arXiv subjects

Hadi Zadeh-Haghighi

Publications and source records attributed to Hadi Zadeh-Haghighi.

At least 19 recordsLinked to original sources

arXiv2026

Single-Spin Nitrogen-Vacancy Hybrid Magnetometer with Enhanced Static Field Sensitivity

Precision sensing and imaging of weak static magnetic fields are crucial for a variety of emerging nanoscale applications. While nitrogen-vacancy (NV) centers in diamond provide exceptional AC magnetic field sensitivity with nanoscale spatial resolution, their sensitivity to static (DC) magnetic fields is fundamentally limited by the short dephasing time (T2*) due to spin-spin interactions. In this work, we present a novel hybrid sensing approach that integrates a soft ferromagnetic microwire with a single near-surface NV center to amplify its response to external static magnetic fields. This hybrid configuration achieves a DC magnetic field sensitivity of 63 nT/sqrt(Hz) for a single NV center - about 500 times greater than conventional inhomogeneous broadening- or T2*-limited magnetometry, with potential for further enhancement. The compact and highly sensitive nature of this sensor opens new opportunities for quantum sensing applications involving the detection of static or slowly varying magnetic fields across diverse scientific and technological domains.

quant-ph↗

arXiv2026

Magnetosensitivity of amphibian morphological pigmentation is light- and eye-dependent and consistent with the radical pair mechanism

Weak magnetic fields influence a wide range of biological processes, yet the underlying mechanisms are poorly understood. The radical pair mechanism (RPM), which involves quantum spin dynamics, is a leading hypothesis. Here we show that weak magnetic fields modulate morphological pigmentation -- specifically, the number of perioptic melanophores -- in Xenopus laevis tadpoles in a field-strength-dependent manner. The response is light- and eye-dependent. The observed field-strength dependence is quantitatively consistent with a radical pair model. These properties are reminiscent of the light-dependent magnetoreception that is thought to operate in migratory birds, and establish amphibian pigmentation as a tractable vertebrate system for the study of radical-pair quantum biology.

physics.bio-ph↗

arXiv2026

The Role of Entanglement in Quantum Reservoir Computing with Coupled Kerr Nonlinear Oscillators

Quantum Reservoir Computing (QRC) uses quantum dynamics to efficiently process temporal data. In this work, we investigate a QRC framework based on two coupled Kerr nonlinear oscillators, a system well-suited for time-series prediction tasks due to its complex nonlinear interactions and potentially high-dimensional state space. We explore how its performance in forecasting both linear and nonlinear time-series depends on key physical parameters: input drive strength, Kerr nonlinearity, and oscillator coupling, and analyze the role of entanglement in improving the reservoir's computational performance, focusing on its effect on predicting non-trivial time series. Using logarithmic negativity to quantify entanglement and normalized root mean square error (NRMSE) to evaluate predictive accuracy, individual parameter sweeps show that optimal performance occurs at moderate but non-zero entanglement. Furthermore, an aggregated binned analysis reveals that this moderate entanglement is consistently associated with the optimal average predictive performance across the parameter space, an observation that persists up to a threshold in the input frequency. This relationship persists under some levels of dissipation and dephasing. In particular, we find that higher dissipation rates can enhance performance. These findings contribute to the broader understanding of quantum reservoirs for high performance, efficient quantum machine learning and time-series forecasting.

quant-ph↗

arXiv2025

Magnetic Field-dependent Isotope Effect Supports Radical Pair Mechanism in Tubulin Polymerization

Weak magnetic fields and isotopes have been shown to influence biological processes; however, the underlying mechanisms remain poorly understood, particularly because the corresponding interaction energies are far below thermal energies, making classical explanations challenging or impossible. Microtubules, dynamic cytoskeletal fibers, offer an ideal system to test weak magnetic field effects due to their self-assembling capabilities, sensitivity to magnetic fields, and their central role in cellular processes. In this study, we use a combination of experiments and simulations to explore how nuclear spin dynamics affect microtubule polymerization by examining interactions between magnesium isotope substitution and weak magnetic fields. Our experiments reveal an isotope-dependent effect, which can be explained via a radical pair mechanism, explicitly arising from nuclear spin properties rather than isotopic mass differences. This nuclear spin-driven isotope effect is notably enhanced under an applied weak magnetic field of approximately 3 mT. Our theoretical model based on radical pairs achieves quantitative agreement with our experimental observations. These results establish a direct connection between quantum spin dynamics and microtubule assembly, providing new insights into how weak magnetic fields influence cellular and biomolecular functions.

physics.bio-ph↗

arXiv2024

Quantum Active Learning for Structural Determination of Doped Nanoparticles -- a Case Study of 4Al@Si$_{11}$

