arXiv subjects

Hans Rabus

Publications and source records attributed to Hans Rabus.

30 records · Page 2Linked to original sources

arXiv2023

Experimental benchmark data for Monte Carlo simulated radiation effects of gold nanoparticles. Part I: Experiment and raw data analysis

Electron emission spectra of gold nanoparticles (AuNPs) after photon interaction were measured over the energy range between 50 eV and 9500 eV to provide reference data for Monte Carlo radiation-transport simulations. Experiments were performed with the HAXPES spectrometer at the PETRA III high-brilliance beamline P22 at DESY (Hamburg, Germany) for photon energies below and above each of the gold L-edges, i.e., at 11.9 keV, 12.0 keV, 13.7 keV, 13.8 keV, 14.3 keV, and 14.4 keV. The study focused on a sample with gold nanoparticles with an average diameter of 11.0 nm on a thin carbon foil. Additional measurements were performed on a sample with 5.3 nm gold nanoparticles and on reference samples of gold and carbon foils. Further measurements were made to calibrate the photon flux monitor, to characterize the transmission function of the electron spectrometer and to determine the size of the photon beam. This allowed the determination of the absolute values of the spectral particle radiance of secondary electrons per incident photon flux. The paper presents the experimental and raw data analysis procedures, reviews the data obtained for the nanoparticle samples and discusses their limitations.

physics.med-ph↗

arXiv2023

Comment on "Comparing gold nano-particle enhanced radiotherapy with protons, megavoltage photons and kilovoltage photons: A Monte Carlo simulation" by Lin et al [Phys. Med. Biol. 59 (2014) 7675-7689]

In their article published in Phys. Med. Biol. 59 (2014) 7675-7689, Lin et al studied the dose enhancement of of gold nanoparticles (GNPs) for proton therapy, which they compared with the case of photon irradiation. This comment points out two caveats to the methodlogy used by Lin et al that may not be evident to readers and may contribute to confusion in the literature about the dose enhancement by gold nanoparticles.

physics.med-ph↗

arXiv2023

Comment on "Biological modeling of gold nanoparticle enhanced radiotherapy for proton therapy" by Lin et al. [Phys. Med. Biol. 60 (2015) 4149-4168]

In their article published in Phys. Med. Biol. 60 (2015) 4149-4168, Lin et al studied the radiosensitizing effect of gold nanoparticles (GNPs) using radiation transport simulations and a biological model for the survival of irradiated cells. This comment points out several caveats to the methodlogy used by Lin et al. that may not be evident to readers and may contribute to confusion in the literature about the radiation effects of gold nanoparticles. The two main caveats are the high mass fraction of gold considered and a potential problem with the modified local effect model used to predict cell survival.

physics.med-ph↗

arXiv2022

EURADOS Working Group 6, Computational Dosimetry, a history of promoting good practice via intercomparisons and training

This paper is the editorial of a special issue of Radiation Measurements on EURADOS intercomparisons in computational dosimetry. The articles in this special issue cover complex problems in terms of geometry, particle types, energy ranges, coupled calculations and also scale, with the possibility of performing Monte Carlo calculations on micro and nano dosimetric scales now feasible. A summary of the exercises is provided in the first article of the Special Issue, which presents the findings and common conclusions from the ten articles reporting the results of the different exercises. One of these issues was the correct assessment of bone marrow dose, which prompted the inclusion of an article in this special issue explaining the ICRP-recommended method for bone marrow dosimetry.

physics.comp-ph↗

arXiv2022

Electrical Characterization of DNA Origami Structures with PEG-PLL coating for improved robustness

