arXiv subjects

Gonzalo A. Ruz

Publications and source records attributed to Gonzalo A. Ruz.

13 recordsLinked to original sources

arXiv2026

Classifying Directional Trajectories Near Criticality in the Three-State Majority-Vote Model with Deep Belief Networks and Bidirectional GRUs

In this work, we investigate whether the latent representations learned by a Deep Belief Network (DBN) and a Bidirectional Gated Recurrent Unit (Bi-GRU) can discriminate among four dynamically distinct trajectory types in the three-state majority vote model (MV3): approach from disorder, approach from order, departure to disorder, and departure to order. The DBN, pre-trained in an unsupervised manner on static equilibrium samples via a Gaussian-Bernoulli Restricted Boltzmann Machine input layer and architecture $784 \to 4096 \to 225 \to 81$, encodes each lattice snapshot into an 81-dimensional latent vector. A t-SNE analysis of the DBN latent space reveals only partial separation of the four trajectory types, reflecting the fact that a model trained on static configurations cannot fully resolve directional temporal structure. A two-layer Bi-GRU classifier, trained on sequences of DBN-encoded snapshots of length $T = 50$, achieves near-perfect separation of all four trajectory types in its hidden state space, as confirmed by t-SNE visualization on both training and test sets. Furthermore, a sliding-window application of the trained Bi-GRU to continuous MV3 dynamics demonstrates its ability to sense the system's current dynamical regime in real-time. These results establish a principled hierarchical architecture for detecting and classifying critical transitions in agent-based opinion dynamics models.

cs.LG↗

arXiv2026

A Learning Algorithm for Threshold Boolean Networks with Prescribed Fixed Points

We present a learning algorithm for inferring threshold Boolean networks (TBNs) with a prescribed set of fixed points. The proposed method employs a custom differentiable loss function that jointly enforces fixed point preservation, penalizes spurious attractors, encourages binary outputs, and promotes sparsity through L1 regularization. Applied to the FOS-GRN model of Arabidopsis thaliana, the approach achieved perfect reconstruction (i.e., all 10 desired fixed points and no spurious ones) in 5 out of 30 independent runs, recovering on average 8.53 $\pm$ 0.90 correct fixed points with no spurious attractors. In contrast, standard methods such as the Perceptron and Logistic Regression recovered up to 10 fixed points but introduced between 8 and 31 spurious ones. An additional analysis varying the sparsity coefficient ($λ$) confirmed that the method's performance and the structural properties of the inferred networks remain robust within a practical range (up to 0.01) of regularization strengths. Overall, the results demonstrate the effectiveness and stability of the proposed algorithm in capturing meaningful network dynamics under prescribed dynamical constraints.

cs.LG↗

arXiv2026

Geometric Filtering of LLM-Generated Samples for Few-Shot Text Classification

Large language models (LLMs) can generate synthetic training data for text classification, but the quality of generated samples is heterogeneous: some fall in correct class regions of the embedding space while others land in peripheral or cross-class zones. We propose a geometric filtering framework that evaluates each LLM-generated sample by its Euclidean distance to real class examples in a sentence embedding space, selecting only geometrically consistent candidates. A soft weighting mechanism transforms filter scores into sample weights for classifier training. Evaluated across 13 datasets, 5 classifiers, 10 augmentation methods, and over 6,700 configurations, our method achieves +2.61 percentage points (pp) over SMOTE ($p<0.0001$, Cohen's $d=0.95$, 88.9% win rate). The approach generalizes to named entity recognition (+9.26pp, 100% win rate) without filter modification, and is robust across 5 LLMs from 4 providers. A key finding is that the simplest distance-based filter consistently outperforms complex multi-criteria alternatives.

cs.LG↗

arXiv2026

Critic-Free Deep Reinforcement Learning for Maritime Coverage Path Planning on Irregular Hexagonal Grids

Maritime surveillance missions, such as search and rescue and environmental monitoring, rely on the efficient allocation of sensing assets over vast and geometrically complex areas. Traditional Coverage Path Planning (CPP) approaches depend on decomposition techniques that struggle with irregular coastlines, islands, and exclusion zones, or require computationally expensive re-planning for every instance. We propose a Deep Reinforcement Learning (DRL) framework to solve CPP on hexagonal grid representations of irregular maritime areas. Unlike conventional methods, we formulate the problem as a neural combinatorial optimization task where a Transformer-based pointer policy autoregressively constructs coverage tours. To overcome the instability of value estimation in long-horizon routing problems, we implement a critic-free Group-Relative Policy Optimization (GRPO) scheme. This method estimates advantages through within-instance comparisons of sampled trajectories rather than relying on a value function. Experiments on 1,000 unseen synthetic maritime environments demonstrate that a trained policy achieves a 99.1% Hamiltonian success rate, more than double the best heuristic (46.0%), while producing paths 7% shorter and up to 24.1% fewer heading changes than the closest heuristic baseline. All three inference modes (greedy, stochastic sampling, and sampling with 2-opt refinement) operate under 50 ms per instance on a laptop GPU, confirming feasibility for real-time onboard deployment.

