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Gautam Sabnis

Publications and source records attributed to Gautam Sabnis.

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Bayesian variable selection in linear regression models with instrumental variables

Many papers on high-dimensional statistics have proposed methods for variable selection and inference in linear regression models by relying explicitly or implicitly on the assumption that all regressors are exogenous. However, applications abound where endogeneity arises from selection biases, omitted variables, measurement errors, unmeasured confounding and many other challenges common to data collection Fan et al. (2014). The most common cure to endogeneity issues consists in resorting to instrumental variable (IV) inference. The objective of this paper is to present a Bayesian approach to tackling endogeneity in high-dimensional linear IV models. Using a working quasi-likelihood combined with an appropriate sparsity inducing spike-and-slab prior distribution, we develop a semi-parametric method for variable selection in high-dimensional linear models with endogeneous regressors within a quasi-Bayesian framework. We derive some conditions under which the quasi-posterior distribution is well defined and puts most of its probability mass around the true value of the parameter as $p \rightarrow \infty$. We demonstrate through empirical work the fine performance of the proposed approach relative to some other alternatives. We also include include an empirical application that assesses the return on education by revisiting the work of Angrist and Keueger (1991).

stat.ME

Compressed Covariance Estimation With Automated Dimension Learning

We propose a method for estimating a covariance matrix that can be represented as a sum of a low-rank matrix and a diagonal matrix. The proposed method compresses high-dimensional data, computes the sample covariance in the compressed space, and lifts it back to the ambient space via a decompression operation. A salient feature of our approach relative to existing literature on combining sparsity and low-rank structures in covariance matrix estimation is that we do not require the low-rank component to be sparse. A principled framework for estimating the compressed dimension using Stein's Unbiased Risk Estimation theory is demonstrated. Experimental simulation results demonstrate the efficacy and scalability of our proposed approach.

stat.ME

A Divide and Conquer Strategy for High Dimensional Bayesian Factor Models

We propose a distributed computing framework, based on a divide and conquer strategy and hierarchical modeling, to accelerate posterior inference for high-dimensional Bayesian factor models. Our approach distributes the task of high-dimensional covariance matrix estimation to multiple cores, solves each subproblem separately via a latent factor model, and then combines these estimates to produce a global estimate of the covariance matrix. Existing divide and conquer methods focus exclusively on dividing the total number of observations $n$ into subsamples while keeping the dimension $p$ fixed. Our approach is novel in this regard: it includes all of the $n$ samples in each subproblem and, instead, splits the dimension $p$ into smaller subsets for each subproblem. The subproblems themselves can be challenging to solve when $p$ is large due to the dependencies across dimensions. To circumvent this issue, we specify a novel hierarchical structure on the latent factors that allows for flexible dependencies across dimensions, while still maintaining computational efficiency. Our approach is readily parallelizable and is shown to have computational efficiency of several orders of magnitude in comparison to fitting a full factor model. We report the performance of our method in synthetic examples and a genomics application.

stat.ME