arXiv subjects

Giorgio Pastore

Publications and source records attributed to Giorgio Pastore.

16 recordsLinked to original sources

arXiv2024

The interplay between liquid-liquid and ferroelectric phase transitions in supercooled water

The distinctive characteristics of water, evident in its thermodynamic anomalies, have implications across disciplines from biology to geophysics. Considered a valid hypothesis to rationalize its unique properties, a liquid-liquid phase transition in water's supercooled regime has nowadays been observed in several molecular dynamics simulations and is being actively researched experimentally. Here, we highlight intriguing and far-reaching implications of water: the ferroelectric and liquid-liquid phase transitions can be designed as two facets of the same underlying phenomenon. Our results are based on the analysis of extensive molecular dynamics simulations and are explained in the context of a classical density functional theory in mean-field approximation valid for a polar liquid. The theory underpins the potential role of ferroelectricity in promoting the liquid-liquid phase transition. The existence of ferroelectric order in supercooled low-density liquid water is confirmed by the observation in molecular dynamics simulations of collective modes in polarization fluctuations dynamics, traceable to spontaneous breaking of continuous rotational symmetry. Our work opens the door to new experimental investigations of the static and dynamic behavior of water polarization.

cond-mat.soft↗

arXiv2022

The SIRAH force-field and interactions between short DNA duplexes

In recent years, short DNA duplexes have been studied as an interesting self-assembling system and a building block for DNA-based nanotechnologies. Numerical simulation studies for the determination of the full phase diagram of short duplexes require, as an input ingredient, a simplified but reliable force-field able to capture the main features of duplex-duplex interaction. We used the coarse-grained SIRAH force field in the implicit solvent approximation to study the interaction between two short duplexes of double-strand DNA as a function of the relative positions and orientations and the salt concentration, in the cases of 8 and 20 base pairs. We discuss the consequences of our study to determine new simple but qualitatively reliable model potentials.

cond-mat.soft↗

arXiv2015

Wertheim perturbation theory: thermodynamics and structure of patchy colloids

We critically discuss the application of the Wertheim's theory to classes of complex associating fluids that can be today engineered in the laboratory as patchy colloids and to the prediction of their peculiar gas-liquid phase diagrams. Our systematic study, stemming from perturbative version of the theory, allows us to show that, even at the simplest level of approximation for the inter-cluster correlations, the theory is still able to provide a consistent and stable picture of the behavior of interesting models of self-assembling colloidal suspension. We extend the analysis of a few cases of patchy systems recently introduced in the literature. In particular, we discuss for the first time in detail the consistency of the structural description underlying the perturbative approach and we are able to prove a consistency relationship between the valence as obtained from thermodynamics and from the structure for the one-site case. A simple analytical expression for the structure factor is proposed.

cond-mat.soft↗

arXiv2014

Wertheim and Bjerrum-Tani-Henderson theories for associating fluids: a critical assessment

Two theories for associating fluids recently used to study clustering in models for self-assembling patchy particles, Wertheim's and Bjerrum-Tani-Henderson theories, are carefully compared. We show that, for a fluid allowing only for dimerization, Wertheim theory is equivalent to the Bjerrum-Tani-Henderson theory neglecting intercluster correlations. Nonetheless, while the former theory is able to account for percolation and condensation, the latter is not. For the Bjerrum-Tani-Henderson theory we also rigorously prove the uniqueness of the solution for the cluster's concentrations and the reduction of the system of equations to a single one for a single unknown. We carry out Monte Carlo simulations of two simple models of dimerizing fluids and compare quantitatively the predictions of the two theories with the simulation data.

cond-mat.stat-mech↗

arXiv2014

From square-well to Janus: Improved algorithm for integral equation theory and comparison with thermodynamic perturbation theory within the Kern-Frenkel model

Building upon past work on the phase diagram of Janus fluids [Sciortino et al., Phys. Rev. Lett. \textbf{103}, 237801 (2009)], we perform a detailed study of integral equation theory of the Kern-Frenkel potential with coverage that is tuned from the isotropic square-well fluid to the Janus limit. An improved algorithm for the reference hypernetted-chain (RHNC) equation for this problem is implemented that significantly extends the range of applicability of RHNC. Results for both structure and thermodynamics are presented and compared with numerical simulations. Unlike previous attempts, this algorithm is shown to be stable down to the Janus limit, thus paving the way for analyzing the frustration mechanism characteristic of the gas-liquid transition in the Janus system. The results are also compared with Barker-Henderson thermodynamic perturbation theory on the same model. We then discuss the pros and cons of both approaches within a unified treatment. On balance, RHNC integral equation theory, even with an isotropic hard-sphere reference system, is found to be a good compromise between accuracy of the results, computational effort, and uniform quality to tackle self-assembly processes in patchy colloids of complex nature. Further improvement in RHNC however clearly requires an \emph{anisotropic} reference bridge function.

