arXiv subjects

George Em Karniadakis

Publications and source records attributed to George Em Karniadakis.

258 records · Page 15Linked to original sources

arXiv2016

Petrov-Galerkin and Spectral Collocation Methods for distributed Order Differential Equations

Distributed order fractional operators offer a rigorous tool for mathematical modelling of multi-physics phenomena, where the differential orders are distributed over a range of values rather than being just a fixed integer/fraction as it is in standard/fractional ODEs/PDEs. We develop two spectrally-accurate schemes, namely a Petrov-Galerkin spectral method and a spectral collocation method for distributed order fractional differential equations. These schemes are developed based on the fractional Sturm-Liouville eigen-problems (FSLPs). In the Petrov-Galerkin method, we employ fractional (non-polynomial) basis functions, called \textit{Jacobi poly-fractonomials}, which are the eigenfunctions of the FSLP of first kind, while, we employ another space of test functions as the span of poly-fractonomial eigenfunctions of the FSLP of second kind. We define the underlying \textit{distributed Sobolev space} and the associated norms, where we carry out the corresponding discrete stability and error analyses of the proposed scheme. In the collocation scheme, we employ fractional (non-polynomial) Lagrange interpolants satisfying the Kronecker delta property at the collocation points. Subsequently, we obtain the corresponding distributed differentiation matrices to be employed in the discretization of the strong problem. We perform systematic numerical tests to demonstrate the efficiency and conditioning of each method.

math.NA↗

arXiv2015

Mesoscale modeling of phase transition dynamics of thermoresponsive polymers

We present a non-isothermal mesoscopic model for investigation of the phase transition dynamics of thermoresponsive polymers. Since this model conserves energy in the simulations, it is able to correctly capture not only the transient behavior of polymer precipitation from solvent, but also the energy variation associated with the phase transition process. Simulations provide dynamic details of the thermally induced phase transition and confirm two different mechanisms dominating the phase transition dynamics. A shift of endothermic peak with concentration is observed and the underlying mechanism is explored.

physics.chem-ph↗

arXiv2014

Enabling High-Dimensional Hierarchical Uncertainty Quantification by ANOVA and Tensor-Train Decomposition

Hierarchical uncertainty quantification can reduce the computational cost of stochastic circuit simulation by employing spectral methods at different levels. This paper presents an efficient framework to simulate hierarchically some challenging stochastic circuits/systems that include high-dimensional subsystems. Due to the high parameter dimensionality, it is challenging to both extract surrogate models at the low level of the design hierarchy and to handle them in the high-level simulation. In this paper, we develop an efficient ANOVA-based stochastic circuit/MEMS simulator to extract efficiently the surrogate models at the low level. In order to avoid the curse of dimensionality, we employ tensor-train decomposition at the high level to construct the basis functions and Gauss quadrature points. As a demonstration, we verify our algorithm on a stochastic oscillator with four MEMS capacitors and 184 random parameters. This challenging example is simulated efficiently by our simulator at the cost of only 10 minutes in MATLAB on a regular personal computer.

cs.CE↗

arXiv2014

Stochastic Testing Simulator for Integrated Circuits and MEMS: Hierarchical and Sparse Techniques

Process variations are a major concern in today's chip design since they can significantly degrade chip performance. To predict such degradation, existing circuit and MEMS simulators rely on Monte Carlo algorithms, which are typically too slow. Therefore, novel fast stochastic simulators are highly desired. This paper first reviews our recently developed stochastic testing simulator that can achieve speedup factors of hundreds to thousands over Monte Carlo. Then, we develop a fast hierarchical stochastic spectral simulator to simulate a complex circuit or system consisting of several blocks. We further present a fast simulation approach based on anchored ANOVA (analysis of variance) for some design problems with many process variations. This approach can reduce the simulation cost and can identify which variation sources have strong impacts on the circuit's performance. The simulation results of some circuit and MEMS examples are reported to show the effectiveness of our simulator

cs.CE↗

arXiv2013

Accelerating Dissipative Particle Dynamics Simulations on GPUs: Algorithms, Numerics and Applications

We present a scalable dissipative particle dynamics simulation code, fully implemented on the Graphics Processing Units (GPUs) using a hybrid CUDA/MPI programming model, which achieves 10-30 times speedup on a single GPU over 16 CPU cores and almost linear weak scaling across a thousand nodes. A unified framework is developed within which the efficient generation of the neighbor list and maintaining particle data locality are addressed. Our algorithm generates strictly ordered neighbor lists in parallel, while the construction is deterministic and makes no use of atomic operations or sorting. Such neighbor list leads to optimal data loading efficiency when combined with a two-level particle reordering scheme. A faster in situ generation scheme for Gaussian random numbers is proposed using precomputed binary signatures. We designed custom transcendental functions that are fast and accurate for evaluating the pairwise interaction. The correctness and accuracy of the code is verified through a set of test cases simulating Poiseuille flow and spontaneous vesicle formation. Computer benchmarks demonstrate the speedup of our implementation over the CPU implementation as well as strong and weak scalability. A large-scale simulation of spontaneous vesicle formation consisting of 128 million particles was conducted to further illustrate the practicality of our code in real-world applications.

cs.DC↗

arXiv2011

Multiscale simulation of blood flow in brain arteries with an aneurysm

Interfacing atomistic-based with continuum-based simulation codes is now required in many multiscale physical and biological systems. We present the first results from coupled atomistic-continuum simulations on 190,000 processors. Platelet aggregation in the patient-specific model of an aneurysm has been modeled using a high-order spectral/hp element Navier-Stokes solver with a stochastic (coarse-grained) Molecular Dynamics solver based on Dissipative Particle Dynamics (DPD).

physics.flu-dyn↗