arXiv subjects

Germain Forestier

Publications and source records attributed to Germain Forestier.

At least 19 recordsLinked to original sources

arXiv2026

Enhancing deep learning models for time series classification via knowledge distillation

Deep learning has achieved remarkable success in various domains including time series analysis, computer vision and natural language processing. However, high computational and memory demands of state-of-the-art architectures pose challenges for deployment in resource-limited environments. Knowledge Distillation (KD) addresses this by transferring knowledge from a large teacher model to a smaller, more efficient student model while maintaining competitive performance. In this work, we investigate the effectiveness of KD for Time Series Classification (TSC) across three architectures: the classical Fully Convolutional Network (FCN), the convolutional Inception model and the transformer-based ConvTran model. We evaluate our approach on UCR Archive, the largest benchmark repository of time series datasets, by modifying architectural components such as convolutional filters, Inception modules and attention heads across the three architectures. Our results consistently show that KD most effectively benefits student models of intermediate complexity across all three architectures, with the distilled FCN student reducing parameters by a factor of 38, the distilled Inception student achieving nearly the same performance as the teacher with 42% fewer parameters and the distilled ConvTran student with 2 attention heads showing the most significant improvement through distillation. To encourage further research and reproducibility, we provide our implementation at https://github.com/MSD-IRIMAS/KD-4-TSC.

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arXiv2026

The Multiverse of Time Series Machine Learning: an Archive for Multivariate Time Series Classification

Time series machine learning (TSML) is a growing research field that spans a wide range of tasks. The popularity of established tasks such as classification, clustering, and extrinsic regression has, in part, been driven by the availability of benchmark datasets. An archive of 30 multivariate time series classification datasets, introduced in 2018 and commonly known as the UEA archive, has since become an essential resource cited in hundreds of publications. We present a substantial expansion of this archive that more than quadruples its size, from 30 to 133 classification problems. We also release preprocessed versions of datasets containing missing values or unequal length series, bringing the total number of datasets to 147. Reflecting the growth of the archive and the broader community, we rebrand it as the Multiverse archive to capture its diversity of domains. The Multiverse archive includes datasets from multiple sources, consolidating other collections and standalone datasets into a single, unified repository. Recognising that running experiments across the full archive is computationally demanding, we recommend a subset of the full archive called Multiverse-core (MV-core) for initial exploration. To support researchers in using the new archive, we provide detailed guidance and a baseline evaluation of established and recent classification algorithms, establishing performance benchmarks for future research. We have created a dedicated repository for the Multiverse archive that provides a common aeon and scikit-learn compatible framework for reproducibility, an extensive record of published results, and an interactive interface to explore the results.

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arXiv2026

Adaptive Structured Pruning of Convolutional Neural Networks for Time Series Classification

Deep learning models for Time Series Classification (TSC) have achieved strong predictive performance but their high computational and memory requirements often limit deployment on resource-constrained devices. While structured pruning can address these issues by removing redundant filters, existing methods typically rely on manually tuned hyperparameters such as pruning ratios which limit scalability and generalization across datasets. In this work, we propose Dynamic Structured Pruning (DSP), a fully automatic, structured pruning framework for convolution-based TSC models. DSP introduces an instance-wise sparsity loss during training to induce channel-level sparsity, followed by a global activation analysis to identify and prune redundant filters without needing any predefined pruning ratio. This work tackles computational bottlenecks of deep TSC models for deployment on resource-constrained devices. We validate DSP on 128 UCR datasets using two different deep state-of-the-art architectures: LITETime and InceptionTime. Our approach achieves an average compression of 58% for LITETime and 75% for InceptionTime architectures while maintaining classification accuracy. Redundancy analyses confirm that DSP produces compact and informative representations, offering a practical path for scalable and efficient deep TSC deployment.

