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Haochao Ying

Publications and source records attributed to Haochao Ying.

At least 19 recordsLinked to original sources

SeVeR: Selective Visual Exposure and Retrieval for 3D Medical Image Question Answering

Volumetric medical VQA requires reasoning over long and redundant 3D visual token sequences, especially in multi-sequence MRI where complementary modalities provide diverse diagnostic cues but expose the decoder to many repeated anatomical regions. To investigate reasoning under multi-sequence visual redundancy, we first introduce BreMRIs-VQA, a clinically curated breast MRI benchmark with 1.19M QA pairs from 71.0K sequences and 12.9K patients, covering both free-text and multiple-choice questions. We further propose SeVeR, a selective visual exposure framework that compresses dense volumes into modality-wise prototypes and retrieves complementary multi-level evidence with change-aware gated attention during decoding, trained with a marginal-utility self-consistency objective that suppresses unhelpful retrieval. Experiments on BreMRIs-VQA and public benchmarks show that SeVeR improves both discriminative and generative performance while exposing substantially fewer visual tokens.

cs.CV

D3O: Dynamic Distribution Distillation for Ordinal Regression

Ordinal regression is widely used in scenarios where labels are discrete yet inherently ordered. In practice, however, ordinal labels are often obtained by discretizing underlying continuous semantics through subjective human judgment, resulting in ambiguous boundaries and annotation noise. Such uncertainty challenges existing methods that rely on fixed supervision targets, which may reinforce biased ordering under subjective annotations. To address this limitation, we propose D3O, a dynamic distribution distillation framework that replaces static supervision with training-driven evolution of ordinal label distributions via self-distillation. Specifically, we introduce a contrastive ordinal-aware label enhancement module that leverages vision-language alignment to recover refined label distributions capturing both inter-class ambiguity and instance-level uncertainty. Furthermore, we design a CDF-based cross-layer interaction distillation mechanism to propagate cumulative ordinal structure across network hierarchy, ensuring consistent ordinal geometry in intermediate representations. Extensive experiments on four general ordinal regression tasks demonstrate that our proposed D3O consistently outperforms existing approaches, particularly under severe class imbalance and noisy supervision. These results highlight the effectiveness of dynamic supervision in learning robust ordinal representations beyond fixed targets. The code will be publicly available.

cs.CV

A Scale-adaptive Vision Model Links C. elegans Neuronal Morphology to Behavior for Neurotoxicity Assessment

Neurological disorders are a leading cause of global disability and are increasingly linked to environmental chemical exposures. Yet neurotoxicity assessment still relies on hand-scored morphological readouts that are subjective and poorly predictive of behavioral outcomes. Caenorhabditis elegans provides a genetically tractable, 3R-compliant alternative, but quantifying neuronal phenotypes from confocal microscopy at scale remains computationally challenging: existing vision foundation models, trained on natural or radiological images, cannot resolve the sparse signals and multi-scale lesions of neuronal imaging. Here, we introduce a dedicated self-supervised vision model for C. elegans dopaminergic neurons, together with CeNeuMorph, a multi-grained confocal benchmark of 27,117 annotated images. Specifically, moving beyond standard Masked Autoencoders, we propose a scale-adaptive masked image modeling strategy that jointly learns representations across resolutions and patch sizes under a fixed token budget. By decoupling structural semantic learning from rigid grid constraints, the model effectively resolves the full spectrum of neurodegenerative lesions - ranging from fine dendritic beading to gross soma shrinkage - within a tractable computational framework. Finally, our model surpasses both generalist and biomedical foundation models across classification, segmentation and detection tasks. Fusing visual features with morphological descriptors enables prediction of dopamine-dependent behavioral deficits ($R^2=0.498$). Screening 180 agrochemicals, we identify the benzimidazole moiety as a previously unrecognized determinant of dopaminergic neurotoxicity. Together, the work demonstrates how scale-adaptive self-supervised learning can connect morphology to function for a scalable alternative to mammalian in vivo models for neurotoxicity assessment and drug discovery.

cs.CE

Enabling Agents to Communicate Entirely in Latent Space

While natural language is the de facto communication medium for LLM-based agents, it presents a fundamental constraint. The process of downsampling rich, internal latent states into discrete tokens inherently limits the depth and nuance of information that can be transmitted, thereby hindering collaborative problem-solving. Inspired by telepathy, which bypasses symbolic language in communication, we propose Interlat (Inter-agent Latent Space Communication), a paradigm that leverages the continuous last hidden states of an LLM as a representation of its thought for direct communication (termed latent communication). An additional learned compression process further compresses latent communication via latent space reasoning. Experiments demonstrate that Interlat outperforms both fine-tuned chain-of-thought (CoT) prompting and single-agent baselines, even across heterogeneous models, promoting more exploratory behavior and enabling genuine utilization of latent information. Further compression not only substantially accelerates inference by up to 24 times but also maintains competitive performance through an efficient information-preserving mechanism. We position this work as a feasibility study of entirely latent space inter-agent communication, and our results highlight its potential, offering valuable insights for future research. Our code is available at https://github.com/XiaoDu-flying/Interlat.

