arXiv subjects

Gerardo Odriozola

Publications and source records attributed to Gerardo Odriozola.

17 recordsLinked to original sources

arXiv2026

Phase Boundaries of Bulk 2D Rhombi

We conducted replica exchange Monte Carlo simulations to investigate the phase diagram of identical hard rhombi systems in two dimensions. The rhombi shape varies from nearly square-like, as their minor angle a approaches 90 degrees, to needle-like, as it approaches 0 degrees. For angles near 90 degrees, we observe an isotropic fluid, a rhombatic fluid, a rotator phase, and a columnar space-filling structure with increasing density. Conversely, as a approaches 0 degrees, the results resemble the needle limit. Even for angles as small as a = 20 degrees, we still obtain isotropic, nematic, and rhombatic fluids before reaching a rhombic solid, but the nematic phase gains importance with decreasing a. At a approximately 60 degrees, aperiodic space-filling structures with long-range six-fold orientational symmetry dominate over periodic candidates such as the rhombic and rhombille. This aperiodic solid undergoes a melting process leading to a phase with quasi-long-range six-fold orientational symmetry, a hexatic fluid, before reaching the isotropic phase.

cond-mat.soft↗

arXiv2023

Dynamic neighbors: a proposal of a tool to characterize phase transitions

For molecular dynamics simulations of hard particles, we define dynamic neighbors as the distinct particles that collide with a given reference one during a specific time interval. This definition allows us to determine the distribution of the number of dynamic neighbors, its average, and its standard deviation. We will show that regardless of the time window used to identify dynamic neighbors, their distribution is correlated with diffusion coefficients, structure, and configurational entropy. Thus, it is likely that the distribution of the number of dynamic neighbors may be employed as another tool to gain insights into the dynamic behavior of hard systems. We tested this approach on 2D and 3D systems consisting of monodisperse and binary mixtures of hard disks and spheres. Results show that implementing dynamic neighbors to define order parameters can sharpen the signals where transitions take place.

cond-mat.stat-mech↗

arXiv2020

Three-step melting of hard superdisks in two dimensions

We explore the link between the melting scenarios of two-dimensional systems of hard disks and squares through replica-exchange Monte Carlo simulations of hard superdisks. The well-known melting scenarios are observed in the disk and square limits, while we observe an unusual three-step scenario for dual-shapes. We find that two mesophases mediate the melting: a hexatic phase and another fluid phase with a $D_2$ local symmetry, we call it rhombatic, where both bond and particle orientational orders are quasi-long-range. Our results show that not only can the melting process of liquid-crystal forming molecules be complicated, where elongated shapes stabilize several mesophases, but also that of anisotropic quasispherical molecules.

cond-mat.soft↗

arXiv2017

Critical behavior of hard squares in strong confinement

We examine the phase behavior of a quasi-one-dimensional system of hard squares with side-length $σ$, where the particles are confined between two parallel walls and only nearest neighbor interactions occur. As in our previous work (PRE, 94, 050603 (2016)), the transfer operator method is used, but here we impose a restricted orientation and position approximation to yield an analytic description of the physical properties. This allows us to study the parallel fluid-like to zigzag solid-like structural transition, where the compressibility and heat capacity peaks sharpen and get higher as $H \rightarrow H_c=2\sqrt{2}-1\approx 1.8284$ and $p \rightarrow p_c= \infty$. Here $H$ is the width of the channel measured in $σ$ units and $p$ is the pressure. We have found that this structural change becomes critical at the $(p_c,H_c)$ point. The obtained critical exponents belong to the universality class of the one-dimensional Ising model. We believe this behavior holds for the unrestricted orientational and positional case.

cond-mat.stat-mech↗

arXiv2015

Effect of orientational restriction on monolayers of hard ellipsoids

The effect of out-of-plane orientational freedom on the orientational ordering properties of a monolayer of hard ellipsoids is studied using Parsons-Lee scaling approach and replica exchange Monte Carlo computer simulation. Prolate and oblate ellipsoids exhibit very different ordering properties, namely, the axes of revolution of prolate particles tend to lean out, while those of oblate ones prefer to lean into the confining plane. The driving mechanism of this is that the particles try to maximize the available free area on the confining surface, which can be achieved by minimizing the cross section areas of the particles with the plane. In the lack out-of-plane orientational freedom the monolayer of prolate particles is identical to a two-dimensional hard ellipse system, which undergoes an isotropic-nematic ordering transition with increasing density. With gradually switching on the out-of-plane orientational freedom the prolate particles lean out from the confining plane and a destabilisation of the in-plane isotropic-nematic phase transition is observed. The system of oblate particles behaves oppositely to that of prolates. It corresponds to a two-dimensional system of hard disks in the lack of out-of-plane freedom, while it behaves similar to that of hard ellipses in the freely rotating case.

cond-mat.soft↗

arXiv2015

A heuristic rule for classification of classical fluids: Master curves for Mie, Yukawa and square-well potentials

