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Hangjie Ji

Publications and source records attributed to Hangjie Ji.

At least 19 recordsLinked to original sources

Energetic variational formulation for electrohydrodynamics of surfactant-laden droplets

The coupling between surfactant-laden droplet dynamics and electric fields plays an important role in liquid-handling technologies such as digital microfluidics. We develop an energetic variational framework for the coupled electrohydrodynamics of surfactant-laden droplets, incorporating two-phase Stokes flow, insoluble surfactant transport on a moving interface, and electrostatic effects. Based on Onsager's principle, the governing equations are derived by minimizing the Rayleighian, defined as the sum of the rate of change of the free energy and the dissipation functional, subject to the incompressibility constraint. This formulation simultaneously yields the Stokes equations in each bulk phase, the interfacial stress-balance condition incorporating Marangoni and Maxwell stresses, the electrostatic equation, the surface transport equation for the surfactant concentration, and the moving contact-line dynamics. By replacing the viscous dissipation functional with Rayleigh dissipation, we further derive a reduced model describing the evolution of surfactant-laden droplets driven by motion by mean curvature. For sessile droplets represented as graph surfaces, the model reduces to a one-dimensional coupled electrohydrodynamic model for the liquid height, surfactant concentration, and electrostatic potential. A first-order implicit-explicit numerical scheme is proposed for the reduced system, and numerical results illustrate the coupled effects of surfactant transport and electric fields on driving droplet deformation and migration.

physics.flu-dyn

Optimal Sensor Placement in Gaussian Processes via Column Subset Selection

Gaussian process regression uses data measured at sensor locations to reconstruct a spatially dependent function with quantified uncertainty. However, if only a limited number of sensors can be deployed, it is important to determine how to optimally place the sensors to minimize a measure of the uncertainty in the reconstruction. We consider the Bayesian D-optimal criterion to determine the optimal sensor locations by choosing sensors from a candidate set of sensors. Since this is an NP-hard problem, our approach models sensor placement as a column subset selection problem (CSSP) on the covariance matrix, computed using the kernel function on the candidate sensor points. We propose an algorithm that uses the Golub-Klema-Stewart framework (GKS) to select sensors and provide an analysis of lower bounds on the D-optimality of these sensor placements. To reduce the computational cost in the GKS step, we propose and analyze algorithms for the D-optimal sensor placements using Nyström approximations on the covariance matrix. Moreover, we propose several algorithms that select sensors via Nyström approximation of the covariance matrix, utilizing the randomized Nyström approximation, random pivoted Cholesky and greedy pivoted Cholesky. We demonstrate the performance of our method on two applications: thin liquid film dynamics and sea surface temperature.

math.NA

Dynamics of thin film flows on a vertical fibre with vapor absorption

Water vapor capture through free surface flows plays a crucial role in various industrial applications, such as liquid desiccant air conditioning systems, water harvesting, and dewatering. This paper studies the dynamics of a silicone liquid sorbent (also known as water-absorbing silicone oil) flowing down a vertical cylindrical fibre while absorbing water vapor. We propose a one-sided thin-film-type model for these dynamics, where the governing equations form a coupled system of nonlinear fourth-order partial differential equations for the liquid film thickness and oil concentration. The model incorporates gravity, surface tension, Marangoni effects induced by concentration gradients, and non-mass-conserving effects due to absorption flux. Interfacial instabilities, driven by the competition between mass-conserving and non-mass-conserving effects, are investigated via stability analysis. We numerically show that water absorption can lead to the formation of irregular wavy patterns and trigger droplet coalescence downstream. Systematic simulations further identify parameter ranges for the Marangoni number and absorption parameter that lead to the onset of droplet coalescence dynamics and regime transitions.

physics.flu-dyn

Mean field control of droplet dynamics with high order finite element computations

Liquid droplet dynamics are widely used in biological and engineering applications, which contain complex interfacial instabilities and pattern formation such as droplet merging, splitting, and transport. This paper studies a class of mean field control formulations for these droplet dynamics, which can be used to control and manipulate droplets in applications. We first formulate the droplet dynamics as gradient flows of free energies in modified optimal transport metrics with nonlinear mobilities. We then design an optimal control problem for these gradient flows. As an example, a lubrication equation for a thin volatile liquid film laden with an active suspension is developed, with control achieved through its activity field. Lastly, we apply the primal-dual hybrid gradient algorithm with high-order finite element methods to simulate the proposed mean field control problems. Numerical examples, including droplet formation, bead-up/spreading, transport, and merging/splitting on a two-dimensional spatial domain, demonstrate the effectiveness of the proposed mean field control mechanism.

