arXiv subjects

Gergely Szabó

Publications and source records attributed to Gergely Szabó.

5 recordsLinked to original sources

arXiv2026

Mitigating Pretraining-Induced Attention Asymmetry in 2D+ Electron Microscopy Image Segmentation

Vision models pretrained on large-scale RGB natural image datasets are widely reused for electron microscopy image segmentation. In electron microscopy, volumetric data are acquired as serial sections and processed as stacks of adjacent grayscale slices, where neighboring slices provide symmetric contextual information for identifying features on the central slice. The common strategy maps such stacks to pseudo-RGB inputs to enable transfer learning from pretrained models. However, this mapping imposes channel-specific semantics inherited from natural images, even though electron microscopy slices are homogeneous in the modality and symmetric in their predictive roles. As a result, pretrained models may encode inductive biases that are misaligned with the inherent symmetry of volumetric electron microscopy data. In this work, it is demonstrated that RGB-pretrained models systematically assign unequal importance to individual input slices when applied to stacked electron microscopy data, despite the absence of any intrinsic channel ordering. Using saliency-based attribution analysis across multiple architectures, a consistent channel-level asymmetry was observed that persists after fine-tuning and affects model interpretability, even when segmentation performance is unchanged. To address this issue, a targeted modification of pretraining weights based on uniform channel initialization was proposed, which restores symmetric feature attribution while preserving the benefits of pretraining. Experiments on the SNEMI, Lucchi and GF-PA66 datasets confirm a substantial reduction in attribution bias without compromising or even improving segmentation accuracy.

cs.CV↗

arXiv2025

Enhancing Cell Tracking with a Time-Symmetric Deep Learning Approach

The accurate tracking of live cells using video microscopy recordings remains a challenging task for popular state-of-the-art image processing based object tracking methods. In recent years, several existing and new applications have attempted to integrate deep-learning based frameworks for this task, but most of them still heavily rely on consecutive frame based tracking embedded in their architecture or other premises that hinder generalized learning. To address this issue, we aimed to develop a new deep-learning based tracking method that relies solely on the assumption that cells can be tracked based on their spatio-temporal neighborhood, without restricting it to consecutive frames. The proposed method has the additional benefit that the motion patterns of the cells can be learned completely by the predictor without any prior assumptions, and it has the potential to handle a large number of video frames with heavy artifacts. The efficacy of the proposed method is demonstrated through biologically motivated validation strategies and compared against multiple state-of-the-art cell tracking methods.

eess.IV↗

arXiv2024

Post-Hoc MOTS: Exploring the Capabilities of Time-Symmetric Multi-Object Tracking

Temporal forward-tracking has been the dominant approach for multi-object segmentation and tracking (MOTS). However, a novel time-symmetric tracking methodology has recently been introduced for the detection, segmentation, and tracking of budding yeast cells in pre-recorded samples. Although this architecture has demonstrated a unique perspective on stable and consistent tracking, as well as missed instance re-interpolation, its evaluation has so far been largely confined to settings related to videomicroscopic environments. In this work, we aim to reveal the broader capabilities, advantages, and potential challenges of this architecture across various specifically designed scenarios, including a pedestrian tracking dataset. We also conduct an ablation study comparing the model against its restricted variants and the widely used Kalman filter. Furthermore, we present an attention analysis of the tracking architecture for both pretrained and non-pretrained models

cs.CV↗

arXiv2020

Receptive Field Size Optimization with Continuous Time Pooling

The pooling operation is a cornerstone element of convolutional neural networks. These elements generate receptive fields for neurons, in which local perturbations should have minimal effect on the output activations, increasing robustness and invariance of the network. In this paper we will present an altered version of the most commonly applied method, maximum pooling, where pooling in theory is substituted by a continuous time differential equation, which generates a location sensitive pooling operation, more similar to biological receptive fields. We will present how this continuous method can be approximated numerically using discrete operations which fit ideally on a GPU. In our approach the kernel size is substituted by diffusion strength which is a continuous valued parameter, this way it can be optimized by gradient descent algorithms. We will evaluate the effect of continuous pooling on accuracy and computational need using commonly applied network architectures and datasets.

cs.CV↗

arXiv2019

On the notion of number in humans and machines

In this paper, we performed two types of software experiments to study the numerosity classification (subitizing) in humans and machines. Experiments focus on a particular kind of task is referred to as Semantic MNIST or simply SMNIST where the numerosity of objects placed in an image must be determined. The experiments called SMNIST for Humans are intended to measure the capacity of the Object File System in humans. In this type of experiment the measurement result is in well agreement with the value known from the cognitive psychology literature. The experiments called SMNIST for Machines serve similar purposes but they investigate existing, well known (but originally developed for other purpose) and under development deep learning computer programs. These measurement results can be interpreted similar to the results from SMNIST for Humans. The main thesis of this paper can be formulated as follows: in machines the image classification artificial neural networks can learn to distinguish numerosities with better accuracy when these numerosities are smaller than the capacity of OFS in humans. Finally, we outline a conceptual framework to investigate the notion of number in humans and machines.

cs.CV↗