A shift of the vapor-liquid coexistence curves by the critical value of the reduced second virial coefficient yields striking data collapses to define master curves. This is observed for the Mie, Yukawa and square-well fluids of different attractive ranges. This modification of the extended corresponding-states law of Noro and Frenkel strongly improves the outcomes from the van der Waals principle. Moreover, this shifted extended principle makes the master curves from Mie and Yukawa potentials to be one on top of the other. The square-well potential forms two well defined master curves, each one corresponding to different effective critical exponents.

cond-mat.stat-mech↗

arXiv2014

Ion-specific colloidal aggregation: population balance equations and potential of mean force

Recently reported colloidal aggregation data obtained for different monovalent salts (NaCl, NaNO$_3$, and NaSCN) and at high electrolyte concentrations are matched with the stochastic solutions of the master equation to obtain bond average lifetimes and bond formation probabilities. This was done for a cationic and an anionic system of similar particle size and absolute charge. Following the series Cl$^-$, NO$_3^-$, SCN$^-$, the parameters obtained from the fitting procedure to the kinetic data suggest: i) The existence of a potential of mean force (PMF) barrier and an increasing trend for it for both latices. ii) An increasing trend for the PMF at contact, for the cationic system, and a practically constant value for the anionic system. iii) A decreasing trend for the depth of the secondary minimum. This complex behavior is in general supported by Monte Carlo simulations, which are implemented to obtain the PMF of a pair of colloidal particles immersed in the corresponding electrolyte solution. All these findings contrast the Derjaguin, Landau, Verwey, and Overbeek theory predictions.

cond-mat.soft↗

arXiv2014

Constant-force approach to discontinuous potentials

Aiming to approach the thermodynamical properties of hard-core systems by standard molecular dynamics simulation, we propose setting a repulsive constant-force for overlapping particles. That is, the discontinuity of the pair potential is replaced by a linear function with a large negative slope. Hence, the core-core repulsion, usually modeled with a power function of distance, yields a large force as soon as the cores slightly overlap. This leads to a quasi-hardcore behavior. The idea is tested for a triangle potential of short range. The results obtained by replica exchange molecular dynamics for several repulsive forces are contrasted with the ones obtained for the discontinuous potential and by means of replica exchange Monte Carlo. We found remarkable agreements for the vapor-liquid coexistence densities as well as for the surface tension.

cond-mat.soft↗

arXiv2014

Phase diagram of two-dimensional hard ellipses

We report the phase diagram of two-dimensional hard ellipses as obtained from replica exchange Monte Carlo simulations. The replica exchange is implemented by expanding the isobaric ensemble in pressure. The phase diagram shows four regions: isotropic, nematic, plastic, and solid (letting aside the hexatic phase at the isotropic-plastic two-step transition [PRL 107, 155704 (2011)]). At low anisotropies, the isotropic fluid turns into a plastic phase which in turn yields a solid for increasing pressure (area fraction). Intermediate anisotropies lead to a single first order transition (isotropic-solid). Finally, large anisotropies yield an isotropic-nematic transition at low pressures and a high-pressure nematic-solid transition. We obtain continuous isotropic-nematic transitions. For the transitions involving quasi-long-range positional ordering, i. e. isotropic-plastic, isotropic-solid, and nematic-solid, we observe bimodal probability density functions. This supports first order transition scenarios.

cond-mat.soft↗

arXiv2014

A simple effective rule to estimate the jamming packing fraction of polydisperse hard spheres

A recent proposal in which the equation of state of a polydisperse hard-sphere mixture is mapped onto that of the one-component fluid is extrapolated beyond the freezing point to estimate the jamming packing fraction $ϕ_\text{J}$ of the polydisperse system as a simple function of $M_1M_3/M_2^2$, where $M_k$ is the $k$th moment of the size distribution. An analysis of experimental and simulation data of $ϕ_\text{J}$ for a large number of different mixtures shows a remarkable general agreement with the theoretical estimate. To give extra support to the procedure, simulation data for seventeen mixtures in the high-density region are used to infer the equation of state of the pure hard-sphere system in the metastable region. An excellent collapse of the inferred curves up to the glass transition and a significant narrowing of the different out-of-equilibrium glass branches all the way to jamming are observed. Thus, the present approach provides an extremely simple criterion to unify in a common framework and to give coherence to data coming from very different polydisperse hard-sphere mixtures.

cond-mat.stat-mech↗

arXiv2013

Further details on the phase diagram of hard ellipsoids of revolution

In recent work we revisited the phase diagram of hard ellipsoids of revolution (spheroids) by means of replica exchange Monte Carlo simulations. This was done by setting random initial configurations, and allows to confirm the formation of sm2 crystal structures at high densities [Phys. Rev. E 75, 020402 (2007)] for large anisotropies and stretched-fcc for small anisotropies. In this work we employed the same technique but setting the starting cells as sm2 crystal structures having the maximum known packing density [Phys. Rev. Lett. 92, 255506 (2004)]. This procedure yields a very rich behavior for quasi-spherical oblates and prolates. These systems, from low to high pressures, show the following phases: isotropic fluid, plastic solid, stretched-fcc solid, and sm2 solid. The first three transitions are first order, whereas the last one is a subtle, probably high order transition. This picture is consistent with the fact of having the sm2 structure capable of producing the maximally achievable density.

