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Ghassan AlRegib

Publications and source records attributed to Ghassan AlRegib.

At least 37 records · Page 2Linked to original sources

Targeting Negative Flips in Active Learning using Validation Sets

The performance of active learning algorithms can be improved in two ways. The often used and intuitive way is by reducing the overall error rate within the test set. The second way is to ensure that correct predictions are not forgotten when the training set is increased in between rounds. The former is measured by the accuracy of the model and the latter is captured in negative flips between rounds. Negative flips are samples that are correctly predicted when trained with the previous/smaller dataset and incorrectly predicted after additional samples are labeled. In this paper, we discuss improving the performance of active learning algorithms both in terms of prediction accuracy and negative flips. The first observation we make in this paper is that negative flips and overall error rates are decoupled and reducing one does not necessarily imply that the other is reduced. Our observation is important as current active learning algorithms do not consider negative flips directly and implicitly assume the opposite. The second observation is that performing targeted active learning on subsets of the unlabeled pool has a significant impact on the behavior of the active learning algorithm and influences both negative flips and prediction accuracy. We then develop ROSE - a plug-in algorithm that utilizes a small labeled validation set to restrict arbitrary active learning acquisition functions to negative flips within the unlabeled pool. We show that integrating a validation set results in a significant performance boost in terms of accuracy, negative flip rate reduction, or both.

cs.LG↗

Benchmarking Human and Automated Prompting in the Segment Anything Model

The remarkable capabilities of the Segment Anything Model (SAM) for tackling image segmentation tasks in an intuitive and interactive manner has sparked interest in the design of effective visual prompts. Such interest has led to the creation of automated point prompt selection strategies, typically motivated from a feature extraction perspective. However, there is still very little understanding of how appropriate these automated visual prompting strategies are, particularly when compared to humans, across diverse image domains. Additionally, the performance benefits of including such automated visual prompting strategies within the finetuning process of SAM also remains unexplored, as does the effect of interpretable factors like distance between the prompt points on segmentation performance. To bridge these gaps, we leverage a recently released visual prompting dataset, PointPrompt, and introduce a number of benchmarking tasks that provide an array of opportunities to improve the understanding of the way human prompts differ from automated ones and what underlying factors make for effective visual prompts. We demonstrate that the resulting segmentation scores obtained by humans are approximately 29% higher than those given by automated strategies and identify potential features that are indicative of prompting performance with $R^2$ scores over 0.5. Additionally, we demonstrate that performance when using automated methods can be improved by up to 68% via a finetuning approach. Overall, our experiments not only showcase the existing gap between human prompts and automated methods, but also highlight potential avenues through which this gap can be leveraged to improve effective visual prompt design. Further details along with the dataset links and codes are available at https://github.com/olivesgatech/PointPrompt

cs.CV↗

HEX: Hierarchical Emergence Exploitation in Self-Supervised Algorithms

In this paper, we propose an algorithm that can be used on top of a wide variety of self-supervised (SSL) approaches to take advantage of hierarchical structures that emerge during training. SSL approaches typically work through some invariance term to ensure consistency between similar samples and a regularization term to prevent global dimensional collapse. Dimensional collapse refers to data representations spanning a lower-dimensional subspace. Recent work has demonstrated that the representation space of these algorithms gradually reflects a semantic hierarchical structure as training progresses. Data samples of the same hierarchical grouping tend to exhibit greater dimensional collapse locally compared to the dataset as a whole due to sharing features in common with each other. Ideally, SSL algorithms would take advantage of this hierarchical emergence to have an additional regularization term to account for this local dimensional collapse effect. However, the construction of existing SSL algorithms does not account for this property. To address this, we propose an adaptive algorithm that performs a weighted decomposition of the denominator of the InfoNCE loss into two terms: local hierarchical and global collapse regularization respectively. This decomposition is based on an adaptive threshold that gradually lowers to reflect the emerging hierarchical structure of the representation space throughout training. It is based on an analysis of the cosine similarity distribution of samples in a batch. We demonstrate that this hierarchical emergence exploitation (HEX) approach can be integrated across a wide variety of SSL algorithms. Empirically, we show performance improvements of up to 5.6% relative improvement over baseline SSL approaches on classification accuracy on Imagenet with 100 epochs of training.

