arXiv subjects

Grzegorz Korcyl

Publications and source records attributed to Grzegorz Korcyl.

At least 19 recordsLinked to original sources

arXiv2026

First-in-human quantum entanglement imaging

Annihilation photons are quantum-entangled in polarization, a phenomenon that has not been exploited in medical diagnostics so far. We present the first in vivo imaging of the degree of quantum entanglement of photons originating from positron-electron annihilation within a human subject. This study utilized the Jagiellonian Positron Emission Tomography (J-PET) scanner, constructed from plastic scintillators. In plastics, annihilation photons interact primarily via the Compton effect, which provides simultaneous information regarding the photon interaction position and time, as well as the photon polarization plane. The patient was injected with a DOTA-TATE radiopharmaceutical labeled with the $^{68}$Ga radionuclide. Using the J-PET scanner, we determined the image of the radiopharmaceutical uptake and, simultaneously, the image of the degree of quantum entanglement. The latter was determined from the relative angle between the polarization planes of the annihilation photons. The values of the degree of quantum entanglement extracted for the liver and the spleen are smaller than those predicted for maximally entangled two-photon states, yet larger than expected for separable photons. This demonstration opens new perspectives for the application of quantum entanglement in clinical diagnostics.

physics.med-ph↗

arXiv2026

First Positronium Lifetime Imaging using $^{52}$Mn and $^{55}$Co with a plastic-based PET scanner

Positronium Lifetime Imaging (PLI) extends positron emission tomography by using the lifetime of positronium atoms as a probe of tissue molecular architecture. In this work, we report the first PLI measurements performed with $^{52}$Mn and $^{55}$Co using the modular J-PET. Four samples were studied in each experiment: two Certified Reference Materials (polycarbonate and fused silica) and two human tissues (cardiac myxoma and adipose). The selection of PLI events was based on the registration of two 511~keV annihilation photons and one prompt gamma in triple coincidence. From the resulting lifetime spectra we extracted the mean ortho-positronium lifetime $τ_{\text{oPs}}$ and the mean positron lifetime $ΔT_{\text{mean}}$ for each sample. The measured values of $τ_{\text{oPs}}$ in polycarbonate using both isotopes matches well with the certified reference values. Furthermore, $^{55}$Co reproduced identical results for fused-silica measurements at their respective uncertainty levels. In contrast, measurements with $^{52}$Mn in fused silica show a minor deviation, which could be caused by the Parafilm spacer. In myxoma and adipose tissue, the reduced $τ_{\text{oPs}}$ values are mainly linked to the long storage history of the samples rather than to the choice of isotope. Comparing peak-to-background ratios and spectral purity, $^{55}$Co provides cleaner PLI data under the same experimental conditions. Although $^{52}$Mn offers a longer half-life and a multi gamma cascade enhancing $β^{+}$ + $γ$ coincidences, but at the expense of higher background. In this study, we demonstrate that the applied selection criteria on the data measured with the modular J-PET can be used for PLI studies even with radionuclides with complex decay patterns.

physics.med-ph↗

arXiv2026

First ex-vivo positronium imaging of tissues with modular J-PET scanner using $^{44}$Sc radionuclide

This study presents the first ex-vivo positronium imaging of human tissues using the modular J-PET scanner with the $^{44}$Sc radionuclide. The $^{44}$Sc isotope was produced via the $^{44}$Ca(p, n)$^{44}$Sc nuclear reaction and used to perform positronium imaging of phantom composed of human adipose tissue, cardiac myxoma tissue, thrombi blood clot, and also porous polymer XAD4, and a certified reference material (CRM) made from fused silica. The experiment demonstrates the suitability of $^{44}$Sc as a positron source for positronium imaging. The performance of J-PET for positronium imaging with $^{44}$Sc was validated by proper reconstruction of the mean orthopositronium lifetime for CRM material and XAD-4 polymer. The mean ortho-positronium (oPs) lifetimes determined for adipose tissue, cardiac myxoma tissues and thrombi were consistent with results of previous experiments. The study highlights the potential $^{44}$Sc radionuclide for positronium lifetime imaging (PLI).

