SearcharxivSearch

arXiv subjects

Haiyang Qian

Publications and source records attributed to Haiyang Qian.

4 recordsLinked to original sources

MedStruct-S: A Benchmark for Key Discovery, Key-Conditioned QA and Semi-Structured Extraction from OCR Clinical Reports

Semi-structured information extraction (IE) from OCR-derived clinical reports is crucial for efficiently reconstructing patients' longitudinal medical histories. In practice, this scenario commonly involves three tasks: (i) field-header (key) discovery, (ii) key-conditioned question answering (QA), and (iii) end-to-end key-value pair extraction. However, existing evaluations often under-model two factors: heterogeneous and incompletely known key representations, and OCR-induced noise. This makes it difficult to assess model robustness in real-world settings. We present MedStruct-S, a benchmark specifically designed to evaluate these tasks under unknown keys and OCR noise. MedStruct-S contains 3,582 annotated real-world clinical report pages. Using MedStruct-S, we benchmark two representative paradigms: encoder-only sequence labeling with post-processing and decoder-only structured generation, covering four encoder-only and five decoder-only models spanning 0.11B to 103B parameters. Our results show that encoder-only models achieve the best performance for non-null-value key-conditioned QA despite being substantially smaller than decoder-only models. When comparing models of similar order of magnitude, encoder-only models still perform better overall. Without controlling for model scale, fine-tuned decoder-only models deliver the strongest overall results. These findings show that the benchmark provides a reliable and practical basis for selecting and comparing models across different semi-structured IE settings.

cs.CL

Key Coverage Matters: Semi-Structured Extraction of OCR Clinical Reports

Clinical reports are often fragmented across healthcare institutions because privacy regulations and data silos limit direct information sharing. When patients seek care at a different hospital, they often carry paper or scanned reports from prior visits. This hinders EHR integration and longitudinal review, and downstream applications that depend on more complete patient records, such as patient management, follow-up care, real-world studies, and clinical-trial matching. Although OCR can digitize such reports, reliable extraction remains challenging because clinical documents are heterogeneous, OCR text is noisy, and many healthcare settings require low-cost on-premise deployment. We formulate this problem as canonical key-conditioned extractive question answering over OCR-derived clinical reports. Because the key fields are neither fixed nor known in advance, the key space is open. We maintain a canonical key inventory through iterative key mining, normalization, clustering, and lightweight human verification, and introduce key coverage as a metric to quantify inventory completeness. Using a 0.2B BERT-based model, experiments on real-world reports from more than 20 hospitals show performance improves monotonically with key coverage. The model achieves F1 scores of 0.839 and 0.893 under exact match and boundary-tolerant matching, respectively, once the Top-90 canonical keys are covered. These results show that key coverage is a dominant factor for end-to-end performance. At Top-90 coverage, our model outperforms a fine-tuned Qwen3-0.6B baseline under exact match. Although our annotated corpus is Chinese, the method relies on the language-agnostic key-value organization of semi-structured clinical reports and can be adapted to other settings given an appropriate canonical key inventory and alias mapping.

cs.CL

HydroAgent: Formalizing Forecaster Expertise into Skill-Orchestrated Flood Forecasting Workflows

Operational flood forecasting depends on tacit forecaster expertise that is difficult to formalize, audit, and transfer. Although artificial intelligence methods have advanced flood prediction and model-error correction, most existing studies have not explicitly represented the tacit expert rules, review checkpoints, and workflow constraints that connect model outputs to operational warning decisions. To address this issue, we propose HydroAgent, a skill-orchestrated agent framework that embeds Large Language Models (LLMs) into a model-driven flood forecasting workflow, where each skill encodes explicit rules to bound LLM reasoning. We validated its effectiveness using five state-of-the-art LLMs in the South Yamhill River basin. Our results demonstrate that prior judgment captures observed peak flow and flood volume within 5% tolerance in 10 and 11 out of 14 events, with 5-fold cross-validation over 129 events yielding Pearson correlations of 0.62 and 0.84. Building on a high-baseline scheme library (average KGE 0.890), the guided scheme selection further improves KGE by 0.023-0.154, with simulated peak flow and flood volume falling within the prior judgment ranges for 14 and 13 out of 14 events. All five tested LLMs successfully execute the HydroAgent workflow with comparable judgment accuracy (40%-80%), while showing moderate performance variation and substantial cost differences. HydroAgent does not aim to replace human forecasters; instead, it translates their tacit expertise into an auditable and reproducible workflow, streamlining analytical steps and supporting more informed decision-making. This skill-orchestrated paradigm demonstrates how explicit rule boundaries can guide language model reasoning to complement physically based simulation in next-generation flood forecasting.

physics.geo-ph

Energy-Aware Aggregation of Dynamic Temporal Workload in Data Centers

Data center providers seek to minimize their total cost of ownership (TCO), while power consumption has become a social concern. We present formulations to minimize server energy consumption and server cost under three different data center server setups (homogeneous, heterogeneous, and hybrid hetero-homogeneous clusters) with dynamic temporal workload. Our studies show that the homogeneous model significantly differs from the heterogeneous model in computational time (by an order of magnitude). To be able to compute optimal configurations in near real-time for large scale data centers, we propose two modes, aggregation by maximum and aggregation by mean. In addition, we propose two aggregation methods, static (periodic) aggregation and dynamic (aperiodic) aggregation. We found that in the aggregation by maximum mode, the dynamic aggregation resulted in cost savings of up to approximately 18% over the static aggregation. In the aggregation by mean mode, the dynamic aggregation by mean could save up to approximately 50% workload rearrangement compared to the static aggregation by mean mode. Overall, our methodology helps to understand the trade-off in energy-aware aggregation.

cs.DC