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arXiv2026

Enhancing Time Series Classification with Diversity-Driven Neural Network Ensembles

Ensemble methods have played a crucial role in achieving state-of-the-art (SOTA) performance across various machine learning tasks by leveraging the diversity of features learned by individual models. In Time Series Classification (TSC), ensembles have proven highly effective whether based on neural networks (NNs) or traditional methods like HIVE-COTE. However most existing NN-based ensemble methods for TSC train multiple models with identical architectures and configurations. These ensembles aggregate predictions without explicitly promoting diversity which often leads to redundant feature representations and limits the benefits of ensembling. In this work, we introduce a diversity-driven ensemble learning framework that explicitly encourages feature diversity among neural network ensemble members. Our approach employs a decorrelated learning strategy using a feature orthogonality loss applied directly to the learned feature representations. This ensures that each model in the ensemble captures complementary rather than redundant information. We evaluate our framework on 128 datasets from the UCR archive and show that it achieves SOTA performance with fewer models. This makes our method both efficient and scalable compared to conventional NN-based ensemble approaches.

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arXiv2025

A geometric and deep learning reproducible pipeline for monitoring floating anthropogenic debris in urban rivers using in situ cameras

The proliferation of floating anthropogenic debris in rivers has emerged as a pressing environmental concern, exerting a detrimental influence on biodiversity, water quality, and human activities such as navigation and recreation. The present study proposes a novel methodological framework for the monitoring the aforementioned waste, utilising fixed, in-situ cameras. This study provides two key contributions: (i) the continuous quantification and monitoring of floating debris using deep learning and (ii) the identification of the most suitable deep learning model in terms of accuracy and inference speed under complex environmental conditions. These models are tested in a range of environmental conditions and learning configurations, including experiments on biases related to data leakage. Furthermore, a geometric model is implemented to estimate the actual size of detected objects from a 2D image. This model takes advantage of both intrinsic and extrinsic characteristics of the camera. The findings of this study underscore the significance of the dataset constitution protocol, particularly with respect to the integration of negative images and the consideration of temporal leakage. In conclusion, the feasibility of metric object estimation using projective geometry coupled with regression corrections is demonstrated. This approach paves the way for the development of robust, low-cost, automated monitoring systems for urban aquatic environments.

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arXiv2025

A Standardized Benchmark for Skeleton-Based Rehabilitation Assessment Using Deep Learning

Automated assessment of human motion plays a vital role in rehabilitation, enabling objective evaluation of patient performance and progress. Unlike general human activity recognition, rehabilitation motion assessment focuses on analyzing the quality of movement within the same action class, requiring the detection of subtle deviations from ideal motion. Recent advances in deep learning and video-based skeleton extraction have opened new possibilities for accessible, scalable motion assessment using affordable devices such as smartphones or webcams. However, the field lacks standardized benchmarks, consistent evaluation protocols, and reproducible methodologies, limiting progress and comparability across studies. In this work, we address these gaps by (i) aggregating existing rehabilitation datasets into a unified archive called Rehab-Pile, (ii) proposing a general benchmarking framework for evaluating deep learning methods in this domain, and (iii) conducting extensive benchmarking of multiple architectures across classification and regression tasks. All datasets and implementations are released to the community to support transparency and reproducibility. This paper aims to establish a solid foundation for future research in automated rehabilitation assessment and foster the development of reliable, accessible, and personalized rehabilitation solutions. The datasets, source-code and results of this article are all publicly available.

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arXiv2025

Failure Risk Prediction in a MOOC: A Multivariate Time Series Analysis Approach

MOOCs offer free and open access to a wide audience, but completion rates remain low, often due to a lack of personalized content. To address this issue, it is essential to predict learner performance in order to provide tailored feedback. Behavioral traces-such as clicks and events-can be analyzed as time series to anticipate learners' outcomes. This work compares multivariate time series classification methods to identify at-risk learners at different stages of the course (after 5, 10 weeks, etc.). The experimental evaluation, conducted on the Open University Learning Analytics Dataset (OULAD), focuses on three courses: two in STEM and one in SHS. Preliminary results show that the evaluated approaches are promising for predicting learner failure in MOOCs. The analysis also suggests that prediction accuracy is influenced by the amount of recorded interactions, highlighting the importance of rich and diverse behavioral data.