Active learning (AL) has been widely applied in chemistry and materials science. In this work we propose a quantum active learning (QAL) method for automatic structural determination of doped nanoparticles, where quantum machine learning (QML) models for regression are used iteratively to indicate new structures to be calculated by DFT or DFTB and this new data acquisition is used to retrain the QML models. The QAL method is implemented in the Quantum Machine Learning Software/Agent for Material Design and Discovery (QMLMaterial), whose aim is using an artificial agent (defined by QML regression algorithms) that chooses the next doped configuration to be calculated that has a higher probability of finding the optimum structure. The QAL uses a quantum Gaussian process with a fidelity quantum kernel as well as the projected quantum kernel and different quantum circuits. For comparison, classical AL was used with a classical Gaussian process with different classical kernels. The presented QAL method was applied in the structural determination of doped Si$_{11}$ with 4 Al (4Al@Si$_{11}$) and the results indicate the QAL method is able to find the optimum 4Al@Si$_{11}$ structure. The aim of this work is to present the QAL method -- formulated in a noise-free quantum computing framework -- for automatic structural determination of doped nanoparticles and materials defects.

quant-ph↗

arXiv2024

Master equation-based model for infrared-based magnetometry with nitrogen-vacancy centers in diamond cavities: a path to sub-picotesla sensitivity at sub-millimeter scales

Our study aims to increase the spatial resolution of high-sensitivity magnetometry based on singlet-transition infrared (IR) absorption using nitrogen-vacancy (NV) centers in diamonds in monolithic cavities, with potential applications in bio-magnetic field detection. We develop a master-equation treatment of optically detected magnetic resonance, incorporating IR light saturation effects. This master equation provides the singlet population, which is then utilized to calculate the reflectivity and ultimately derive the magnetic field sensitivity taking into account photon and spin shot noise. We further show that our model is compatible with experiments of IR-based NV center magnetometry. Through optimization in a high-parameter space, we uncover the potential to achieve sensitivities in the order of sub-pico tesla, even for sub-millimeter scales.

quant-ph↗

arXiv2024

Frequency- and dissipation-dependent entanglement advantage in spin-network Quantum Reservoir Computing

We study the performance of an Ising spin network for quantum reservoir computing (QRC) in linear and non-linear memory tasks. We investigate the extent to which quantumness enhances performance by monitoring the behaviour of quantum entanglement, which we quantify by the partial transpose of the density matrix. In the most general case where the effects of dissipation are incorporated, our results indicate that the strength of the entanglement advantage depends on the frequency of the input signal; the benefit of entanglement is greater with more rapidly fluctuating signals, whereas a low-frequency input is better suited to a non-entangled reservoir. This may be understood as a condition for an entanglement advantage to manifest itself: the system's quantum memory must survive for long enough for the temporal structure of the input signal to reveal itself. We also find that quantum entanglement empowers a spin-network quantum reservoir to remember a greater number of temporal features.

quant-ph↗

arXiv2024

Exploring Quantum Active Learning for Materials Design and Discovery

The meeting of artificial intelligence (AI) and quantum computing is already a reality; quantum machine learning (QML) promises the design of better regression models. In this work, we extend our previous studies of materials discovery using classical active learning (AL), which showed remarkable economy of data, to explore the use of quantum algorithms within the AL framework (QAL) as implemented in the MLChem4D and QMLMaterials codes. The proposed QAL uses quantum support vector regressor (QSVR) or a quantum Gaussian process regressor (QGPR) with various quantum kernels and different feature maps. Data sets include perovskite properties (piezoelectric coefficient, band gap, energy storage) and the structure optimization of a doped nanoparticle (3Al@Si11) chosen to compare with classical AL results. Our results revealed that the QAL method improved the searches in most cases, but not all, seemingly correlated with the roughness of the data. QAL has the potential of finding optimum solutions, within chemical space, in materials science and elsewhere in chemistry.

quant-ph↗

arXiv2024

The Radical Pair Mechanism Cannot Explain Telecommunication Frequency Effects on Reactive Oxygen Species

In order to investigate whether the radical pair mechanism (RPM) can explain the effects of telecommunication frequency radiation on reactive oxygen species production, we modelled the effects of oscillating magnetic fields on radical pair systems. Our analysis indicates that the RPM cannot account for the biological effects observed under exposure to telecommunication frequencies due to negligible effects under low-amplitude conditions used in experimental setups. Observable effects on radical pairs at these frequencies would require hyperfine coupling constants that are precisely fine-tuned to large values that far exceed those naturally occurring within biological systems. We conclude that some other mechanism must be responsible for the effects of telecommunication frequency fields in biological systems.

physics.bio-ph↗

arXiv2024

Quantum theory of a potential biological magnetic field sensor: radical pair mechanism in flavin adenine dinucleotide biradicals

