arXiv subjects

Guénolé Silvestre

Publications and source records attributed to Guénolé Silvestre.

15 recordsLinked to original sources

arXiv2026

Radiomics--Foundation Fusion for Interpretable RCC Classification: Internal Benchmarking and Exploratory External Transfer

Accurate preoperative subtype classification of renal cell carcinoma (RCC) from contrast-enhanced CT remains clinically challenging because clear cell RCC (ccRCC) and non-clear cell RCC often show overlapping imaging appearances. This study evaluates whether foundation representations reduce reliance on handcrafted radiomics, or whether radiomics remains complementary for interpretable tumour characterisation. We compared radiomics, conventional CNN features, MedicalNet-pretrained features, MedVAE representations, and fusion variants for binary ccRCC classification on KiTS23, reporting area under the receiver operating characteristic curve (AUC) with bootstrap confidence intervals and average precision (AP) as a complementary class-imbalance-sensitive metric. We further assessed branch-removal ablation, TCGA/AIMI external transfer, and interpretability using radiomics permutation importance and gate-level analysis. Internally, 3D MedVAE gated fusion achieved the best performance, with an AUC of 82.7% and AP of 92.2%. On the external TCGA cohort, the same model achieved an AUC of 79.5% and AP of 98.9%, although specificity remains uncertain because only two external non-ccRCC cases were available. Gate analysis showed a radiomics-dominant fusion regime, suggesting that foundation representations acted as case-dependent refinement signals rather than replacements for structured tumour descriptors. These findings support radiomics as a complementary and clinically interpretable component of CT-based RCC characterisation in the foundation-model era.

cs.CV↗

arXiv2026

Efficient Ultrasound Image Segmentation with Token-Conditioned Neural Cellular Automata

Point-of-Care Ultrasound (POCUS) plays an important role in bedside diagnosis and clinical decision-making, particularly in resource-constrained settings. Recent deep learning methods have substantially improved ultrasound image segmentation, enabling accurate diagnosis and biometric estimation. However, their computational cost limits deployment on portable and low-resource devices. To address this challenge, we propose LiteAdaNCA-Net (LANCANet), a lightweight ultrasound segmentation framework that incorporates token-conditioned Neural Cellular Automata (NCA) adapters for iterative feature refinement. Specifically, structure-aware tokens guide local NCA refinement via Token FiLM, enabling boundary-aware feature refinement with minimal computational cost. We evaluate LANCANet on HC18, CCA, and PSFHS, and assess robustness on two independent African fetal head datasets collected from multiple clinical centers. Experimental results demonstrate that LANCANet achieves competitive or superior performance to recent lightweight CNN- and transformer-based methods. On HC18 and CCA, LANCANet achieves the highest Dice Similarity Coefficient (DSC) of 96.62\% and 92.86\%, respectively. On PSFHS, it achieves the best performance on the challenging pubic symphysis structure while maintaining competitive fetal head segmentation accuracy. Furthermore, despite being trained from scratch, LANCANet maintains competitive performance on the external KEN-FH and AFR-FH datasets under substantial domain shifts. These results show that token-conditioned NCA refinement improves segmentation accuracy and boundary localization while maintaining computational efficiency for resource-constrained clinical deployment. Our code is on \href{https://anonymous.4open.science/r/LANCAN-21A0/README.md}{GitHub}.