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arXiv2024

Look Into the LITE in Deep Learning for Time Series Classification

Deep learning models have been shown to be a powerful solution for Time Series Classification (TSC). State-of-the-art architectures, while producing promising results on the UCR and the UEA archives , present a high number of trainable parameters. This can lead to long training with high CO2 emission, power consumption and possible increase in the number of FLoating-point Operation Per Second (FLOPS). In this paper, we present a new architecture for TSC, the Light Inception with boosTing tEchnique (LITE) with only 2.34% of the number of parameters of the state-of-the-art InceptionTime model, while preserving performance. This architecture, with only 9, 814 trainable parameters due to the usage of DepthWise Separable Convolutions (DWSC), is boosted by three techniques: multiplexing, custom filters, and dilated convolution. The LITE architecture, trained on the UCR, is 2.78 times faster than InceptionTime and consumes 2.79 times less CO2 and power. To evaluate the performance of the proposed architecture on multivariate time series data, we adapt LITE to handle multivariate time series, we call this version LITEMV. To bring theory into application, we also conducted experiments using LITEMV on multivariate time series representing human rehabilitation movements, showing that LITEMV not only is the most efficient model but also the best performing for this application on the Kimore dataset, a skeleton based human rehabilitation exercises dataset. Moreover, to address the interpretability of LITEMV, we present a study using Class Activation Maps to understand the classification decision taken by the model during evaluation.

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arXiv2024

Establishing a Unified Evaluation Framework for Human Motion Generation: A Comparative Analysis of Metrics

The development of generative artificial intelligence for human motion generation has expanded rapidly, necessitating a unified evaluation framework. This paper presents a detailed review of eight evaluation metrics for human motion generation, highlighting their unique features and shortcomings. We propose standardized practices through a unified evaluation setup to facilitate consistent model comparisons. Additionally, we introduce a novel metric that assesses diversity in temporal distortion by analyzing warping diversity, thereby enhancing the evaluation of temporal data. We also conduct experimental analyses of three generative models using a publicly available dataset, offering insights into the interpretation of each metric in specific case scenarios. Our goal is to offer a clear, user-friendly evaluation framework for newcomers, complemented by publicly accessible code.

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arXiv2024

The impact of data set similarity and diversity on transfer learning success in time series forecasting

Pre-trained models have become pivotal in enhancing the efficiency and accuracy of time series forecasting on target data sets by leveraging transfer learning. While benchmarks validate the performance of model generalization on various target data sets, there is no structured research providing similarity and diversity measures to explain which characteristics of source and target data lead to transfer learning success. Our study pioneers in systematically evaluating the impact of source-target similarity and source diversity on zero-shot and fine-tuned forecasting outcomes in terms of accuracy, bias, and uncertainty estimation. We investigate these dynamics using pre-trained neural networks across five public source datasets, applied to forecasting five target data sets, including real-world wholesales data. We identify two feature-based similarity and diversity measures, finding that source-target similarity reduces forecasting bias, while source diversity improves forecasting accuracy and uncertainty estimation, but increases the bias.

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arXiv2023

Finding Foundation Models for Time Series Classification with a PreText Task

Over the past decade, Time Series Classification (TSC) has gained an increasing attention. While various methods were explored, deep learning - particularly through Convolutional Neural Networks (CNNs)-stands out as an effective approach. However, due to the limited availability of training data, defining a foundation model for TSC that overcomes the overfitting problem is still a challenging task. The UCR archive, encompassing a wide spectrum of datasets ranging from motion recognition to ECG-based heart disease detection, serves as a prime example for exploring this issue in diverse TSC scenarios. In this paper, we address the overfitting challenge by introducing pre-trained domain foundation models. A key aspect of our methodology is a novel pretext task that spans multiple datasets. This task is designed to identify the originating dataset of each time series sample, with the goal of creating flexible convolution filters that can be applied across different datasets. The research process consists of two phases: a pre-training phase where the model acquires general features through the pretext task, and a subsequent fine-tuning phase for specific dataset classifications. Our extensive experiments on the UCR archive demonstrate that this pre-training strategy significantly outperforms the conventional training approach without pre-training. This strategy effectively reduces overfitting in small datasets and provides an efficient route for adapting these models to new datasets, thus advancing the capabilities of deep learning in TSC.