math.OC

Analysis of a Radiotherapy Model for Brain Tumors

In this work, we focus on the analytical and numerical study of a mathematical model for brain tumors with radiotherapy influence. Under certain assumptions on the given data in the model, we prove existence and uniqueness of a weak nonnegative (biological relevant) solution. Then, assuming only more regular initial data, we obtain the extra regularity of this solution. Besides, we analyze the optimal control of the advection coefficient responding for the radiotherapy effect on the tumor cell population. Finally, we provide numerical illustration to all obtained analytical results.

math.AP

Modeling film flows down a rotating slippery cylinder

This study investigates the nonlinear stability and dynamics of gravity-driven viscous films on a vertical rotating cylinder, considering both outer and inner surface flows with slip conditions at the cylinder wall. We develop an asymptotic model for the combined effects of rotation and wall slippage. Linear stability analysis indicates that wall slippage enhances instability on both surfaces, while rotation has differing impacts: it amplifies instability due to slip for outer surface flow but reduces it for inner surface flow. A weakly nonlinear stability analysis is then conducted to explore the combined impact of rotation and wall slip on flow stability beyond the linear regime, including the bifurcation of the nonlinear evolution equation for both surfaces. The traveling wave solution of the model is analyzed, showing how rotation affects nonlinear wave speed with a slippery wall. A stability analysis of the traveling wave solutions is also performed. Numerical simulations of the nonlinear evolution of the free surface reveal that increasing slip length enhances the choke phenomenon in inner surface flow, while rotation can delay this effect. Additionally, simulations show that for flow along the outer surface of a slippery rotating cylinder, the film tends to break up into droplets in the presence of rotation.

physics.flu-dyn

On weak solutions of a control-volume model for liquid films flowing down a fibre

This paper presents an analytical investigation of the solutions to a control volume model for liquid films flowing down a vertical fibre. The evolution of the free surface is governed by a coupled system of degenerate nonlinear partial differential equations, which describe the fluid film's radius and axial velocity. We demonstrate the existence of weak solutions to this coupled system by applying a priori estimates derived from energy-entropy functionals. Additionally, we establish the existence of traveling wave solutions for the system. To illustrate our analytical findings, we present numerical studies that showcase the dynamic solutions of the partial differential equations as well as the traveling wave solutions.

math.AP

Coarsening of thin films with weak condensation

A lubrication model can be used to describe the dynamics of a weakly volatile viscous fluid layer on a hydrophobic substrate. Thin layers of the fluid are unstable to perturbations and break up into slowly evolving interacting droplets. A reduced-order dynamical system is derived from the lubrication model based on the nearest-neighbor droplet interactions in the weak condensation limit. Dynamics for periodic arrays of identical drops and pairwise droplet interactions are investigated which provide insights into the coarsening dynamics for large systems. Weak condensation is shown to be a singular perturbation, fundamentally changing the long-time coarsening dynamics for the droplets and the overall mass of the fluid in two additional regimes of long-time dynamics.

physics.flu-dyn

A positivity-preserving numerical method for a thin liquid film on a vertical cylindrical fiber

When a thin liquid film flows down on a vertical fiber, one can observe the complex and captivating interfacial dynamics of an unsteady flow. Such dynamics are applicable in various fluid experiments due to their high surface area-to-volume ratio. Recent studies verified that when the flow undergoes regime transitions, the magnitude of the film thickness changes dramatically, making numerical simulations challenging. In this paper, we present a computationally efficient numerical method that can maintain the positivity of the film thickness as well as conserve the volume of the fluid under the coarse mesh setting. A series of comparisons to laboratory experiments and previously proposed numerical methods supports the validity of our numerical method. We also prove that our method is second-order consistent in space and satisfies the entropy estimate.

math.NA

An electro-hydrodynamics modeling of droplet actuation on solid surface by surfactant-mediated electro-dewetting

We propose an electro-hydrodynamics model to describe the dynamic evolution of a slender drop containing a dilute ionic surfactant on a naturally wettable surface, with a varying external electric field. This unified model reproduces fundamental microfluidic operations controlled by electrical signals, including dewetting, rewetting, and droplet shifting. In this paper, lubrication theory analysis and numerical simulations illustrate how to electrically control the wettability of surface via the charged surfactant. Our numerical results show that electric field promotes dewetting by attracting ionic surfactants onto the transition thin-film region and promotes rewetting by attracting them away from the region.