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Ophthalmic Biomarker Detection: Highlights from the IEEE Video and Image Processing Cup 2023 Student Competition

The VIP Cup offers a unique experience to undergraduates, allowing students to work together to solve challenging, real-world problems with video and image processing techniques. In this iteration of the VIP Cup, we challenged students to balance personalization and generalization when performing biomarker detection in 3D optical coherence tomography (OCT) images. Balancing personalization and generalization is an important challenge to tackle, as the variation within OCT scans of patients between visits can be minimal while the difference in manifestation of the same disease across different patients may be substantial. The domain difference between OCT scans can arise due to pathology manifestation across patients, clinical labels, and the visit along the treatment process when the scan is taken. Hence, we provided a multimodal OCT dataset to allow teams to effectively target this challenge. Overall, this competition gave undergraduates an opportunity to learn about how artificial intelligence can be a powerful tool for the medical field, as well as the unique challenges one faces when applying machine learning to biomedical data.

eess.IV↗

CRACKS: Crowdsourcing Resources for Analysis and Categorization of Key Subsurface faults

Crowdsourcing annotations has created a paradigm shift in the availability of labeled data for machine learning. Availability of large datasets has accelerated progress in common knowledge applications involving visual and language data. However, specialized applications that require expert labels lag in data availability. One such application is fault segmentation in subsurface imaging. Detecting, tracking, and analyzing faults has broad societal implications in predicting fluid flows, earthquakes, and storing excess atmospheric CO$_2$. However, delineating faults with current practices is a labor-intensive activity that requires precise analysis of subsurface imaging data by geophysicists. In this paper, we propose the $\texttt{CRACKS}$ dataset to detect and segment faults in subsurface images by utilizing crowdsourced resources. We leverage Amazon Mechanical Turk to obtain fault delineations from sections of the Netherlands North Sea subsurface images from (i) $26$ novices who have no exposure to subsurface data and were shown a video describing and labeling faults, (ii) $8$ practitioners who have previously interacted and worked on subsurface data, (iii) one geophysicist to label $7636$ faults in the region. Note that all novices, practitioners, and the expert segment faults on the same subsurface volume with disagreements between and among the novices and practitioners. Additionally, each fault annotation is equipped with the confidence level of the annotator. The paper provides benchmarks on detecting and segmenting the expert labels, given the novice and practitioner labels. Additional details along with the dataset links and codes are available at $\href{https://alregib.ece.gatech.edu/cracks-crowdsourcing-resources-for-analysis-and-categorization-of-key-subsurface-faults/}{link}$.

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Are Objective Explanatory Evaluation metrics Trustworthy? An Adversarial Analysis

Explainable AI (XAI) has revolutionized the field of deep learning by empowering users to have more trust in neural network models. The field of XAI allows users to probe the inner workings of these algorithms to elucidate their decision-making processes. The rise in popularity of XAI has led to the advent of different strategies to produce explanations, all of which only occasionally agree. Thus several objective evaluation metrics have been devised to decide which of these modules give the best explanation for specific scenarios. The goal of the paper is twofold: (i) we employ the notions of necessity and sufficiency from causal literature to come up with a novel explanatory technique called SHifted Adversaries using Pixel Elimination(SHAPE) which satisfies all the theoretical and mathematical criteria of being a valid explanation, (ii) we show that SHAPE is, infact, an adversarial explanation that fools causal metrics that are employed to measure the robustness and reliability of popular importance based visual XAI methods. Our analysis shows that SHAPE outperforms popular explanatory techniques like GradCAM and GradCAM++ in these tests and is comparable to RISE, raising questions about the sanity of these metrics and the need for human involvement for an overall better evaluation.

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Intelligent Multi-View Test Time Augmentation

In this study, we introduce an intelligent Test Time Augmentation (TTA) algorithm designed to enhance the robustness and accuracy of image classification models against viewpoint variations. Unlike traditional TTA methods that indiscriminately apply augmentations, our approach intelligently selects optimal augmentations based on predictive uncertainty metrics. This selection is achieved via a two-stage process: the first stage identifies the optimal augmentation for each class by evaluating uncertainty levels, while the second stage implements an uncertainty threshold to determine when applying TTA would be advantageous. This methodological advancement ensures that augmentations contribute to classification more effectively than a uniform application across the dataset. Experimental validation across several datasets and neural network architectures validates our approach, yielding an average accuracy improvement of 1.73% over methods that use single-view images. This research underscores the potential of adaptive, uncertainty-aware TTA in improving the robustness of image classification in the presence of viewpoint variations, paving the way for further exploration into intelligent augmentation strategies.

