Searcharxiv⌕ Search

arXiv subjects

Glen A. Satten

Publications and source records attributed to Glen A. Satten.

2 recordsLinked to original sources

R-Estimation with Right-Censored Data

This paper considers the problem of directly generalizing the R-estimator under a linear model formulation with right-censored outcomes. We propose a natural generalization of the rank and corresponding estimating equation for the R-estimator in the case of the Wilcoxon (i.e., linear-in-ranks) score function, and show how it can respectively be exactly represented as members of the classes of estimating equations proposed in Ritov (1990) and Tsiatis (1990). We then establish analogous results for a large class of bounded nonlinear-in-ranks score functions. Asymptotics and variance estimation are obtained as straightforward consequences of these representation results. The self-consistent estimator of the residual distribution function, and the mid-cumulative distribution function (and, where needed, a generalization of it), play critical roles in these developments.

stat.ME↗

A Bottom-up Approach to Testing Hypotheses That Have a Branching Tree Dependence Structure, with False Discovery Rate Control

Modern statistical analyses often involve testing large numbers of hypotheses. In many situations, these hypotheses may have an underlying tree structure that not only helps determine the order that tests should be conducted but also imposes a dependency between tests that must be accounted for. Our motivating example comes from testing the association between a trait of interest and groups of microbes that have been organized into operational taxonomic units (OTUs) or amplicon sequence variants (ASVs). Given p-values from association tests for each individual OTU or ASV, we would like to know if we can declare that a certain species, genus, or higher taxonomic grouping can be considered to be associated with the trait. For this problem, a bottom-up testing algorithm that starts at the lowest level of the tree (OTUs or ASVs) and proceeds upward through successively higher taxonomic groupings (species, genus, family etc.) is required. We develop such a bottom-up testing algorithm that controls the error rate of decisions made at higher levels in the tree, conditional on findings at lower levels in the tree. We further show this algorithm controls the false discovery rate based on the global null hypothesis that no taxa are associated with the trait. By simulation, we also show that our approach is better at finding driver taxa, the highest level taxa below which there are dense association signals. We illustrate our approach using data from a study of the microbiome among patients with ulcerative colitis and healthy controls.

stat.ME↗