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arXiv2026

Dual Agreement Consistency Learning for Semi-Supervised Fetal Ultrasound Segmentation

Maternal-fetal US is the primary imaging modality for monitoring fetal development, yet accurate automated segmentation remains challenging due to the scarcity of pixel-level annotations. To address this issue, we propose DACL, a semi-supervised framework for robust fetal US image segmentation. DACL jointly trains a deployment-oriented lightweight convolutional network (1.47\thinsp\mathrm{M} parameters) and a Transformer-based network, leveraging labeled data for supervised learning and unlabeled data via CPS. To enhance prediction stability, we introduce a dual-agreement consistency loss that couples pixel-wise probabilistic divergence with entropy-guided confidence alignment. Unlike conventional CPS methods that enforce agreement only at the prediction level, DACL explicitly regularizes both distributional alignment and uncertainty, thereby suppressing unreliable pseudo-labels and enabling stable cross-architecture pseudo-label learning under extreme annotation scarcity. Furthermore, an interpolation-based consistency strategy using mixup is applied to unlabeled samples to enhance robustness. Under 5% labeled data, DACL improves Dice by up to 2.77% and reduces HD95 by up to 14.69 mm compared with the strongest recent semi-supervised methods, demonstrating significant improvements in boundary accuracy on both fetal head and abdomen datasets. These results demonstrate the effectiveness of agreement-based consistency learning for annotation-efficient fetal US segmentation. Our code is on GitHub.

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arXiv2026

A Clinician-Centered Pipeline for Annotation and Evaluation in Ultrasound AI Studies

Clinician-centered evaluation is critical for validating medical AI systems, especially in ultrasound imaging where quantitative metrics do not always capture clinical usability. Existing medical image platforms primarily focus on dataset labeling. They lack integrated support for blinded model comparison and reproducible evaluation workflows. We present a clinician-centered pipeline for remote annotation and evaluation in ultrasound AI studies. The proposed pipeline uses a centralized server and lightweight browser interfaces to enable clinicians to perform annotation, blinded ranking, and review without local dataset downloads. The pipeline also supports multi-rater participation, centralized result aggregation, and automated statistical analysis. We validate the pipeline in a fetal ultrasound segmentation study with six raters spanning expert, generalist, and non-expert experience levels. The system automatically generated Spearman correlation, Kendall's $τ$, and top-1 selection statistics. Results indicated moderate to strong agreement across experts and other groups. The blinded evaluation results showed a tendency for later active learning models to be preferred. These outcomes suggest that the pipeline can support clinician-centered annotation and reproducible human-\ac{AI} evaluation studies in ultrasound imaging. The proposed pipeline is available on \href{https://github.com/13204942/SonoRate}{GitHub}.

cs.HC↗

arXiv2026

Understanding Task Aggregation for Generalizable Ultrasound Foundation Models

Foundation models promise to unify multiple clinical tasks within a single framework, but recent ultrasound studies report that unified models can underperform task-specific baselines. We hypothesize that this degradation arises not from model capacity limitations, but from task aggregation strategies that ignore interactions between task heterogeneity and available training data scale. In this work, we systematically analyze when heterogeneous ultrasound tasks can be jointly learned without performance loss, establishing practical criteria for task aggregation in unified clinical imaging models. We introduce M2DINO, a multi-organ, multi-task framework built on DINOv3 with task-conditioned Mixture-of-Experts blocks for adaptive capacity allocation. We systematically evaluate 27 ultrasound tasks spanning segmentation, classification, detection, and regression under three paradigms: task-specific, clinically-grouped, and all-task unified training. Our results show that aggregation effectiveness depends strongly on training data scale. While clinically-grouped training can improve performance in data-rich settings, it may induce substantial negative transfer in low-data settings. In contrast, all-task unified training exhibits more consistent performance across clinical groups. We further observe that task sensitivity varies by task type in our experiments: segmentation shows the largest performance drops compared with regression and classification. These findings provide practical guidance for ultrasound foundation models, emphasizing that aggregation strategies should jointly consider training data availability and task characteristics rather than relying on clinical taxonomy alone.