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Explaining Representation Learning with Perceptual Components

Self-supervised models create representation spaces that lack clear semantic meaning. This interpretability problem of representations makes traditional explainability methods ineffective in this context. In this paper, we introduce a novel method to analyze representation spaces using three key perceptual components: color, shape, and texture. We employ selective masking of these components to observe changes in representations, resulting in distinct importance maps for each. In scenarios, where labels are absent, these importance maps provide more intuitive explanations as they are integral to the human visual system. Our approach enhances the interpretability of the representation space, offering explanations that resonate with human visual perception. We analyze how different training objectives create distinct representation spaces using perceptual components. Additionally, we examine the representation of images across diverse image domains, providing insights into the role of these components in different contexts.

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Taxes Are All You Need: Integration of Taxonomical Hierarchy Relationships into the Contrastive Loss

In this work, we propose a novel supervised contrastive loss that enables the integration of taxonomic hierarchy information during the representation learning process. A supervised contrastive loss operates by enforcing that images with the same class label (positive samples) project closer to each other than images with differing class labels (negative samples). The advantage of this approach is that it directly penalizes the structure of the representation space itself. This enables greater flexibility with respect to encoding semantic concepts. However, the standard supervised contrastive loss only enforces semantic structure based on the downstream task (i.e. the class label). In reality, the class label is only one level of a \emph{hierarchy of different semantic relationships known as a taxonomy}. For example, the class label is oftentimes the species of an animal, but between different classes there are higher order relationships such as all animals with wings being ``birds". We show that by explicitly accounting for these relationships with a weighting penalty in the contrastive loss we can out-perform the supervised contrastive loss. Additionally, we demonstrate the adaptability of the notion of a taxonomy by integrating our loss into medical and noise-based settings that show performance improvements by as much as 7%.

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Transitional Uncertainty with Layered Intermediate Predictions

In this paper, we discuss feature engineering for single-pass uncertainty estimation. For accurate uncertainty estimates, neural networks must extract differences in the feature space that quantify uncertainty. This could be achieved by current single-pass approaches that maintain feature distances between data points as they traverse the network. While initial results are promising, maintaining feature distances within the network representations frequently inhibits information compression and opposes the learning objective. We study this effect theoretically and empirically to arrive at a simple conclusion: preserving feature distances in the output is beneficial when the preserved features contribute to learning the label distribution and act in opposition otherwise. We then propose Transitional Uncertainty with Layered Intermediate Predictions (TULIP) as a simple approach to address the shortcomings of current single-pass estimators. Specifically, we implement feature preservation by extracting features from intermediate representations before information is collapsed by subsequent layers. We refer to the underlying preservation mechanism as transitional feature preservation. We show that TULIP matches or outperforms current single-pass methods on standard benchmarks and in practical settings where these methods are less reliable (imbalances, complex architectures, medical modalities).

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VOICE: Variance of Induced Contrastive Explanations to quantify Uncertainty in Neural Network Interpretability

In this paper, we visualize and quantify the predictive uncertainty of gradient-based post hoc visual explanations for neural networks. Predictive uncertainty refers to the variability in the network predictions under perturbations to the input. Visual post hoc explainability techniques highlight features within an image to justify a network's prediction. We theoretically show that existing evaluation strategies of visual explanatory techniques partially reduce the predictive uncertainty of neural networks. This analysis allows us to construct a plug in approach to visualize and quantify the remaining predictive uncertainty of any gradient-based explanatory technique. We show that every image, network, prediction, and explanatory technique has a unique uncertainty. The proposed uncertainty visualization and quantification yields two key observations. Firstly, oftentimes under incorrect predictions, explanatory techniques are uncertain about the same features that they are attributing the predictions to, thereby reducing the trustworthiness of the explanation. Secondly, objective metrics of an explanation's uncertainty, empirically behave similarly to epistemic uncertainty. We support these observations on two datasets, four explanatory techniques, and six neural network architectures. The code is available at https://github.com/olivesgatech/VOICE-Uncertainty.