cs.LG↗

arXiv2026

Continuous surrogates versus threshold Boolean networks for modeling Arabidopsis ISR gene regulation

Gene regulatory network modeling often requires balancing predictive accuracy and mechanistic interpretability. In this work, we compare continuous surrogate models and a discrete mechanistic model on the same \textit{Arabidopsis thaliana} induced systemic resistance (ISR) dataset, using both the raw continuous gene-expression measurements and their sign-binarized representation. The study considers eight defense-related genes measured over nine time points and evaluates two continuous predictors, Random Forest (RF) regression and a Multi-Layer Perceptron (MLP), against a threshold Boolean network (TBN). The models are assessed using rolling-origin one-step prediction, recursive multi-step rollout, and interpretability analysis. RF achieved the best average one-step numerical performance in the continuous domain, with an MAE of 1.910 and an RMSE of 2.836, compared with 2.089 and 3.106 for the MLP. In the binary domain, the TBN obtained the best average one-step qualitative performance, with a binary accuracy of 0.550 and a Hamming distance of 3.600, compared with 0.500 and 4.000 for RF, and 0.495 and 4.040 for the MLP. In recursive rollout, the TBN exactly reproduced the observed binarized trajectory, while the MLP also showed near-perfect fidelity, with a trajectory binary accuracy of 0.986, and RF accumulated substantially larger deviation, with a trajectory binary accuracy of 0.708. These results highlight that local numerical accuracy and global qualitative dynamical fidelity are not necessarily aligned, and suggest that continuous surrogates and threshold Boolean networks should be viewed as complementary tools for modeling biological regulation.

q-bio.MN↗

arXiv2026

Exploration of the generative capabilities of Boltzmann machines applied to social systems under the majority rule

We study the generative capabilities of Boltzmann machines to recover systems governed by the majority rule under critical conditions. To this end, we train deep belief networks (DBNs) with different configurations, where the first layer can use Gaussian visible units with more than two states (i.e., non-binary units). We then allow the DBN to "dream" samples conditioned on visible units that we keep fixed, and we measure the deviation of this dreamed system from the real one. We also corroborate, using a discrete thermometer based on a convolutional network, that the reconstructions remain in a critical state. Across several training sessions with different architectures, we show that, despite the complexity of the problem, the DBN can recover samples that remain critical even under input noise, with a gradual degradation of physical observables relative to the original sample.

cs.LG↗

arXiv2026

Baseline-Free Policy Optimization for Neural Combinatorial Optimization

Neural combinatorial optimization (NCO) trains autoregressive policies to solve routing problems. The standard training algorithm, REINFORCE with a rollout baseline, requires maintaining and periodically updating a frozen copy of the policy for variance reduction. This baseline introduces a structural vulnerability: on harder instances, a poor baseline produces noisy gradient estimates that can destabilize training. We evaluate Group Relative Policy Optimization (GRPO), an algorithm from large language model alignment that eliminates the baseline entirely by normalizing advantages within groups of sampled trajectories. In a controlled comparison of five RL algorithms on TSP and CVRP benchmarks within the RL4CO framework, we find that: (i) GRPO avoids the training collapse observed with REINFORCE on TSP-100, where performance degrades from cost 9.8 to 52.1 immediately after the warmup phase and does not recover under extended training; (ii) at matched gradient updates, GRPO achieves solution quality within 2% of POMO, a strong AM-based multi-start baseline, while requiring no external baseline; and (iii) P3O, a pairwise preference algorithm also from the alignment literature, is competitive on TSP but shows higher variability on CVRP. These results identify GRPO as a promising baseline-free alternative for NCO, particularly in settings where baseline-dependent training becomes fragile.

cs.LG↗

arXiv2026

Benchmarking Classical Coverage Path Planning Heuristics on Irregular Hexagonal Grids for Maritime Coverage Scenarios