Electrical conductivity of DNA has been a controversial topic since it was first proposed in 1962. Disparities in the experimental results can often be explained by differences of the ambient or experimental conditions. We report the dielectrophoretic trapping and electrical characterization of two rod-like DNA origami structures with different modifications. These were 12helix bundles, with either thiol-ends or polyA single-stranded overhangs, and 30-helix bundles, with thiol-ends and either with or without a PEG-PLL coating. The observed impedance spectra showed ohmic resistances ranging from 500 k$Ω$ to 3.4 M$Ω$ for the 30-helix bundle structures with a PEG-PLL coating. DNA origami structures without the coating were always nonconductive. Depending on the structure, destruction of the gold nanoelectrodes occurred frequently during the trapping of DNA origami nanostructures. This indicates high currents, resulting from the trapped conductive nanostructures.

cond-mat.soft↗

arXiv2022

Correlated ionisations in two spatially separated nanometric volumes in the track structure of 241Am alpha particles: comparison with Monte Carlo simulations

The production of two double strand breaks in spatially separated locations on the DNA molecule can cause the loss of a whole DNA loop, which can be of substantial length depending on the geometrical position of the two damaged sites and depends on the degree of correlation between ionisation clusters formed in sites of several nanometres in size. In the first part of this paper, nanodosimetric measurements of alpha particle tracks in 1.2 mbar H2O, 1.2 mbar C3H8 and 1.2 mbar C4H8O with the PTB ion counter nanodosimeter were reported. In this second part, the focus is on the geometrical characterisation of the two sites simulated with the nanodosimeter in the three target gases and on the comparison of the measurement results with Monte Carlo simulations. The measurements in 1.2 mbar C3H8 were simulated with a version of the track structure code PTra dedicated to modelling the PTB ion counter nanodosimeter. Further simulations were performed with Geant4-DNA for 241Am alpha particle tracks in liquid water. Simulations of the measurements and the actual measurement results are found to be in good agreement for the investigated irradiation geometries.

physics.ins-det↗

arXiv2022

Lessons learnt from the recent EURADOS intercomparisons in computational dosimetry

Organized by Working Group 6 "Computational Dosimetry" of the European Radiation Dosimetry Group (EURADOS), a group of intercomparison exercises was conducted in which participants were asked to solve predefined problems in computational dosimetry. The results of these comparisons were published in a series of articles in this virtual special issue of Radiation Measurements. This paper reviews the experience gained from the various exercises and highlights the resulting conclusions for future exercises, as well as regarding the state of the art and the need for development in terms of quality assurance for computational dosimetry techniques.

physics.med-ph↗

arXiv2021

Intercomparison of micro- and nanodosimetry Monte Carlo simulations: an approach to assess the influence of different cross-sections for low-energy electrons on the dispersion of results

An intercomparison of microdosimetric and nanodosimetric quantities simulated Monte Carlo codes is in progress with the goal of assessing the uncertainty contribution to simulated results due to the uncertainties of the electron interaction cross-sections used in the codes. In the first stage of the intercomparison, significant discrepancies were found for nanodosimetric quantities as well as for microdosimetric simulations of a radiation source placed at the surface of a spherical water scoring volume. This paper reports insight gained from further analysis, including additional results for the microdosimetry case where the observed discrepancies in the simulated distributions could be traced back to the difference between track-structure and condensed-history approaches. Furthermore, detailed investigations into the sensitivity of nanodosimetric distributions to alterations in inelastic electron scattering cross-sections are presented which were conducted in the lead up to the definition of an approach to be used in the second stage of the intercomparison to come. The suitability of simulation results for assessing the sought uncertainty contributions from cross-sections is discussed and a proposed framework is described.

physics.med-ph↗

arXiv2021

Investigation into the foundations of the track-event theory of cell survival and the radiation action model based on nanodosimetry