Recent studies in vitro and in vivo suggest that flavin adenine dinucleotide (FAD) on its own might be able to act as a biological magnetic field sensor. Motivated by these observations, in this study, we develop a detailed quantum theoretical model for the radical pair mechanism (RPM) for the flavin adenine biradical within the FAD molecule. We perform molecular dynamics simulations to determine the distance between the radicals on FAD, which we then feed into a quantum master equation treatment of the RPM. In contrast to previous semi-classical models which are limited to the low-field and high-field cases, our quantum model can predict the full magnetic field dependence of the transient absorption signal. Our model's predictions are consistent with experiments.

physics.bio-ph↗

arXiv2024

Quantumness and Learning Performance in Reservoir Computing with a Single Oscillator

We explore the power of reservoir computing with a single oscillator in learning time series using quantum and classical models. We demonstrate that this scheme learns the Mackey--Glass (MG) chaotic time series, a solution to a delay differential equation. Our results suggest that the quantum nonlinear model is more effective in terms of learning performance compared to a classical non-linear oscillator. We develop approaches for measuring the quantumness of the reservoir during the process, proving that Lee-Jeong's measure of macroscopicity is a non-classicality measure. We note that the evaluation of the Lee-Jeong measure is computationally more efficient than the Wigner negativity. Exploring the relationship between quantumness and performance by examining a broad range of initial states and varying hyperparameters, we observe that quantumness in some cases improves the learning performance. However, our investigation reveals that an indiscriminate increase in quantumness does not consistently lead to improved outcomes, necessitating caution in its application. We discuss this phenomenon and attempt to identify conditions under which a high quantumness results in improved performance.

quant-ph↗

arXiv2023

Radical pairs and superoxide amplification can explain magnetic field effects on planarian regeneration

Weak magnetic field exposure can affect many biological processes across a wide range of living organisms. Recently, it has been observed that weak magnetic fields can modulate reactive oxygen species (ROS) concentration, affecting regeneration in planaria. These effects show unusual nonlinear dependence on magnetic field strength, including a sign change. In another study by the same group, superoxide is identified as the particular ROS being modulated. We propose a radical pair mechanism based on a flavin-superoxide radical pair to explain the modulation of superoxide production and its effect on planarian regeneration. The results of our calculations favor a triplet-born radical pair. Our yield calculations can reproduce the observed magnetic field dependence, including the sign change. Moreover, to explain the size of the effect on ROS concentration, we suggest a simple amplification model inspired by known biochemical mechanisms and lay out the conditions for such a model to work. Further, we also make empirical predictions concerning the hypomagnetic field effects on planarian regeneration.

physics.bio-ph↗

arXiv2023

Radical Pair Model for Magnetic Field Effects on NMDA Receptor Activity

The N-methyl-D-aspartate receptor is a prominent player in brain development and functioning. Perturbations to its functioning through external stimuli like magnetic fields can potentially affect the brain in numerous ways. Various studies have shown that magnetic fields of varying strengths affect these receptors. We propose that the radical pair mechanism, a quantum mechanical process, could explain some of these field effects. Radicals of the form $[\mbox{RO}^\bullet \mbox{ Mg($\mbox{H}_2$O$)_n$}^{+\bullet}]$, where R is a protein residue that can be Serine or Tyrosine, are considered for this study. The variation in the singlet fractional yield of the radical pairs, as a function of magnetic field strength, is calculated to understand how the magnetic field affects the products of the radical pair reactions. Based on the results, the radical pair mechanism is a likely candidate for explaining the magnetic field effects observed on the receptor activity. The model predicts changes in the behaviour of the system as magnetic field strength is varied and also predicts certain isotope effects. The results further suggest that similar effects on radical pairs could be a plausible explanation for various magnetic field effects within the brain.

physics.bio-ph↗

arXiv2023

Optical polarization evolution and transmission in multi-Ranvier-node axonal myelin-sheath waveguides

In neuroscience, it is of interest to consider all possible modes of information transfer between neurons in order to fully understand processing in the brain. It has been suggested that photonic communication may be possible along axonal connections, especially through the myelin sheath as a waveguide, due to its high refractive index. There is already a good deal of theoretical and experimental evidence for light guidance in the myelin sheath; however, the question of how the polarization of light is transmitted remains largely unexplored. It is presently unclear whether polarization-encoded information could be preserved within the myelin sheath. We simulate guided mode propagation through a myelinated axon structure with multiple Ranvier nodes. This allows both to observe polarization change and to test the assumption of exponentiated transmission loss through multiple Ranvier nodes for guided light in myelin sheath waveguides. We find that the polarization can be well preserved through multiple nodes and that transmission losses through multiple nodes are approximately multiplicative. These results provide an important context for the hypothesis of neural information transmission facilitated by biophotons, strengthening the possibility of both classical and quantum photonic communication within the brain.

