. A human evaluation conducted on a random sample of the test set further establishes the effectiveness of the proposed approach. Codes and models are released here: https://github.com/LuJunru/NapSS.

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arXiv2023

Event Temporal Relation Extraction with Bayesian Translational Model

Existing models to extract temporal relations between events lack a principled method to incorporate external knowledge. In this study, we introduce Bayesian-Trans, a Bayesian learning-based method that models the temporal relation representations as latent variables and infers their values via Bayesian inference and translational functions. Compared to conventional neural approaches, instead of performing point estimation to find the best set parameters, the proposed model infers the parameters' posterior distribution directly, enhancing the model's capability to encode and express uncertainty about the predictions. Experimental results on the three widely used datasets show that Bayesian-Trans outperforms existing approaches for event temporal relation extraction. We additionally present detailed analyses on uncertainty quantification, comparison of priors, and ablation studies, illustrating the benefits of the proposed approach.

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arXiv2022

Event-Centric Question Answering via Contrastive Learning and Invertible Event Transformation

Human reading comprehension often requires reasoning of event semantic relations in narratives, represented by Event-centric Question-Answering (QA). To address event-centric QA, we propose a novel QA model with contrastive learning and invertible event transformation, call TranCLR. Our proposed model utilizes an invertible transformation matrix to project semantic vectors of events into a common event embedding space, trained with contrastive learning, and thus naturally inject event semantic knowledge into mainstream QA pipelines. The transformation matrix is fine-tuned with the annotated event relation types between events that occurred in questions and those in answers, using event-aware question vectors. Experimental results on the Event Semantic Relation Reasoning (ESTER) dataset show significant improvements in both generative and extractive settings compared to the existing strong baselines, achieving over 8.4% gain in the token-level F1 score and 3.0% gain in Exact Match (EM) score under the multi-answer setting. Qualitative analysis reveals the high quality of the generated answers by TranCLR, demonstrating the feasibility of injecting event knowledge into QA model learning. Our code and models can be found at https://github.com/LuJunru/TranCLR.

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arXiv2022

PHEE: A Dataset for Pharmacovigilance Event Extraction from Text

The primary goal of drug safety researchers and regulators is to promptly identify adverse drug reactions. Doing so may in turn prevent or reduce the harm to patients and ultimately improve public health. Evaluating and monitoring drug safety (i.e., pharmacovigilance) involves analyzing an ever growing collection of spontaneous reports from health professionals, physicians, and pharmacists, and information voluntarily submitted by patients. In this scenario, facilitating analysis of such reports via automation has the potential to rapidly identify safety signals. Unfortunately, public resources for developing natural language models for this task are scant. We present PHEE, a novel dataset for pharmacovigilance comprising over 5000 annotated events from medical case reports and biomedical literature, making it the largest such public dataset to date. We describe the hierarchical event schema designed to provide coarse and fine-grained information about patients' demographics, treatments and (side) effects. Along with the discussion of the dataset, we present a thorough experimental evaluation of current state-of-the-art approaches for biomedical event extraction, point out their limitations, and highlight open challenges to foster future research in this area.

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arXiv2022

Disentangled Learning of Stance and Aspect Topics for Vaccine Attitude Detection in Social Media

Building models to detect vaccine attitudes on social media is challenging because of the composite, often intricate aspects involved, and the limited availability of annotated data. Existing approaches have relied heavily on supervised training that requires abundant annotations and pre-defined aspect categories. Instead, with the aim of leveraging the large amount of unannotated data now available on vaccination, we propose a novel semi-supervised approach for vaccine attitude detection, called VADet. A variational autoencoding architecture based on language models is employed to learn from unlabelled data the topical information of the domain. Then, the model is fine-tuned with a few manually annotated examples of user attitudes. We validate the effectiveness of VADet on our annotated data and also on an existing vaccination corpus annotated with opinions on vaccines. Our results show that VADet is able to learn disentangled stance and aspect topics, and outperforms existing aspect-based sentiment analysis models on both stance detection and tweet clustering.

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arXiv2021

A Disentangled Adversarial Neural Topic Model for Separating Opinions from Plots in User Reviews

The flexibility of the inference process in Variational Autoencoders (VAEs) has recently led to revising traditional probabilistic topic models giving rise to Neural Topic Models (NTMs). Although these approaches have achieved significant results, surprisingly very little work has been done on how to disentangle the latent topics. Existing topic models when applied to reviews may extract topics associated with writers' subjective opinions mixed with those related to factual descriptions such as plot summaries in movie and book reviews. It is thus desirable to automatically separate opinion topics from plot/neutral ones enabling a better interpretability. In this paper, we propose a neural topic model combined with adversarial training to disentangle opinion topics from plot and neutral ones. We conduct an extensive experimental assessment introducing a new collection of movie and book reviews paired with their plots, namely MOBO dataset, showing an improved coherence and variety of topics, a consistent disentanglement rate, and sentiment classification performance superior to other supervised topic models.