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arXiv2023

ShapeDBA: Generating Effective Time Series Prototypes using ShapeDTW Barycenter Averaging

Time series data can be found in almost every domain, ranging from the medical field to manufacturing and wireless communication. Generating realistic and useful exemplars and prototypes is a fundamental data analysis task. In this paper, we investigate a novel approach to generating realistic and useful exemplars and prototypes for time series data. Our approach uses a new form of time series average, the ShapeDTW Barycentric Average. We therefore turn our attention to accurately generating time series prototypes with a novel approach. The existing time series prototyping approaches rely on the Dynamic Time Warping (DTW) similarity measure such as DTW Barycentering Average (DBA) and SoftDBA. These last approaches suffer from a common problem of generating out-of-distribution artifacts in their prototypes. This is mostly caused by the DTW variant used and its incapability of detecting neighborhood similarities, instead it detects absolute similarities. Our proposed method, ShapeDBA, uses the ShapeDTW variant of DTW, that overcomes this issue. We chose time series clustering, a popular form of time series analysis to evaluate the outcome of ShapeDBA compared to the other prototyping approaches. Coupled with the k-means clustering algorithm, and evaluated on a total of 123 datasets from the UCR archive, our proposed averaging approach is able to achieve new state-of-the-art results in terms of Adjusted Rand Index.

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arXiv2023

An Approach to Multiple Comparison Benchmark Evaluations that is Stable Under Manipulation of the Comparate Set

The measurement of progress using benchmarks evaluations is ubiquitous in computer science and machine learning. However, common approaches to analyzing and presenting the results of benchmark comparisons of multiple algorithms over multiple datasets, such as the critical difference diagram introduced by Dem\v{s}ar (2006), have important shortcomings and, we show, are open to both inadvertent and intentional manipulation. To address these issues, we propose a new approach to presenting the results of benchmark comparisons, the Multiple Comparison Matrix (MCM), that prioritizes pairwise comparisons and precludes the means of manipulating experimental results in existing approaches. MCM can be used to show the results of an all-pairs comparison, or to show the results of a comparison between one or more selected algorithms and the state of the art. MCM is implemented in Python and is publicly available.

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arXiv2023

Deep Learning for Time Series Classification and Extrinsic Regression: A Current Survey

Time Series Classification and Extrinsic Regression are important and challenging machine learning tasks. Deep learning has revolutionized natural language processing and computer vision and holds great promise in other fields such as time series analysis where the relevant features must often be abstracted from the raw data but are not known a priori. This paper surveys the current state of the art in the fast-moving field of deep learning for time series classification and extrinsic regression. We review different network architectures and training methods used for these tasks and discuss the challenges and opportunities when applying deep learning to time series data. We also summarize two critical applications of time series classification and extrinsic regression, human activity recognition and satellite earth observation.

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arXiv2021

Surgical Data Science -- from Concepts toward Clinical Translation

Recent developments in data science in general and machine learning in particular have transformed the way experts envision the future of surgery. Surgical Data Science (SDS) is a new research field that aims to improve the quality of interventional healthcare through the capture, organization, analysis and modeling of data. While an increasing number of data-driven approaches and clinical applications have been studied in the fields of radiological and clinical data science, translational success stories are still lacking in surgery. In this publication, we shed light on the underlying reasons and provide a roadmap for future advances in the field. Based on an international workshop involving leading researchers in the field of SDS, we review current practice, key achievements and initiatives as well as available standards and tools for a number of topics relevant to the field, namely (1) infrastructure for data acquisition, storage and access in the presence of regulatory constraints, (2) data annotation and sharing and (3) data analytics. We further complement this technical perspective with (4) a review of currently available SDS products and the translational progress from academia and (5) a roadmap for faster clinical translation and exploitation of the full potential of SDS, based on an international multi-round Delphi process.