cond-mat.soft↗

arXiv2013

Monte Carlo simulation of the nonadditive restricted primitive model of ionic fluids: Phase diagram and clustering

We report an accurate Monte Carlo calculation of the phase diagram and clustering properties of the restricted primitive model with non-additive hard-sphere diameters. At high density the positively non-additive fluid shows more clustering than the additive model and the negatively non-additive fluid shows less clustering than the additive model, at low density the reverse scenario appears. A negative nonadditivity tends to favor the formation of neutrally charged clusters starting from the dipole. A positive nonadditivity favors the pairing of like ions at high density. The critical point of the gas-liquid phase transition moves at higher temperatures and higher densities for a negative nonadditivity and at lower temperatures and lower densities for a positive nonadditivity. The law of corresponding states does not seem to hold strictly. Our results can be used to interpret recent experimental works on room temperature ionic liquids.

cond-mat.soft↗

arXiv2013

The restricted primitive model of ionic fluids with nonadditive diameters

The restricted primitive model with nonadditive hard-sphere diameters is shown to have interesting and peculiar clustering properties. We report accurate calculations of the cluster concentrations. Implementing efficient and ad hoc Monte Carlo algorithms we determine the effect of nonadditivity on both the clustering and the gas-liquid binodal. For negative nonadditivity, tending to the extreme case of completely overlapping unlike ions, the prevailing clusters are made of an even number of particles having zero total charge. For positive nonadditivity, the frustrated tendency to segregation of like particles and the reduced space available to the ions favors percolating clusters at high densities.

cond-mat.soft↗

arXiv2010

Cluster theory of Janus particles

We apply a simple statistical mechanics cluster approximation for studying clustering in the Kern and Frenkel model of Janus fluids. The approach is motivated by recent Monte Carlo simulations work on the same model revealing that the vapor coexisting with the liquid phase contains clusters of different sizes and shapes whose equilibrium concentrations in general depend on the interaction range as well as on thermodynamic parameters. The approximation hinges on a separation between the intra- and inter-cluster contribution to thermodynamics, where only the former is explicitly computed by Monte Carlo simulations. Two levels of a simple liquid theory approximation are exploited for the description of the latter. In the first we use the ideal-gas expressions and obtain a qualitative agreement with extensive Monte Carlo bulk simulations. This can be improved to a semi-quantitative agreement, by using a hard-sphere description for the cluster-cluster correlations.

cond-mat.soft↗

arXiv2010

Effective forces in square well and square shoulder fluids

We derive an analytical expression for the effective force between a pair of macrospheres immersed in a sea of microspheres, in the case where the interaction between the two unlike species is assumed to be a square well or a square shoulder of given range and depth (or height). This formula extends a similar one developed in the case of hard core interactions only. Qualitative features of such effective force and the resulting phase diagram are then analyzed in the limit of no interaction between the small particles. Approximate force profiles are then obtained by means of integral equation theories (PY and HNC) combined with the superposition approximation and compared with exact ones from direct Monte Carlo simulations.

cond-mat.stat-mech↗

arXiv2010

A numerical study of one-patch colloidal particles: from square-well to Janus

We perform numerical simulations of a simple model of one-patch colloidal particles to investigate: (i) the behavior of the gas-liquid phase diagram on moving from a spherical attractive potential to a Janus potential and (ii) the collective structure of a system of Janus particles. We show that, for the case where one of the two hemispheres is attractive and one is repulsive, the system organizes into a dispersion of orientational ordered micelles and vesicles and, at low $T$, the system can be approximated as a fluid of such clusters, interacting essentially via excluded volume. The stability of this cluster phase generates a very peculiar shape of the gas and liquid coexisting densities, with a gas coexistence density which increases on cooling, approaching the liquid coexistence density at very low $T$.

cond-mat.soft↗

arXiv2010

Effects of patch size and number within a simple model of patchy colloids

We report on a computer simulation and integral equation study of a simple model of patchy spheres, each of whose surfaces is decorated with two opposite attractive caps, as a function of the fraction $χ$ of covered attractive surface. The simple model explored --- the two-patch Kern-Frenkel model --- interpolates between a square-well and a hard-sphere potential on changing the coverage $χ$. We show that integral equation theory provides quantitative predictions in the entire explored region of temperatures and densities from the square-well limit $χ= 1.0$ down to $χ\approx 0.6$. For smaller $χ$, good numerical convergence of the equations is achieved only at temperatures larger than the gas-liquid critical point, where however integral equation theory provides a complete description of the angular dependence. These results are contrasted with those for the one-patch case. We investigate the remaining region of coverage via numerical simulation and show how the gas-liquid critical point moves to smaller densities and temperatures on decreasing $χ$. Below $χ\approx 0.3$, crystallization prevents the possibility of observing the evolution of the line of critical points, providing the angular analog of the disappearance of the liquid as an equilibrium phase on decreasing the range for spherical potentials. Finally, we show that the stable ordered phase evolves on decreasing $χ$ from a three-dimensional crystal of interconnected planes to a two-dimensional independent-planes structure to a one-dimensional fluid of chains when the one-bond-per-patch limit is eventually reached.