physics.bio-ph↗

arXiv2023

Magnetic isotope effects: a potential testing ground for quantum biology

One possible explanation for magnetosensing in biology, such as avian magnetoreception, is based on the spin dynamics of certain chemical reactions that involve radical pairs. Radical pairs have been suggested to also play a role in anesthesia, hyperactivity, neurogenesis, circadian clock rhythm, microtubule assembly, etc. It thus seems critical to probe the credibility of such models. One way to do so is through isotope effects with different nuclear spins. Here we briefly review the papers involving spin-related isotope effects in biology. We suggest studying isotope effects can be an interesting avenue for quantum biology.

physics.bio-ph↗

arXiv2023

Hypomagnetic field effects as a potential avenue for testing the radical pair mechanism in biology

Near-zero magnetic fields, called hypomagnetic fields, are known to impact biological phenomena, including developmental processes, the circadian system, neuronal and brain activities, DNA methylation, calcium balance in cells, and many more. However, the exact mechanism underlying such effects is still elusive, as the corresponding energies are far smaller than thermal energies. It is known that chemical reactions involving radical pairs can be magnetic field dependent at very low intensities comparable to or less than the geomagnetic field. Here, we review in detail hypomagnetic field effects from the perspective of the radical pair mechanism, pointing out that under certain conditions, they can be comparable or even stronger than the effects of increasing the magnetic field. We suggest that hypomagnetic field effects are an interesting avenue for testing the radical pair mechanism in biology.

quant-ph↗

arXiv2022

A first-principles calculation of electron-phonon interactions for the $\text{C}_2\text{C}_\text{N}$ and $\text{V}_\text{N}\text{N}_\text{B}$ defects in hexagonal boron nitride

Quantum emitters in two-dimensional hexagonal boron nitride (h-BN) have generated significant interest due to observations of ultra-bright emission made at room temperature. The expectation that solid-state emitters exhibit broad zero-phonon lines at elevated temperatures has been put in question by recent observations of Fourier transform (FT) limited photons emitted from h-BN flakes at room temperature. The mechanism responsible for the narrow lines has been suggested to be a mechanical decoupling from in-plane phonons due to an out-of-plane distortion of the emitter's orbitals. All decoupled emitters produce photons that are directed in-plane, suggesting that the dipoles are oriented perpendicular to the h-BN plane. Motivated by the promise of an efficient and scalable source of indistinguishable photons that can operate at room temperature, we have developed an approach using density functional theory (DFT) to determine the electron-phonon coupling for defects that have in- and out-of-plane transition dipole moments. Our DFT calculations reveal that the $\text{C}_2 \text{C}_\text{N}$ defect has an in-plane transition dipole moment, and that of the $\text{V}_\text{N} \text{N}_\text{B}$ defect is perpendicular to the plane. We exploit the two-dimensional framework recently implemented in \texttt{QUANTUM ESPRESSO} to determine both the phonon density of states and the electron-phonon matrix elements associated with the h-BN defective structures. We find no indication that an out-of-plane transition dipole is sufficient to obtain FT-limited photons at room temperature. Our work also provides direction to future DFT software developments and adds to the growing list of calculations relevant to researchers in the field of solid-state quantum information processing.

cond-mat.mtrl-sci↗

arXiv2022

Magnetic field effects in biology from the perspective of the radical pair mechanism

A large and growing body of research shows that weak magnetic fields can significantly influence various biological systems, including plants, animals, and humans. However, the underlying mechanisms behind these phenomena remain elusive. It is remarkable that the magnetic energies implicated in these effects are much smaller than thermal energies. Here we review these observations, of which there are now hundreds, and we suggest that a viable explanation is provided by the radical pair mechanism, which involves the quantum dynamics of the electron and nuclear spins of naturally occurring transient radical molecules. While the radical pair mechanism has been studied in detail in the context of avian magnetoreception, the studies reviewed here show that magnetosensitivity is widespread throughout biology. We review magnetic field effects on various physiological functions, organizing them based on the type of the applied magnetic fields, namely static, hypomagnetic, and oscillating magnetic fields, as well as isotope effects. We then review the radical pair mechanism as a potential unifying model for the described magnetic field effects, and we discuss plausible candidate molecules that might constitute the radical pairs. We review recent studies proposing that the quantum nature of the radical pairs provides promising explanations for xenon anesthesia, lithium effects on hyperactivity, magnetic field and lithium effects on the circadian clock, and hypomagnetic field effects on neurogenesis and microtubule assembly. We conclude by discussing future lines of investigation in this exciting new area of quantum biology related to weak magnetic field effects.

physics.bio-ph↗