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Effective Data Selection for Seismic Interpretation through Disagreement

This paper presents a discussion on data selection for deep learning in the field of seismic interpretation. In order to achieve a robust generalization to the target volume, it is crucial to identify the specific samples are the most informative to the training process. The selection of the training set from a target volume is a critical factor in determining the effectiveness of the deep learning algorithm for interpreting seismic volumes. This paper proposes the inclusion of interpretation disagreement as a valuable and intuitive factor in the process of selecting training sets. The development of a novel data selection framework is inspired by established practices in seismic interpretation. The framework we have developed utilizes representation shifts to effectively model interpretation disagreement within neural networks. Additionally, it incorporates the disagreement measure to enhance attention towards geologically interesting regions throughout the data selection workflow. By combining this approach with active learning, a well-known machine learning paradigm for data selection, we arrive at a comprehensive and innovative framework for training set selection in seismic interpretation. In addition, we offer a specific implementation of our proposed framework, which we have named ATLAS. This implementation serves as a means for data selection. In this study, we present the results of our comprehensive experiments, which clearly indicate that ATLAS consistently surpasses traditional active learning frameworks in the field of seismic interpretation. Our findings reveal that ATLAS achieves improvements of up to 12% in mean intersection-over-union.

physics.geo-ph↗

Counterfactual Gradients-based Quantification of Prediction Trust in Neural Networks

The widespread adoption of deep neural networks in machine learning calls for an objective quantification of esoteric trust. In this paper we propose GradTrust, a classification trust measure for large-scale neural networks at inference. The proposed method utilizes variance of counterfactual gradients, i.e. the required changes in the network parameters if the label were different. We show that GradTrust is superior to existing techniques for detecting misprediction rates on $50000$ images from ImageNet validation dataset. Depending on the network, GradTrust detects images where either the ground truth is incorrect or ambiguous, or the classes are co-occurring. We extend GradTrust to Video Action Recognition on Kinetics-400 dataset. We showcase results on $14$ architectures pretrained on ImageNet and $5$ architectures pretrained on Kinetics-400. We observe the following: (i) simple methodologies like negative log likelihood and margin classifiers outperform state-of-the-art uncertainty and out-of-distribution detection techniques for misprediction rates, and (ii) the proposed GradTrust is in the Top-2 performing methods on $37$ of the considered $38$ experimental modalities. The code is available at: https://github.com/olivesgatech/GradTrust

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TrajPRed: Trajectory Prediction with Region-based Relation Learning

Forecasting human trajectories in traffic scenes is critical for safety within mixed or fully autonomous systems. Human future trajectories are driven by two major stimuli, social interactions, and stochastic goals. Thus, reliable forecasting needs to capture these two stimuli. Edge-based relation modeling represents social interactions using pairwise correlations from precise individual states. Nevertheless, edge-based relations can be vulnerable under perturbations. To alleviate these issues, we propose a region-based relation learning paradigm that models social interactions via region-wise dynamics of joint states, i.e., the changes in the density of crowds. In particular, region-wise agent joint information is encoded within convolutional feature grids. Social relations are modeled by relating the temporal changes of local joint information from a global perspective. We show that region-based relations are less susceptible to perturbations. In order to account for the stochastic individual goals, we exploit a conditional variational autoencoder to realize multi-goal estimation and diverse future prediction. Specifically, we perform variational inference via the latent distribution, which is conditioned on the correlation between input states and associated target goals. Sampling from the latent distribution enables the framework to reliably capture the stochastic behavior in test data. We integrate multi-goal estimation and region-based relation learning to model the two stimuli, social interactions, and stochastic goals, in a prediction framework. We evaluate our framework on the ETH-UCY dataset and Stanford Drone Dataset (SDD). We show that the diverse prediction better fits the ground truth when incorporating the relation module. Our framework outperforms the state-of-the-art models on SDD by $27.61\%$/$18.20\%$ of ADE/FDE metrics.