physics.med-ph↗

arXiv2026

Feasibility study of the positronium lifetime imaging with the Biograph Vision Quadra and J-PET tomographs

Background: After its first ex-vivo and in-vivo demonstration, Positronium Lifetime Imaging (PLI) has received considerable interest as a potential new diagnostic biomarker. High sensitivity Positron Emission Tomography (PET) systems are needed for PLI since it requires simultaneous registration of annihilation photons and prompt gamma. In this simulation-based study, a~feasibility of PLI with the long axial field-of-view Biograph Vision Quadra (Quadra) and the Total Body J-PET scanner was investigated. Methods: The study was performed using the GATE software. Background radiation, present within the Quadra tomograph, was added to the simulation. First, the optimal placement of the energy window for the registration of the prompt gamma was investigated. Next, the organ-wise sensitivity of Quadra was calculated for the $^{68}$Ga, $^{44}$Sc, $^{22}$Na and $^{124}$I radioisotopes. Finally, the sensitivity for the scandium isotope was compared to the sensitivities obtainable with the Total Body J-PET scanner, as well as with the modular J-PET prototype. Results: The PLI sensitivities for the Quadra with the background radiation are estimated to 9.22(3), 10.46(4), 5.91(3), and 15.39(4) cps/kBq for the $^{44}$Sc, $^{68}$Ga, $^{22}$Na and $^{124}$I radioisotopes, respectively. The highest sensitivity was obtained when the energy window for the deexcitation photon is adjacent to the energy window for the annihilation photons. The determined PLI sensitivities with Quadra and the Total Body J-PET are in the order of sensitivities of standard PET imaging with the short axial field-of-view ($\sim$20 cm) PET scanners. Conclusion: The organ-wise PLI sensitivity of Quadra has been computed for the $^{68}$Ga, $^{44}$Sc, $^{22}$Na and $^{124}$I radioisotopes. A sensitivity gain by a factor of 150 was estimated relative to the modular J-PET system previously used for the first in-vivo PLI.

physics.med-ph↗

arXiv2025

First positronium imaging using $^{44}$Sc with the J-PET scanner: a case study on the NEMA-Image Quality phantom

Positronium Lifetime Imaging (PLI), an emerging extension of conventional positron emission tomography (PET) imaging, offers a novel window for probing the submolecular properties of biological tissues by imaging the mean lifetime of the positronium atom. Currently, the method is under rapid development in terms of reconstruction and detection systems. Recently, the first in vivo PLI of the human brain was performed using the J-PET scanner utilizing the $^{68}$Ga isotope. However, this isotope has limitations due to its comparatively low prompt gamma yields, which is crucial for positronium lifetime measurement. Among alternative radionuclides, $^{44}$Sc stands out as a promising isotope for PLI, characterized by a clinically suitable half-life (4.04 hours) emitting 1157 keV prompt gamma in 100% cases after the emission of the positron. This study reports the first experimental demonstration of PLI with $^{44}$Sc, carried out on a NEMA-Image Quality (IQ) phantom using the Modular J-PET tomograph-the first plastic scintillators-based PET scanner.

physics.med-ph↗

arXiv2025

Realistic Total-Body J-PET Geometry Optimization -- Monte Carlo Study

Total-Body PET is one of the most promising medical diagnostics modalities. The high sensitivity provided by Total-Body technology can be advantageous for novel tomography methods like positronium imaging. Several efforts are ongoing to lower the price of the TB-PET systems. Among the alternatives, the Jagiellonian PET (J-PET) technology, based on plastic scintillator strips, offers a low-cost alternative. The work aimed to compare five Total-Body J-PET geometries as a possible next generation J-PET scanner design. We present comparative studies of performance characteristics of the cost-effective Total-Body PET scanners using J-PET technology. We investigated in silico five Total-Body scanner geometries. Monte Carlo simulations of the XCAT phantom, the 2-meter sensitivity line source and positronium sensitivity phantoms were performed. We compared the sensitivity profiles for 2-gamma and 3-gamma tomography, relative cost of the setups and performed quantitative analysis of the reconstructed images. The analysis of the reconstructed XCAT images reveals the superiority of the seven-ring scanners over the three-ring setups. However, the three-ring scanners would be approximately 2-3 times cheaper. The peak sensitivity values for two-gamma vary from 20 to 34 cps/kBq. The sensitivity curves for the positronium tomography have a similar shape to the two-gamma sensitivity profiles. The peak values are lower compared to the two-gamma cases, from about 20-28 times, with a maximum of 1.66 cps/kBq. The results show the feasibility of multi-organ imaging of all the systems to be considered for the next generation of TB J-PET designs. The relative cost for all the scanners is about 10-4 times lower compared to the cost of the uExplorer. These properties coupled together with J-PET cost-effectiveness, make the J-PET technology an attractive solution for broad application in clinics.