Coverage path planning on irregular hexagonal grids is relevant to maritime surveillance, search and rescue and environmental monitoring, yet classical methods are often compared on small ad hoc examples or on rectangular grids. This paper presents a reproducible benchmark of deterministic single-vehicle coverage path planning heuristics on irregular hexagonal graphs derived from synthetic but maritime-motivated areas of interest. The benchmark contains 10,000 Hamiltonian-feasible instances spanning compact, elongated, and irregular morphologies, 17 heuristics from seven families, and a common evaluation protocol covering Hamiltonian success, complete-coverage success, revisits, path length, heading changes, and CPU latency. Across the released dataset, heuristics with explicit shortest-path reconnection solve the relaxed coverage task reliably but almost never produce zero-revisit tours. Exact Depth-First Search confirms that every released instance is Hamiltonian-feasible. The strongest classical Hamiltonian baseline is a Warnsdorff variant that uses an index-based tie-break together with a terminal-inclusive residual-degree policy, reaching 79.0% Hamiltonian success. The dominant design choice is not tie-breaking alone, but how the residual degree is defined when the endpoint is reserved until the final move. This shows that underreported implementation details can materially affect performance on sparse geometric graphs with bottlenecks. The benchmark is intended as a controlled testbed for heuristic analysis rather than as a claim of operational optimality at fleet scale.

cs.RO↗

arXiv2025

ProfileXAI: User-Adaptive Explainable AI

ProfileXAI is a model- and domain-agnostic framework that couples post-hoc explainers (SHAP, LIME, Anchor) with retrieval - augmented LLMs to produce explanations for different types of users. The system indexes a multimodal knowledge base, selects an explainer per instance via quantitative criteria, and generates grounded narratives with chat-enabled prompting. On Heart Disease and Thyroid Cancer datasets, we evaluate fidelity, robustness, parsimony, token use, and perceived quality. No explainer dominates: LIME achieves the best fidelity-robustness trade-off (Infidelity $\le 0.30$, $L<0.7$ on Heart Disease); Anchor yields the sparsest, low-token rules; SHAP attains the highest satisfaction ($\bar{x}=4.1$). Profile conditioning stabilizes tokens ($σ\le 13\%$) and maintains positive ratings across profiles ($\bar{x}\ge 3.7$, with domain experts at $3.77$), enabling efficient and trustworthy explanations.

cs.AI↗

arXiv2024

Physics-informed neural networks for operator equations with stochastic data

We consider the computation of statistical moments to operator equations with stochastic data. We remark that application of PINNs -- referred to as TPINNs -- allows to solve the induced tensor operator equations under minimal changes of existing PINNs code, and enabling handling of non-linear and time-dependent operators. We propose two types of architectures, referred to as vanilla and multi-output TPINNs, and investigate their benefits and limitations. Exhaustive numerical experiments are performed; demonstrating applicability and performance; raising a variety of new promising research avenues.

cs.LG↗

arXiv2023

h-analysis and data-parallel physics-informed neural networks

We explore the data-parallel acceleration of physics-informed machine learning (PIML) schemes, with a focus on physics-informed neural networks (PINNs) for multiple graphics processing units (GPUs) architectures. In order to develop scale-robust and high-throughput PIML models for sophisticated applications which may require a large number of training points (e.g., involving complex and high-dimensional domains, non-linear operators or multi-physics), we detail a novel protocol based on $h$-analysis and data-parallel acceleration through the Horovod training framework. The protocol is backed by new convergence bounds for the generalization error and the train-test gap. We show that the acceleration is straightforward to implement, does not compromise training, and proves to be highly efficient and controllable, paving the way towards generic scale-robust PIML. Extensive numerical experiments with increasing complexity illustrate its robustness and consistency, offering a wide range of possibilities for real-world simulations.

cs.CE↗

arXiv2023

Hyper-parameter tuning of physics-informed neural networks: Application to Helmholtz problems

We consider physics-informed neural networks (PINNs) [Raissi et al., J.~Comput. Phys. 278 (2019) 686-707] for forward physical problems. In order to find optimal PINNs configuration, we introduce a hyper-parameter optimization (HPO) procedure via Gaussian processes-based Bayesian optimization. We apply the HPO to Helmholtz equation for bounded domains and conduct a thorough study, focusing on: (i) performance, (ii) the collocation points density $r$ and (iii) the frequency $κ$, confirming the applicability and necessity of the method. Numerical experiments are performed in two and three dimensions, including comparison to finite element methods.

math.NA↗

arXiv2022

Attractor landscapes in Boolean networks with firing memory

In this paper we study the dynamical behavior of Boolean networks with firing memory, namely Boolean networks whose vertices are updated synchronously depending on their proper Boolean local transition functions so that each vertex remains at its firing state a finite number of steps. We prove in particular that these networks have the same computational power than the classical ones, ie any Boolean network with firing memory composed of $m$ vertices can be simulated by a Boolean network by adding vertices. We also prove general results on specific classes of networks. For instance, we show that the existence of at least one delay greater than 1 in disjunctive networks makes such networks have only fixed points as attractors. Moreover, for arbitrary networks composed of two vertices, we characterize the delay phase space, \ie the delay values such that networks admits limit cycles or fixed points. Finally, we analyze two classical biological models by introducing delays: the model of the immune control of the $λ$-phage and that of the genetic control of the floral morphogenesis of the plant \emph{Arabidopsis thaliana}.

cs.DM↗