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arXiv2021

Topic-Driven and Knowledge-Aware Transformer for Dialogue Emotion Detection

Emotion detection in dialogues is challenging as it often requires the identification of thematic topics underlying a conversation, the relevant commonsense knowledge, and the intricate transition patterns between the affective states. In this paper, we propose a Topic-Driven Knowledge-Aware Transformer to handle the challenges above. We firstly design a topic-augmented language model (LM) with an additional layer specialized for topic detection. The topic-augmented LM is then combined with commonsense statements derived from a knowledge base based on the dialogue contextual information. Finally, a transformer-based encoder-decoder architecture fuses the topical and commonsense information, and performs the emotion label sequence prediction. The model has been experimented on four datasets in dialogue emotion detection, demonstrating its superiority empirically over the existing state-of-the-art approaches. Quantitative and qualitative results show that the model can discover topics which help in distinguishing emotion categories.

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arXiv2021

Boosting Low-Resource Biomedical QA via Entity-Aware Masking Strategies

Biomedical question-answering (QA) has gained increased attention for its capability to provide users with high-quality information from a vast scientific literature. Although an increasing number of biomedical QA datasets has been recently made available, those resources are still rather limited and expensive to produce. Transfer learning via pre-trained language models (LMs) has been shown as a promising approach to leverage existing general-purpose knowledge. However, finetuning these large models can be costly and time consuming, often yielding limited benefits when adapting to specific themes of specialised domains, such as the COVID-19 literature. To bootstrap further their domain adaptation, we propose a simple yet unexplored approach, which we call biomedical entity-aware masking (BEM). We encourage masked language models to learn entity-centric knowledge based on the pivotal entities characterizing the domain at hand, and employ those entities to drive the LM fine-tuning. The resulting strategy is a downstream process applicable to a wide variety of masked LMs, not requiring additional memory or components in the neural architectures. Experimental results show performance on par with state-of-the-art models on several biomedical QA datasets.

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arXiv2021

Adversarial Learning of Poisson Factorisation Model for Gauging Brand Sentiment in User Reviews

In this paper, we propose the Brand-Topic Model (BTM) which aims to detect brand-associated polarity-bearing topics from product reviews. Different from existing models for sentiment-topic extraction which assume topics are grouped under discrete sentiment categories such as `positive', `negative' and `neural', BTM is able to automatically infer real-valued brand-associated sentiment scores and generate fine-grained sentiment-topics in which we can observe continuous changes of words under a certain topic (e.g., `shaver' or `cream') while its associated sentiment gradually varies from negative to positive. BTM is built on the Poisson factorisation model with the incorporation of adversarial learning. It has been evaluated on a dataset constructed from Amazon reviews. Experimental results show that BTM outperforms a number of competitive baselines in brand ranking, achieving a better balance of topic coherence and uniqueness, and extracting better-separated polarity-bearing topics.

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arXiv2020

CHIME: Cross-passage Hierarchical Memory Network for Generative Review Question Answering

We introduce CHIME, a cross-passage hierarchical memory network for question answering (QA) via text generation. It extends XLNet introducing an auxiliary memory module consisting of two components: the context memory collecting cross-passage evidences, and the answer memory working as a buffer continually refining the generated answers. Empirically, we show the efficacy of the proposed architecture in the multi-passage generative QA, outperforming the state-of-the-art baselines with better syntactically well-formed answers and increased precision in addressing the questions of the AmazonQA review dataset. An additional qualitative analysis revealed the interpretability introduced by the memory module.

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arXiv2019

Topical Phrase Extraction from Clinical Reports by Incorporating both Local and Global Context

Making sense of words often requires to simultaneously examine the surrounding context of a term as well as the global themes characterizing the overall corpus. Several topic models have already exploited word embeddings to recognize local context, however, it has been weakly combined with the global context during the topic inference. This paper proposes to extract topical phrases corroborating the word embedding information with the global context detected by Latent Semantic Analysis, and then combine them by means of the Pólya urn model. To highlight the effectiveness of this combined approach the model was assessed analyzing clinical reports, a challenging scenario characterized by technical jargon and a limited word statistics available. Results show it outperforms the state-of-the-art approaches in terms of both topic coherence and computational cost.

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arXiv2019

TDAM: a Topic-Dependent Attention Model for Sentiment Analysis

We propose a topic-dependent attention model for sentiment classification and topic extraction. Our model assumes that a global topic embedding is shared across documents and employs an attention mechanism to derive local topic embedding for words and sentences. These are subsequently incorporated in a modified Gated Recurrent Unit (GRU) for sentiment classification and extraction of topics bearing different sentiment polarities. Those topics emerge from the words' local topic embeddings learned by the internal attention of the GRU cells in the context of a multi-task learning framework. In this paper, we present the hierarchical architecture, the new GRU unit and the experiments conducted on users' reviews which demonstrate classification performance on a par with the state-of-the-art methodologies for sentiment classification and topic coherence outperforming the current approaches for supervised topic extraction. In addition, our model is able to extract coherent aspect-sentiment clusters despite using no aspect-level annotations for training.

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