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arXiv2026

Dual Agreement Consistency Learning with Foundation Models for Semi-Supervised Fetal Heart Ultrasound Segmentation and Diagnosis

Congenital heart disease (CHD) screening from fetal echocardiography requires accurate analysis of multiple standard cardiac views, yet developing reliable artificial intelligence models remains challenging due to limited annotations and variable image quality. In this work, we propose FM-DACL, a semi-supervised Dual Agreement Consistency Learning framework for the FETUS 2026 challenge on fetal heart ultrasound segmentation and diagnosis. The method combines a pretrained ultrasound foundation model (EchoCare) with a convolutional network through heterogeneous co-training and an exponential moving average teacher to better exploit unlabeled data. Experiments on the multi-center challenge dataset show that FM-DACL achieves a Dice score of 59.66 and NSD of 42.82 using heterogeneous backbones, demonstrating the feasibility of the proposed semi-supervised framework. These results suggest that FM-DACL provides a flexible approach for leveraging heterogeneous models in low-annotation fetal cardiac ultrasound analysis. The code is available on https://github.com/13204942/FM-DACL.

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arXiv2026

Entropy-Guided Agreement-Diversity: A Semi-Supervised Active Learning Framework for Fetal Head Segmentation in Ultrasound

Fetal ultrasound (US) data is often limited due to privacy and regulatory restrictions, posing challenges for training deep learning (DL) models. While semi-supervised learning (SSL) is commonly used for fetal US image analysis, existing SSL methods typically rely on random limited selection, which can lead to suboptimal model performance by overfitting to homogeneous labeled data. To address this, we propose a two-stage Active Learning (AL) sampler, Entropy-Guided Agreement-Diversity (EGAD), for fetal head segmentation. Our method first selects the most uncertain samples using predictive entropy, and then refines the final selection using the agreement-diversity score combining cosine similarity and mutual information. Additionally, our SSL framework employs a consistency learning strategy with feature downsampling to further enhance segmentation performance. In experiments, SSL-EGAD achieves an average Dice score of 94.57\% and 96.32\% on two public datasets for fetal head segmentation, using 5\% and 10\% labeled data for training, respectively. Our method outperforms current SSL models and showcases consistent robustness across diverse pregnancy stage data. The code is available on \href{https://github.com/13204942/Semi-supervised-EGAD}{GitHub}.

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arXiv2025

Leveraging Information Divergence for Robust Semi-Supervised Fetal Ultrasound Image Segmentation

Maternal-fetal Ultrasound is the primary modality for monitoring fetal development, yet automated segmentation remains challenging due to the scarcity of high-quality annotations. To address this limitation, we propose a semi-supervised learning framework that leverages information divergence for robust fetal ultrasound segmentation. Our method employs a lightweight convolutional network (1.47M parameters) and a Transformer-based network, trained jointly with labelled data through standard supervision and with unlabelled data via cross-supervision. To encourage consistent and confident predictions, we introduce an information divergence loss that combines per-pixel Kullback-Leibler divergence and Mutual Information Gap, effectively reducing prediction disagreement between the two models. In addition, we apply mixup on unlabelled samples to further enhance robustness. Experiments on two fetal ultrasound datasets demonstrate that our approach consistently outperforms seven state-of-the-art semi-supervised methods. When only 5% of training data is labelled, our framework improves the Dice score by 2.39%, reduces the 95% Hausdorff distance by 14.90, and decreases the Average Surface Distance by 4.18. These results highlight the effectiveness of leveraging information divergence for annotation-efficient and robust medical image segmentation. Our code is publicly available on GitHub.

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arXiv2025

Diffusion Model-based Data Augmentation Method for Fetal Head Ultrasound Segmentation

Medical image data is less accessible than in other domains due to privacy and regulatory constraints. In addition, labeling requires costly, time-intensive manual image annotation by clinical experts. To overcome these challenges, synthetic medical data generation offers a promising solution. Generative AI (GenAI), employing generative deep learning models, has proven effective at producing realistic synthetic images. This study proposes a novel mask-guided GenAI approach using diffusion models to generate synthetic fetal head ultrasound images paired with segmentation masks. These synthetic pairs augment real datasets for supervised fine-tuning of the Segment Anything Model (SAM). Our results show that the synthetic data captures real image features effectively, and this approach reaches state-of-the-art fetal head segmentation, especially when trained with a limited number of real image-mask pairs. In particular, the segmentation reaches Dice Scores of 94.66\% and 94.38\% using a handful of ultrasound images from the Spanish and African cohorts, respectively. Our code, models, and data are available on GitHub.