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Perceptual Quality-based Model Training under Annotator Label Uncertainty

Annotators exhibit disagreement during data labeling, which can be termed as annotator label uncertainty. Annotator label uncertainty manifests in variations of labeling quality. Training with a single low-quality annotation per sample induces model reliability degradations. In this work, we first examine the effects of annotator label uncertainty in terms of the model's generalizability and prediction uncertainty. We observe that the model's generalizability and prediction uncertainty degrade with the presence of low-quality noisy labels. Meanwhile, our evaluation of existing uncertainty estimation algorithms indicates their incapability in response to annotator label uncertainty. To mitigate performance degradation, prior methods show that training models with labels collected from multiple independent annotators can enhance generalizability. However, they require massive annotations. Hence, we introduce a novel perceptual quality-based model training framework to objectively generate multiple labels for model training to enhance reliability, while avoiding massive annotations. Specifically, we first select a subset of samples with low perceptual quality scores ranked by statistical regularities of visual signals. We then assign de-aggregated labels to each sample in this subset to obtain a training set with multiple labels. Our experiments and analysis demonstrate that training with the proposed framework alleviates the degradation of generalizability and prediction uncertainty caused by annotator label uncertainty.

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FOCAL: A Cost-Aware Video Dataset for Active Learning

In this paper, we introduce the FOCAL (Ford-OLIVES Collaboration on Active Learning) dataset which enables the study of the impact of annotation-cost within a video active learning setting. Annotation-cost refers to the time it takes an annotator to label and quality-assure a given video sequence. A practical motivation for active learning research is to minimize annotation-cost by selectively labeling informative samples that will maximize performance within a given budget constraint. However, previous work in video active learning lacks real-time annotation labels for accurately assessing cost minimization and instead operates under the assumption that annotation-cost scales linearly with the amount of data to annotate. This assumption does not take into account a variety of real-world confounding factors that contribute to a nonlinear cost such as the effect of an assistive labeling tool and the variety of interactions within a scene such as occluded objects, weather, and motion of objects. FOCAL addresses this discrepancy by providing real annotation-cost labels for 126 video sequences across 69 unique city scenes with a variety of weather, lighting, and seasonal conditions. We also introduce a set of conformal active learning algorithms that take advantage of the sequential structure of video data in order to achieve a better trade-off between annotation-cost and performance while also reducing floating point operations (FLOPS) overhead by at least 77.67%. We show how these approaches better reflect how annotations on videos are done in practice through a sequence selection framework. We further demonstrate the advantage of these approaches by introducing two performance-cost metrics and show that the best conformal active learning method is cheaper than the best traditional active learning method by 113 hours.

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Clinical Trial Active Learning

This paper presents a novel approach to active learning that takes into account the non-independent and identically distributed (non-i.i.d.) structure of a clinical trial setting. There exists two types of clinical trials: retrospective and prospective. Retrospective clinical trials analyze data after treatment has been performed; prospective clinical trials collect data as treatment is ongoing. Typically, active learning approaches assume the dataset is i.i.d. when selecting training samples; however, in the case of clinical trials, treatment results in a dependency between the data collected at the current and past visits. Thus, we propose prospective active learning to overcome the limitations present in traditional active learning methods and apply it to disease detection in optical coherence tomography (OCT) images, where we condition on the time an image was collected to enforce the i.i.d. assumption. We compare our proposed method to the traditional active learning paradigm, which we refer to as retrospective in nature. We demonstrate that prospective active learning outperforms retrospective active learning in two different types of test settings.

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Clinically Labeled Contrastive Learning for OCT Biomarker Classification

This paper presents a novel positive and negative set selection strategy for contrastive learning of medical images based on labels that can be extracted from clinical data. In the medical field, there exists a variety of labels for data that serve different purposes at different stages of a diagnostic and treatment process. Clinical labels and biomarker labels are two examples. In general, clinical labels are easier to obtain in larger quantities because they are regularly collected during routine clinical care, while biomarker labels require expert analysis and interpretation to obtain. Within the field of ophthalmology, previous work has shown that clinical values exhibit correlations with biomarker structures that manifest within optical coherence tomography (OCT) scans. We exploit this relationship by using the clinical data as pseudo-labels for our data without biomarker labels in order to choose positive and negative instances for training a backbone network with a supervised contrastive loss. In this way, a backbone network learns a representation space that aligns with the clinical data distribution available. Afterwards, we fine-tune the network trained in this manner with the smaller amount of biomarker labeled data with a cross-entropy loss in order to classify these key indicators of disease directly from OCT scans. We also expand on this concept by proposing a method that uses a linear combination of clinical contrastive losses. We benchmark our methods against state of the art self-supervised methods in a novel setting with biomarkers of varying granularity. We show performance improvements by as much as 5\% in total biomarker detection AUROC.

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