This work aims at carving out more clearly the basic assumptions behind the "track-event theory" (TET) and its derivate radiation action model based on nanodosimetry (RAMN) by clearly distinguishing between effects of tracks at the cellular level and the induction of lesions in subcellular targets. It is demonstrated that the model assumptions of Poisson distribution and statistical independence of the frequency of single and clustered DNA lesions are dispensable for multi-event distributions, because they follow from the Poisson distribution of the number of tracks affecting the considered target volume. It is also shown that making these assumptions for the single-event distributions of the number of lethal and sublethal lesions within a cell would lead to an essentially exponential dose dependence of survival for practically relevant values of the absorbed dose. Furthermore, it is elucidated that the model equation used in the literature for consideration of repair within the TET is based on the assumption that DNA lesions induced by different tracks are repaired independently and that the model equation is presumably inconsistent with the model assumptions and requires an additional model parameter. Furthermore, the methodology for deriving model parameters from nanodosimetric properties of particle track structure is critically assessed. Based on data from proton track simulations it is shown that the assumption of statistically independent targets leads to a prediction of negligible frequency of clustered DNA damage. An approach is outlined how track structure could be considered in determining the model parameters, and the implications for TET and RAMN are discussed.

physics.med-ph↗

arXiv2021

Characterisation of the PTB ion counter nanodosimeter's target volume and its equivalent size in terms of liquid H2O

For the first time a dedicated investigation of the target size of a nanodosimeter device has been carried out in order to investigate to what extent measured ionisation cluster size distributions can serve as benchmark data for modelling approaches, with particular focus on the target size in terms of liquid H2O. To this end, measurements with alpha particles from a 241Am source were carried out using three different target gases, H2O, C3H8 and C4H8O. For each of the three target gases, three different drift-time windows were applied to realise three different target sizes. A method has been developed to determine the dimensions of the simulated nanometric target volume in liquid H2O for cylindrical and spherical shape, as often used in approaches to model radiation effects to DNA. Simulations with nanometric targets of dimensions determined with this method agree very well with the corresponding measurements. Scaling of the spatial distribution of the extraction efficiency for different target gases and drift-time windows, which corresponds to the nanodosimeter's target volume, in terms of liquid H2O using ($ρλ_{ion}$)-ratios has also been investigated and proved to yield an estimate of the target volume in liquid H2O. Thus, it can be concluded that ionisation cluster size distributions measured with a nanodosimeter device are suited as benchmark data for approaches that model radiation induced damage to DNA in nanometric volumes of liquid H2O in simple geometries such as cylinders or spheres, provided that the nanodosimeter's target volume is characterised accordingly. By proper selection of drift-time window length as well as target gas and density a wide range of target volume dimensions in terms of liquid H2O can be realised with the PTB Ion Counter nanodosimeter according to specific requirements of modelling approaches.

physics.ins-det↗

arXiv2021

Is the track-event theory of cell survival internally consistent?

The "track event theory" (TET) has been developed in recent years as an alternative to the phenomenological linear-quadratic model for cell survival under exposure to ionizing radiation, particularly for heavy charged particles. The TET is based on a few simple model assumptions including the possibility to derive some of the model parameters from nanodosimetry. This work intends to carve out more clearly the basic assumptions behind the TET and to critically review the resulting mathematical model equations. It is demonstrated that the model assumptions of Poisson distribution and statistical independence of the frequency distributions of so-called one-track and two-track events follow from the Poisson distribution of the number of tracks affecting the considered target volume. It is also shown that the modified TET model equation used in the literature for consideration of repair is inconsistent with the model assumptions and requires an additional model parameter. Furthermore, the derivation of the model parameters from nanodosimetric properties of particle track structure is revealed to lead to a pure exponential dose dependence when the potentially large number of relevant nanometric target volumes inside a cell nucleus is accounted for.

physics.med-ph↗

arXiv2019

Nanodosimetry - on the tracks of biological radiation effectiveness

Biological effectiveness of a certain absorbed dose of ionizing radiation depends on the radiation quality, i. e. the spectrum of ionizing particles and their energy distribution. As has been shown in several studies, the biological effectiveness is related to the pattern of energy deposits on the microscopic scale, the so-called track structure. Clusters of lesions in the DNA molecule within site sizes of few nanometers play a particular role in this context. This work presents a brief overview of nanodosimetric approaches to relate biological effects with track structure derived quantities and experimental techniques to derive such quantities.

physics.med-ph↗