cond-mat.soft↗

arXiv2009

Phase diagram of Janus Particles

We deeply investigate a simple model representative of the recently synthesized Janus particles, i.e. colloidal spherical particles whose surface is divided into two areas of different chemical composition. When the two surfaces are solvophilic and solvophobic, these particles constitute the simplest example of surfactants. The phase diagram includes a colloidal-poor (gas) colloidal-rich (liquid) de-mixing region, which is progressively suppressed by the insurgence of micelles, providing the first model where micellization and phase-separation are simultaneously observed. The coexistence curve is found to be negatively sloped in the temperature-pressure plane, suggesting that Janus particles can provide a colloidal system with anomalous thermodynamic behavior.

cond-mat.soft↗

arXiv2009

Phase diagram and structural properties of a simple model for one-patch particles

We study the thermodynamic and structural properties of a simple, one-patch fluid model using the reference hypernetted-chain (RHNC) integral equation and specialized Monte Carlo simulations. In this model, the interacting particles are hard spheres, each of which carries a single identical, arbitrarily-oriented, attractive circular patch on its surface; two spheres attract via a simple square-well potential only if the two patches on the spheres face each other within a specific angular range dictated by the size of the patch. For a ratio of attractive to repulsive surface of 0.8, we construct the RHNC fluid-fluid separation curve and compare with that obtained by Gibbs ensemble and grand canonical Monte Carlo simulations. We find that RHNC provides a quick and highly reliable estimate for the position of the fluid-fluid critical line. In addition, it gives a detailed (though approximate) description of all structural properties and their dependence on patch size.

cond-mat.soft↗

arXiv2009

Liquid-vapor coexistence in square-well fluids: an RHNC study

We investigate the ability of the reference hypernetted-chain integral equation to describe the phase diagram of square-well fluids with four different ranges of attraction. Comparison of our results with simulation data shows that the theory is able to reproduce with fairly good accuracy a significant part of the coexistence curve, provided an extrapolation procedure is used to circumvent the well-known pathologies of the pseudo-spinodal line, which are more severe at reduced width of the attractive well. The method provides a useful approach for a quick assessment of the location of the liquid-vapor coexistence curve in this kind of fluid and serves as a check for the more complex problem of anisotropic "patchy" square-well molecules.

cond-mat.stat-mech↗

arXiv2007

Patchy sticky hard spheres: analytical study and Monte Carlo simulations

We consider a fluid of hard spheres bearing one or two uniform circular adhesive patches, distributed so as not to overlap. Two spheres interact via a ``sticky'' Baxter potential if the line joining the centers of the two spheres intersects a patch on each sphere, and via a hard sphere potential otherwise. We analyze the location of the fluid-fluid transition and of the percolation line as a function of the size of the patch (the fractional coverage of the sphere's surface) and of the number of patches within a virial expansion up to third order and within the first two terms (C0 and C1) of a class of closures Cn hinging on a density expansion of the direct correlation function. We find that the locations of the two lines depend sensitively on both the total adhesive coverage and its distribution. The treatment is almost fully analytical within the chosen approximate theory. We test our findings by means of specialized Monte Carlo (MC) simulations and find the main qualitative features of the critical behaviour to be well captured in spite of the low density perturbative nature of the closure. The introduction of anisotropic attractions into a model suspension of spherical particles is a first step towards a more realistic description of globular proteins in solution.

cond-mat.stat-mech↗

arXiv2005

A numerical study of a binary Yukawa model in regimes characteristic of globular proteins in solutions

The main goal of this paper is to assess the limits of validity, in the regime of low concentration and strong Coulomb coupling (high molecular charges), for a simple perturbative approximation to the radial distribution functions (RDF), based upon a low-density expansion of the potential of mean force and proposed to describe protein-protein interactions in a recent Small-Angle-Scattering (SAS) experimental study. A highly simplified Yukawa (screened Coulomb) model of monomers and dimers of a charged globular protein ($β$-lactoglobulin) in solution is considered. We test the accuracy of the RDF approximation, as a necessary complementary part of the previous experimental investigation, by comparison with the fluid structure predicted by approximate integral equations and exact Monte Carlo (MC) simulations. In the MC calculations, an Ewald construction for Yukawa potentials has been used to take into account the long-range part of the interactions in the weakly screened cases. Our results confirm that the perturbative first-order approximation is valid for this system even at strong Coulomb coupling, provided that the screening is not too weak (i.e., for Debye length smaller than monomer radius). A comparison of the MC results with integral equation calculations shows that both the hypernetted-chain (HNC) and the Percus-Yevick (PY) closures have a satisfactory behavior under these regimes, with the HNC being superior throughout. The relevance of our findings for interpreting SAS results is also discussed.

cond-mat.stat-mech↗