physics.flu-dyn

A Neural Ordinary Differential Equation Model for Visualizing Deep Neural Network Behaviors in Multi-Parametric MRI based Glioma Segmentation

Purpose: To develop a neural ordinary differential equation (ODE) model for visualizing deep neural network (DNN) behavior during multi-parametric MRI (mp-MRI) based glioma segmentation as a method to enhance deep learning explainability. Methods: By hypothesizing that deep feature extraction can be modeled as a spatiotemporally continuous process, we designed a novel deep learning model, neural ODE, in which deep feature extraction was governed by an ODE without explicit expression. The dynamics of 1) MR images after interactions with DNN and 2) segmentation formation can be visualized after solving ODE. An accumulative contribution curve (ACC) was designed to quantitatively evaluate the utilization of each MRI by DNN towards the final segmentation results. The proposed neural ODE model was demonstrated using 369 glioma patients with a 4-modality mp-MRI protocol: T1, contrast-enhanced T1 (T1-Ce), T2, and FLAIR. Three neural ODE models were trained to segment enhancing tumor (ET), tumor core (TC), and whole tumor (WT). The key MR modalities with significant utilization by DNN were identified based on ACC analysis. Segmentation results by DNN using only the key MR modalities were compared to the ones using all 4 MR modalities. Results: All neural ODE models successfully illustrated image dynamics as expected. ACC analysis identified T1-Ce as the only key modality in ET and TC segmentations, while both FLAIR and T2 were key modalities in WT segmentation. Compared to the U-Net results using all 4 MR modalities, Dice coefficient of ET (0.784->0.775), TC (0.760->0.758), and WT (0.841->0.837) using the key modalities only had minimal differences without significance. Conclusion: The neural ODE model offers a new tool for optimizing the deep learning model inputs with enhanced explainability. The presented methodology can be generalized to other medical image-related deep learning applications.

q-bio.QM

Heavy Ball Neural Ordinary Differential Equations

We propose heavy ball neural ordinary differential equations (HBNODEs), leveraging the continuous limit of the classical momentum accelerated gradient descent, to improve neural ODEs (NODEs) training and inference. HBNODEs have two properties that imply practical advantages over NODEs: (i) The adjoint state of an HBNODE also satisfies an HBNODE, accelerating both forward and backward ODE solvers, thus significantly reducing the number of function evaluations (NFEs) and improving the utility of the trained models. (ii) The spectrum of HBNODEs is well structured, enabling effective learning of long-term dependencies from complex sequential data. We verify the advantages of HBNODEs over NODEs on benchmark tasks, including image classification, learning complex dynamics, and sequential modeling. Our method requires remarkably fewer forward and backward NFEs, is more accurate, and learns long-term dependencies more effectively than the other ODE-based neural network models. Code is available at \url{https://github.com/hedixia/HeavyBallNODE}.

cs.LG

On travelling wave solutions of a model of a liquid film flowing down a fibre

Existence of non-negative weak solutions is shown for a full curvature thin-film model of a liquid thin film flowing down a vertical fibre. The proof is based on the application of a priori estimates derived for energy-entropy functionals. Long-time behaviour of these weak solutions is analysed and, under some additional constraints for the model parameters and initial values, convergence towards a travelling wave solution is obtained. Numerical studies of energy minimizers and travelling waves are presented to illustrate analytical results.

math.AP

Post-Radiotherapy PET Image Outcome Prediction by Deep Learning under Biological Model Guidance: A Feasibility Study of Oropharyngeal Cancer Application

This paper develops a method of biologically guided deep learning for post-radiation FDG-PET image outcome prediction based on pre-radiation images and radiotherapy dose information. Based on the classic reaction-diffusion mechanism, a novel biological model was proposed using a partial differential equation that incorporates spatial radiation dose distribution as a patient-specific treatment information variable. A 7-layer encoder-decoder-based convolutional neural network (CNN) was designed and trained to learn the proposed biological model. As such, the model could generate post-radiation FDG-PET image outcome predictions with possible time-series transition from pre-radiotherapy image states to post-radiotherapy states. The proposed method was developed using 64 oropharyngeal patients with paired FDG-PET studies before and after 20Gy delivery (2Gy/daily fraction) by IMRT. In a two-branch deep learning execution, the proposed CNN learns specific terms in the biological model from paired FDG-PET images and spatial dose distribution as in one branch, and the biological model generates post-20Gy FDG-PET image prediction in the other branch. The proposed method successfully generated post-20Gy FDG-PET image outcome prediction with breakdown illustrations of biological model components. Time-series FDG-PET image predictions were generated to demonstrate the feasibility of disease response rendering. The developed biologically guided deep learning method achieved post-20Gy FDG-PET image outcome predictions in good agreement with ground-truth results. With break-down biological modeling components, the outcome image predictions could be used in adaptive radiotherapy decision-making to optimize personalized plans for the best outcome in the future.