physics.med-ph↗

arXiv2024

Discrete symmetries tested at 10$^{-4}$ precision using linear polarization of photons from positronium annihilations

Discrete symmetries play an important role in particle physics with violation of CP connected to the matter-antimatter imbalance in the Universe. We report the most precise test of P, T and CP invariance in decays of ortho-positronium, performed with methodology involving polarization of photons from these decays. Positronium, the simplest bound state of an electron and positron, is of recent interest with discrepancies reported between measured hyperfine energy structure and theory at the level of $10^{-4}$ signaling a need for better understanding of the positronium system at this level. We test discrete symmetries using photon polarizations determined via Compton scattering in the dedicated J-PET tomograph on an event-by-event basis and without the need to control the spin of the positronium with an external magnetic field, in contrast to previous experiments. Our result is consistent with QED expectations at the level of 0.0007 and one standard deviation.

hep-ph↗

arXiv2023

Comparative studies of the sensitivities of sparse and full geometries of Total-Body PET scanners built from crystals and plastic scintillators

Background: Total-Body imaging offers high sensitivity, single-bed position, and low dose, but high construction costs limit worldwide utilization. This study compares existing and developing tomographs using plastic scintillators via simulations to propose a cost-efficient Total-Body PET scanner. Methods: Simulations of eight uEXPLORER tomographs with different scintillator materials, axial field-of-view, and detector configuration, and eight J-PET scanners with various field-of-view, plastic scintillator cross-sections, and layers were performed. Biograph Vision was also simulated. Two types of simulations were conducted with a central source and a water-filled phantom. Results: BGO crystal-based scanners showed the best sensitivity (350 cps/kBq at the center). Sparse geometry or LYSO crystals reduced sensitivity. J-PET design showed similar sensitivity to sparse LYSO detectors, with full body coverage and additional gain for brain imaging. Conclusion: The J-PET tomography system using plastic scintillators could be a cost-efficient alternative for Total-Body PET scanners, overcoming high construction costs while maintaining sensitivity

physics.med-ph↗

arXiv2023

Feasibility of the J-PET to monitor range of therapeutic proton beams

Objective: The aim of this work is to investigate the feasibility of the Jagiellonian Positron Emission Tomography (J-PET) scanner for intra-treatment proton beam range monitoring. Approach: The Monte Carlo simulation studies with GATE and PET image reconstruction with CASToR were performed in order to compare six J-PET scanner geometries (three dual-heads and three cylindrical). We simulated proton irradiation of a PMMA phantom with a Single Pencil Beam (SPB) and Spread-Out Bragg Peak (SOBP) of various ranges. The sensitivity and precision of each scanner were calculated, and considering the setup's cost-effectiveness, we indicated potentially optimal geometries for the J-PET scanner prototype dedicated to the proton beam range assessment. Main results: The investigations indicate that the double-layer cylindrical and triple-layer double-head configurations are the most promising for clinical application. We found that the scanner sensitivity is of the order of 10$^{-5}$ coincidences per primary proton, while the precision of the range assessment for both SPB and SOBP irradiation plans was found below 1 mm. Among the scanners with the same number of detector modules, the best results are found for the triple-layer dual-head geometry. Significance: We performed simulation studies demonstrating that the feasibility of the J-PET detector for PET-based proton beam therapy range monitoring is possible with reasonable sensitivity and precision enabling its pre-clinical tests in the clinical proton therapy environment. Considering the sensitivity, precision and cost-effectiveness, the double-layer cylindrical and triple-layer dual-head J-PET geometry configurations seem promising for the future clinical application. Experimental tests are needed to confirm these findings.