cond-mat.stat-mech↗

arXiv2012

Revisiting the phase diagram of hard ellipsoids

In this work the well-known Frenkel-Mulder phase diagram of hard ellipsoids of revolution [Mol. Phys. 55, 1171 (1985)] is revisited by means of replica exchange Monte Carlo simulations. The method provides good sampling of dense systems and so, solid phases can be accessed without the need of imposing a given structure. At high densities, we found plastic solids and fcc-like crystals for semi-spherical ellipsoids (prolates and oblates), and SM2 structures [Phys. Rev. E 75, 020402 (2007)] for x:1-prolates and 1:x-oblates with x>=3. The revised fluid-crystal and isotropic-nematic transitions reasonably agree with those presented in the Frenkel-Mulder diagram. An interesting result is that, for small system sizes (100 particles), we obtained 2:1 and 1.5:1-prolate equations of state without transitions, while some order is developed at large densities. Furthermore, the symmetric oblate cases are also reluctant to form ordered phases.

cond-mat.stat-mech↗

arXiv2011

Assisted crystal growing by tempering metastable vapor-liquid fluids

The metastable vapor-liquid coexistence of short-range attractive fluids hinders the formation of crystal nuclei, which in turn makes difficult the progress of the system towards its vapor-solid ground state. In this letter we show that crystal growth can be assisted by imposing temperature fluctuations. By so doing the obtained solid is nearly a fcc monocrystal in contrast with the extreme polycrystalline structure obtained at low temperatures. The study is carried out by combining the replica exchange Monte Carlo method and the standard slab technique. The obtained results suggest a pathway for growing coherent crystals from the metastable liquid. This is particularly relevant for the crystallization of globular proteins.

cond-mat.mes-hall↗

arXiv2010

Equilibrium equation of state of a hard sphere binary mixture at very large densities using replica exchange Monte-Carlo simulations

We use replica exchange Monte-Carlo simulations to measure the equilibrium equation of state of the disordered fluid state for a binary hard sphere mixture up to very large densities where standard Monte-Carlo simulations do not easily reach thermal equilibrium. For the moderate system sizes we use (up to N=100), we find no sign of a pressure discontinuity near the location of dynamic glass singularities extrapolated using either algebraic or simple exponential divergences, suggesting they do not correspond to genuine thermodynamic glass transitions. Several scenarios are proposed for the fate of the fluid state in the thermodynamic limit.

cond-mat.stat-mech↗

arXiv2010

Entropy driven key-lock assembly

The effective interaction between a sphere with an open cavity (lock) and a spherical macroparticle (key), both immersed in a hard sphere fluid, is studied by means of Monte Carlo simulations. As a result, a 2d map of the key-lock effective interaction potential is constructed, which leads to the proposal of a self-assembling mechanism: there exists trajectories through which the key-lock pair could assemble avoiding trespassing potential barriers. Hence, solely the entropic contribution can induce their self-assembling even in the absence of attractive forces. This study points out the solvent contribution within the underlying mechanisms of substrate-protein assembly/disassembly processes, which are important steps of the enzyme catalysis and protein mediated transport.

cond-mat.mes-hall↗

arXiv2010

Replica exchange Monte Carlo applied to Hard Spheres

In this work a replica exchange Monte Carlo scheme which considers an extended isobaric-isothermal ensemble with respect to pressure is applied to study hard spheres (HS). The idea behind the proposal is expanding volume instead of increasing temperature to let crowded systems characterized by dominant repulsive interactions to unblock, and so, to produce sampling from disjoint configurations. The method produces, in a single parallel run, the complete HS equation of state. Thus, the first order fluid-solid transition is captured. The obtained results well agree with previous calculations. This approach seems particularly useful to treat purely entropy-driven systems such as hard body and non-additive hard mixtures, where temperature plays a trivial role.

cond-mat.stat-mech↗

arXiv2008

Population inversion of a NAHS mixture adsorbed into a cylindrical pore

A cylindrical nanopore immersed in a non-additive hard sphere binary fluid is studied by means of integral equation theories and Monte Carlo simulations. It is found that at low and intermediate values of the bulk total number density the more concentrated bulk species is preferentially absorbed by the pore, as expected. However, further increments of the bulk number density lead to an abrupt population inversion in the confined fluid and an entropy driven prewetting transition at the outside wall of the pore. These phenomena are a function of the pore size, the non-additivity parameter, the bulk number density, and particles relative number fraction. We discuss our results in relation to the phase separation in the bulk.

cond-mat.stat-mech↗