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arXiv2025

Fusing Radiomic Features with Deep Representations for Gestational Age Estimation in Fetal Ultrasound Images

Accurate gestational age (GA) estimation, ideally through fetal ultrasound measurement, is a crucial aspect of providing excellent antenatal care. However, deriving GA from manual fetal biometric measurements depends on the operator and is time-consuming. Hence, automatic computer-assisted methods are demanded in clinical practice. In this paper, we present a novel feature fusion framework to estimate GA using fetal ultrasound images without any measurement information. We adopt a deep learning model to extract deep representations from ultrasound images. We extract radiomic features to reveal patterns and characteristics of fetal brain growth. To harness the interpretability of radiomics in medical imaging analysis, we estimate GA by fusing radiomic features and deep representations. Our framework estimates GA with a mean absolute error of 8.0 days across three trimesters, outperforming current machine learning-based methods at these gestational ages. Experimental results demonstrate the robustness of our framework across different populations in diverse geographical regions. Our code is publicly available on \href{https://github.com/13204942/RadiomicsImageFusion_FetalUS}.

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arXiv2025

Semi-supervised Cervical Segmentation on Ultrasound by A Dual Framework for Neural Networks

Accurate segmentation of ultrasound (US) images of the cervical muscles is crucial for precision healthcare. The demand for automatic computer-assisted methods is high. However, the scarcity of labeled data hinders the development of these methods. Advanced semi-supervised learning approaches have displayed promise in overcoming this challenge by utilizing labeled and unlabeled data. This study introduces a novel semi-supervised learning (SSL) framework that integrates dual neural networks. This SSL framework utilizes both networks to generate pseudo-labels and cross-supervise each other at the pixel level. Additionally, a self-supervised contrastive learning strategy is introduced, which employs a pair of deep representations to enhance feature learning capabilities, particularly on unlabeled data. Our framework demonstrates competitive performance in cervical segmentation tasks. Our codes are publicly available on https://github.com/13204942/SSL\_Cervical\_Segmentation.

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arXiv2024

PSFHS Challenge Report: Pubic Symphysis and Fetal Head Segmentation from Intrapartum Ultrasound Images

Segmentation of the fetal and maternal structures, particularly intrapartum ultrasound imaging as advocated by the International Society of Ultrasound in Obstetrics and Gynecology (ISUOG) for monitoring labor progression, is a crucial first step for quantitative diagnosis and clinical decision-making. This requires specialized analysis by obstetrics professionals, in a task that i) is highly time- and cost-consuming and ii) often yields inconsistent results. The utility of automatic segmentation algorithms for biometry has been proven, though existing results remain suboptimal. To push forward advancements in this area, the Grand Challenge on Pubic Symphysis-Fetal Head Segmentation (PSFHS) was held alongside the 26th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2023). This challenge aimed to enhance the development of automatic segmentation algorithms at an international scale, providing the largest dataset to date with 5,101 intrapartum ultrasound images collected from two ultrasound machines across three hospitals from two institutions. The scientific community's enthusiastic participation led to the selection of the top 8 out of 179 entries from 193 registrants in the initial phase to proceed to the competition's second stage. These algorithms have elevated the state-of-the-art in automatic PSFHS from intrapartum ultrasound images. A thorough analysis of the results pinpointed ongoing challenges in the field and outlined recommendations for future work. The top solutions and the complete dataset remain publicly available, fostering further advancements in automatic segmentation and biometry for intrapartum ultrasound imaging.