physics.med-ph↗

arXiv2021

Positronium imaging with the novel multiphoton PET scanner

In vivo assessment of cancer and precise location of altered tissues at initial stages of molecular disorders are important diagnostic challenges. Positronium is copiously formed in the free molecular spaces in the patient's body during positron emission tomography (PET). The positronium properties vary according to the size of inter- and intramolecular voids and the concentration of molecules in them such as, e.g., molecular oxygen, O2; therefore, positronium imaging may provide information about disease progression during the initial stages of molecular alterations. Current PET systems do not allow acquisition of positronium images. This study presents a new method that enables positronium imaging by simultaneous registration of annihilation photons and deexcitation photons from pharmaceuticals labeled with radionuclides. The first positronium imaging of a phantom built from cardiac myxoma and adipose tissue is demonstrated. It is anticipated that positronium imaging will substantially enhance the specificity of PET diagnostics.

physics.med-ph↗

arXiv2021

Testing CPT symmetry in ortho-positronium decays with positronium annihilation tomography

Charged lepton system symmetry under combined charge, parity, and time-reversal transformation (CPT) remains scarcely tested. Despite stringent quantum-electrodynamic limits, discrepancies in predictions for the electron-positron bound state (positronium atom) motivate further investigation, including fundamental symmetry tests. While CPT noninvariance effects could be manifested in non-vanishing angular correlations between final-state photons and spin of annihilating positronium, measurements were previously limited by knowledge of the latter. Here, we demonstrate tomographic reconstruction techniques applied to three-photon annihilations of ortho-positronium atoms to estimate their spin polarisation without magnetic field or polarised positronium source. We use a plastic-scintillator-based positron-emission-tomography scanner to record ortho-positronium (o-Ps) annihilations with single-event estimation of o-Ps spin and determine the complete spectrum of an angular correlation operator sensitive to CPT-violating effects. We find no violation at the precision level of 10^{-4}, with an over threefold improvement on the previous measurement.

nucl-ex↗

arXiv2021

Implementation of the conjugate gradient algorithm for heterogeneous systems

Lattice QCD calculations require significant computational effort, with the dominant fraction of resources typically spent in the numerical inversion of the Dirac operator. One of the simplest methods to solve such large and sparse linear systems is the conjugate gradient (CG) approach. In this work we present an implementation of CG that can be executed on different devices, including CPUs, GPUs, and FPGAs. This is achieved by using the SYCL/DPC++ framework, which allows the execution of the same source code on heterogeneous systems.

hep-lat↗

arXiv2021

Evaluation of $SU(3)$ smearing on FPGA accelerator cards

Recent FPGA accelerator cards promise large acceleration factors for some specific computational tasks. In the context of Lattice QCD calculations, we investigate the possible gain of moving the $SU(3)$ gauge field smearing routine to such accelerators. We study Xilinx Alveo U280 cards and use the associated Vitis high-level synthesis framework. We discuss the possible pros and cons of such a solution based on the gathered benchmarks.

hep-lat↗

arXiv2020

J-PET Framework: Software platform for PET tomography data reconstruction and analysis

J-PET Framework is an open-source software platform for data analysis, written in C++ and based on the ROOT package. It provides a common environment for implementation of reconstruction, calibration and filtering procedures, as well as for user-level analyses of Positron Emission Tomography data. The library contains a set of building blocks that can be combined by users with even little programming experience, into chains of processing tasks through a convenient, simple and well-documented API. The generic input-output interface allows processing the data from various sources: low-level data from the tomography acquisition system or from diagnostic setups such as digital oscilloscopes, as well as high-level tomography structures e.g. sinograms or a list of lines-of-response. Moreover, the environment can be interfaced with Monte Carlo simulation packages such as GEANT and GATE, which are commonly used in the medical scientific community.