physics.med-ph

Stable finite difference methods for Kirchhoff-Love plates on overlapping grids

In this work, we propose and develop efficient and accurate numerical methods for solving the Kirchhoff-Love plate model in domains with complex geometries. The algorithms proposed here employ curvilinear finite-difference methods for spatial discretization of the governing PDEs on general composite overlapping grids. The coupling of different components of the composite overlapping grid is through numerical interpolations. However, interpolations introduce perturbation to the finite-difference discretization, which causes numerical instability for time-stepping schemes used to advance the resulted semi-discrete system. To address the instability, we propose to add a fourth-order hyper-dissipation to the spatially discretized system to stabilize its time integration; this additional dissipation term captures the essential upwinding effect of the original upwind scheme. The investigation of strategies for incorporating the upwind dissipation term into several time-stepping schemes (both explicit and implicit) leads to the development of four novel algorithms. For each algorithm, formulas for determining a stable time step and a sufficient dissipation coefficient on curvilinear grids are derived by performing a local Fourier analysis. Quadratic eigenvalue problems for a simplified model plate in 1D domain are considered to reveal the weak instability due to the presence of interpolating equations in the spatial discretization. This model problem is further investigated for the stabilization effects of the proposed algorithms. Carefully designed numerical experiments are carried out to validate the accuracy and stability of the proposed algorithms, followed by two benchmark problems to demonstrate the capability and efficiency of our approach for solving realistic applications. Results that concern the performance of the proposed algorithms are also presented.

math.NA

A theory for undercompressive shocks in tears of wine

We revisit the tears of wine problem for thin films in water-ethanol mixtures and present a new model for the climbing dynamics. The new formulation includes a Marangoni stress balanced by both the normal and tangential components of gravity as well as surface tension which lead to distinctly different behavior. The prior literature did not address the wine tears but rather the behavior of the film at earlier stages and the behavior of the meniscus. In the lubrication limit we obtain an equation that is already well-known for rising films in the presence of thermal gradients. Such models can exhibit non-classical shocks that are undercompressive. We present basic theory that allows one to identify the signature of an undercompressive (UC) wave. We observe both compressive and undercompressive waves in new experiments and we argue that, in the case of a pre-coated glass, the famous "wine tears" emerge from a reverse undercompressive shock originating at the meniscus.

physics.flu-dyn

Stable and accurate numerical methods for generalized Kirchhoff-Love plates

Efficient and accurate numerical algorithms are developed to solve a generalized Kirchhoff-Love plate model subject to three common physical boundary conditions: (i) clamped; (ii) simply supported; and (iii) free. We solve the model equation by discretizing the spatial derivatives using second-order finite-difference schemes, and then advancing the semi-discrete problem in time with either an explicit predictor-corrector or an implicit Newmark-Beta time-stepping algorithm. Stability analysis is conducted for the schemes and the results are used to determine stable time steps in practice. A series of carefully chosen test problems are solved to demonstrate the properties and applications of our numerical approaches. The numerical results confirm the stability and 2nd-order accuracy of the algorithms, and are also comparable with experiments for similar thin plates. As an application, we illustrate a strategy to identify the natural frequencies of a plate using our numerical methods in conjunction with a fast Fourier transformation (FFT) power spectrum analysis of the computed data. Then we take advantage of one of the computed natural frequencies to simulate the interesting physical phenomena known as resonance and beat for a generalized Kirchhoff-Love plate.

math.NA

Modeling film flows down a fibre influenced by nozzle geometry

We study the effects of nozzle geometry on the dynamics of thin fluid films flowing down a vertical cylindrical fibre. Recent experiments show that varying the nozzle diameter can lead to different flow regimes and droplet characteristics in the film. Using a weighted residual modeling approach, we develop a system of coupled equations that account for inertia, surface tension effects, gravity, and a film stabilization mechanism to describe both near-nozzle fluid structures and downstream bead dynamics. We report good agreement between the predicted droplet properties and the experimental data.

physics.flu-dyn