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arXiv2021

An automatic framework for fusing information from differently stained consecutive digital whole slide images: A case study in renal histology

Objective: This article presents an automatic image processing framework to extract quantitative high-level information describing the micro-environment of glomeruli in consecutive whole slide images (WSIs) processed with different staining modalities of patients with chronic kidney rejection after kidney transplantation. Methods: This four-step framework consists of: 1) approximate rigid registration, 2) cell and anatomical structure segmentation 3) fusion of information from different stainings using a newly developed registration algorithm 4) feature extraction. Results: Each step of the framework is validated independently both quantitatively and qualitatively by pathologists. An illustration of the different types of features that can be extracted is presented. Conclusion: The proposed generic framework allows for the analysis of the micro-environment surrounding large structures that can be segmented (either manually or automatically). It is independent of the segmentation approach and is therefore applicable to a variety of biomedical research questions. Significance: Chronic tissue remodelling processes after kidney transplantation can result in interstitial fibrosis and tubular atrophy (IFTA) and glomerulosclerosis. This pipeline provides tools to quantitatively analyse, in the same spatial context, information from different consecutive WSIs and help researchers understand the complex underlying mechanisms leading to IFTA and glomerulosclerosis.

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arXiv2020

InceptionTime: Finding AlexNet for Time Series Classification

This paper brings deep learning at the forefront of research into Time Series Classification (TSC). TSC is the area of machine learning tasked with the categorization (or labelling) of time series. The last few decades of work in this area have led to significant progress in the accuracy of classifiers, with the state of the art now represented by the HIVE-COTE algorithm. While extremely accurate, HIVE-COTE cannot be applied to many real-world datasets because of its high training time complexity in O(N2 * T4) for a dataset with N time series of length T. For example, it takes HIVE-COTE more than 8 days to learn from a small dataset with N = 1500 time series of short length T = 46. Meanwhile deep learning has received enormous attention because of its high accuracy and scalability. Recent approaches to deep learning for TSC have been scalable, but less accurate than HIVE-COTE. We introduce InceptionTime - an ensemble of deep Convolutional Neural Network (CNN) models, inspired by the Inception-v4 architecture. Our experiments show that InceptionTime is on par with HIVE-COTE in terms of accuracy while being much more scalable: not only can it learn from 1,500 time series in one hour but it can also learn from 8M time series in 13 hours, a quantity of data that is fully out of reach of HIVE-COTE.

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arXiv2019

Accurate and interpretable evaluation of surgical skills from kinematic data using fully convolutional neural networks

Purpose: Manual feedback from senior surgeons observing less experienced trainees is a laborious task that is very expensive, time-consuming and prone to subjectivity. With the number of surgical procedures increasing annually, there is an unprecedented need to provide an accurate, objective and automatic evaluation of trainees' surgical skills in order to improve surgical practice. Methods: In this paper, we designed a convolutional neural network (CNN) to classify surgical skills by extracting latent patterns in the trainees' motions performed during robotic surgery. The method is validated on the JIGSAWS dataset for two surgical skills evaluation tasks: classification and regression. Results: Our results show that deep neural networks constitute robust machine learning models that are able to reach new competitive state-of-the-art performance on the JIGSAWS dataset. While we leveraged from CNNs' efficiency, we were able to minimize its black-box effect using the class activation map technique. Conclusions: This characteristic allowed our method to automatically pinpoint which parts of the surgery influenced the skill evaluation the most, thus allowing us to explain a surgical skill classification and provide surgeons with a novel personalized feedback technique. We believe this type of interpretable machine learning model could integrate within "Operation Room 2.0" and support novice surgeons in improving their skills to eventually become experts.

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