physics.ins-det↗

arXiv2019

Towards Lattice Quantum Chromodynamics on FPGA devices

In this paper we describe a single-node, double precision Field Programmable Gate Array (FPGA) implementation of the Conjugate Gradient algorithm in the context of Lattice Quantum Chromodynamics. As a benchmark of our proposal we invert numerically the Dirac-Wilson operator on a 4-dimensional grid on three Xilinx hardware solutions: Zynq Ultrascale+ evaluation board, the Alveo U250 accelerator and the largest device available on the market, the VU13P device. In our implementation we separate software/hardware parts in such a way that the entire multiplication by the Dirac operator is performed in hardware, and the rest of the algorithm runs on the host. We find out that the FPGA implementation can offer a performance comparable with that obtained using current CPU or Intel's many core Xeon Phi accelerators. A possible multiple node FPGA-based system is discussed and we argue that power-efficient High Performance Computing (HPC) systems can be implemented using FPGA devices only.

cs.DC↗

arXiv2018

Implementation of the conjugate gradient algorithm on FPGA devices

Results of porting parts of the Lattice Quantum Chromodynamics code to modern FPGA devices are presented. A single-node, double precision implementation of the Conjugate Gradient algorithm is used to invert numerically the Dirac-Wilson operator on a 4-dimensional grid on a Xilinx Zynq evaluation board. The code is divided into two software/hardware parts in such a way that the entire multiplication by the Dirac operator is performed in programmable logic, and the rest of the algorithm runs on the ARM cores. Optimized data blocks are used to efficiently use data movement infrastructure allowing to reach intervals of 1 clock cycle. We show that the FPGA implementation can offer a comparable performance compared to that obtained using Intel Xeon Phi KNL.

hep-lat↗

arXiv2018

Estimating the NEMA characteristics of the J-PET tomograph using the GATE package

The novel whole-body PET system based on plastic scintillators is developed by the {J-PET} Collaboration. It consists of plastic scintillator strips arranged axially in the form of a cylinder, allowing the cost-effective construction of the total-body PET. In order to determine properties of the scanner prototype and optimize its geometry, advanced computer simulations using the GATE software were performed. The spatial resolution, the sensitivity, the scatter fraction and the noise equivalent count rate were estimated according to the NEMA norm as a function of the length of the tomograph, number of the detection layers, diameter of the tomographic chamber and for various types of the applied readout. For the single-layer geometry with the diameter of 85 cm, strip length of 100 cm, cross-section of 4 mm x 20 mm and silicon photomultipliers with the additional layer of wavelength shifter as the readout, the spatial resolution (FWHM) in the centre of the scanner is equal to 3 mm (radial, tangential) and 6 mm (axial). For the analogous double-layer geometry with the same readout, diameter and scintillator length, with the strip cross-section of 7 mm x 20 mm, the NECR peak of 300 kcps was reached at 40 kBq/cc activity concentration, the scatter fraction is estimated to about 35% and the sensitivity at the centre amounts to 14.9 cps/kBq. Sensitivity profiles were also determined.

physics.ins-det↗

arXiv2015

Designing dedicated data compression for physics experiments within FPGA already used for data acquisition

Physics experiments produce enormous amount of raw data, counted in petabytes per day. Hence, there is large effort to reduce this amount, mainly by using some filters. The situation can be improved by additionally applying some data compression techniques: removing redundancy and optimally encoding the actual information. Preferably, both filtering and data compression should fit in FPGA already used for data acquisition - reducing requirements of both data storage and networking architecture. We will briefly explain and discuss some basic techniques, for a better focus applied to design a dedicated data compression system basing on a sample data from a prototype of a tracking detector: 10000 events for 48 channels. We will focus on the time data here, which after neglecting the headers and applying data filtering, requires on average 1170 bits/event using the current coding. Encoding relative times (differences) and grouping data by channels, reduces this number to 798 bits/channel, still using fixed length coding: a fixed number of bits used for a given value. Using variable length Huffman coding to encode numbers of digital pulses for a channel and the most significant bits of values (simple binning) reduces further this number to 552 bits/event. Using adaptive binning: denser for frequent values, and an accurate entropy coder we get further down to 455 bits/event - this option can easily fit unused resources of FPGA currently used for data acquisition. Finally, using separate probability distributions for different channels, what could be done by a software compressor, leads to 437bits/event, what is 2.67 times less than the original 1170 bits/event.

cs.IT↗