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arXiv2024

Evaluate Fine-tuning Strategies for Fetal Head Ultrasound Image Segmentation with U-Net

Fetal head segmentation is a crucial step in measuring the fetal head circumference (HC) during gestation, an important biometric in obstetrics for monitoring fetal growth. However, manual biometry generation is time-consuming and results in inconsistent accuracy. To address this issue, convolutional neural network (CNN) models have been utilized to improve the efficiency of medical biometry. But training a CNN network from scratch is a challenging task, we proposed a Transfer Learning (TL) method. Our approach involves fine-tuning (FT) a U-Net network with a lightweight MobileNet as the encoder to perform segmentation on a set of fetal head ultrasound (US) images with limited effort. This method addresses the challenges associated with training a CNN network from scratch. It suggests that our proposed FT strategy yields segmentation performance that is comparable when trained with a reduced number of parameters by 85.8%. And our proposed FT strategy outperforms other strategies with smaller trainable parameter sizes below 4.4 million. Thus, we contend that it can serve as a dependable FT approach for reducing the size of models in medical image analysis. Our key findings highlight the importance of the balance between model performance and size in developing Artificial Intelligence (AI) applications by TL methods. Code is available at https://github.com/13204942/FT_Methods_for_Fetal_Head_Segmentation.

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arXiv2024

Generative Diffusion Model Bootstraps Zero-shot Classification of Fetal Ultrasound Images In Underrepresented African Populations

Developing robust deep learning models for fetal ultrasound image analysis requires comprehensive, high-quality datasets to effectively learn informative data representations within the domain. However, the scarcity of labelled ultrasound images poses substantial challenges, especially in low-resource settings. To tackle this challenge, we leverage synthetic data to enhance the generalizability of deep learning models. This study proposes a diffusion-based method, Fetal Ultrasound LoRA (FU-LoRA), which involves fine-tuning latent diffusion models using the LoRA technique to generate synthetic fetal ultrasound images. These synthetic images are integrated into a hybrid dataset that combines real-world and synthetic images to improve the performance of zero-shot classifiers in low-resource settings. Our experimental results on fetal ultrasound images from African cohorts demonstrate that FU-LoRA outperforms the baseline method by a 13.73% increase in zero-shot classification accuracy. Furthermore, FU-LoRA achieves the highest accuracy of 82.40%, the highest F-score of 86.54%, and the highest AUC of 89.78%. It demonstrates that the FU-LoRA method is effective in the zero-shot classification of fetal ultrasound images in low-resource settings. Our code and data are publicly accessible on https://github.com/13204942/FU-LoRA.

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arXiv2024

Segmenting Fetal Head with Efficient Fine-tuning Strategies in Low-resource Settings: an empirical study with U-Net

Accurate measurement of fetal head circumference is crucial for estimating fetal growth during routine prenatal screening. Prior to measurement, it is necessary to accurately identify and segment the region of interest, specifically the fetal head, in ultrasound images. Recent advancements in deep learning techniques have shown significant progress in segmenting the fetal head using encoder-decoder models. Among these models, U-Net has become a standard approach for accurate segmentation. However, training an encoder-decoder model can be a time-consuming process that demands substantial computational resources. Moreover, fine-tuning these models is particularly challenging when there is a limited amount of data available. There are still no "best-practice" guidelines for optimal fine-tuning of U-net for fetal ultrasound image segmentation. This work summarizes existing fine-tuning strategies with various backbone architectures, model components, and fine-tuning strategies across ultrasound data from Netherlands, Spain, Malawi, Egypt and Algeria. Our study shows that (1) fine-tuning U-Net leads to better performance than training from scratch, (2) fine-tuning strategies in decoder are superior to other strategies, (3) network architecture with less number of parameters can achieve similar or better performance. We also demonstrate the effectiveness of fine-tuning strategies in low-resource settings and further expand our experiments into few-shot learning. Lastly, we publicly released our code and specific fine-tuned weights.

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