cs.LG

HyperVLP: Enhancing Hierarchical Surgical Video-Language Pre-training in Hyperbolic Space

Surgical vision-language foundation models typically adopt educational materials, such as surgical lecture videos, to transfer surgical knowledge encoded in language into visual representations. These knowledge are multi-dimensional and hierarchical: fine-grained action cues appear in narration, mid-level key steps are summarized in subsection headings, and global procedural context, such as patient history and surgical strategy, is described in abstract texts. Prior work largely collapses these heterogeneous signals into a single flat embedding space, implicitly assuming independence across hierarchy levels. However, this is suboptimal because it ignores cross-level semantic containment, e.g., actions belong to steps, steps compose phases, weakens long-range dependency modeling. To this end, we propose a hyperbolic surgical video-language pre-training framework that explicitly preserves the hierarchical structure by mitigating structural false negatives induced by procedural context and enforcing semantic consistency between parent phases and their constituent child steps. Extensive experiments on multiple surgical benchmarks show consistent gains in zero- and few-shot phase recognition across procedures and institutions.

cs.CV

RCM-ACT: Imitation Learning with Dynamic RCM Calibration for Autonomous Intraocular Foreign Body Removal

Intraocular foreign body removal demands millimeter-level precision in confined intraocular spaces, yet existing robotic systems predominantly rely on manual teleoperation with steep learning curves. To address the challenges of autonomous manipulation, particularly kinematic uncertainties from variable motion scaling and Remote Center of Motion (RCM) point variation, we propose RCM-ACT, an imitation learning framework for autonomous intraocular foreign body ring manipulation. Our approach integrates RCM dynamic calibration to resolve coordinate system inconsistencies caused by intraocular instrument variation and introduces the RCM-ACT architecture, which combines action chunking transformers with episode-level kinematic realignment. Trained solely on stereo visual data and instrument kinematics from expert demonstrations in an artificial eye model, RCM-ACT successfully completes ring grasping and positioning tasks without explicit depth sensing. Experimental validation demonstrates the successful implementation of end-to-end autonomy under uncalibrated microscopy conditions, achieving a mean 3-D Euclidean grasp deviation of 0.686 mm and 11/20 full-task successes. The results provide a viable framework for developing intelligent eye surgical systems capable of complex intraocular procedures.

cs.RO

HDMoE: A Hierarchical Decoupling-Fusion Mixture-of-Experts Framework for Multimodal Cancer Survival Prediction

Multimodal survival prediction, a crucial yet challenging task, demands the integration of multimodal medical data (\eg Whole Slide Images (WSIs) and Genomic Profiles) to achieve accurate prognostic modeling. Given the inherent heterogeneity across modalities, the feature decoupling-fusion paradigm has emerged as a dominant approach. However, these methods have the following shortcomings: (1) fail to reduce the redundant information of modality features before decoupling, which negatively affects the feature decoupling and fusion effect;(2) lack the ability to model the fine-grained relationships of the features and capture the local information interactions between intra- and inter-modality features. To address these issues, we propose a \underline{H}ierarchical \underline{D}ecoupling-Fusion \underline{M}ixture-\underline{o}f-\underline{E}xperts (HDMoE) framework with two levels of MoE and \underline{R}andom \underline{F}eature \underline{R}eorganization (RFR) modules.In the first-level MoE, shared experts and routed experts are employed to remove redundant information and extract fine-grained specific features within each modality, while the second-level MoE facilitates fine-grained inter-modality feature decoupling. Besides, we design two RFR modules following each level of MoE to finely fuse intra- and inter-modality features, which can help the model capture more fine-grained relationships between modalities. Extensive experimental results on our private Liver Cancer (LC) and three TCGA public datasets confirm the effectiveness of our proposed method. Codes are available at https://github.com/ZJUMAI/HDMoE.

cs.CV

Large Language Models Could Be Rote Learners

Benchmark-based evaluation, e.g., multiple-choice questions (MCQs) and open-ended questions (OEQs), is widely used for evaluating Large Language Models (LLMs), yet their reliability is undermined by benchmark contamination. When pre-exposed to the testing benchmark during training, less capable LLMs have been found to achieve inflated performance, thereby yielding erroneous results in LLM evaluation. In this study, we reframe contamination as an inherent aspect of learning and seek to disentangle and expose genuine capability acquisition from superficial memorization in LLM evaluation. Following this, firstly, by analyzing model performance under different memorization conditions of MCQs, we uncover a counterintuitive trend: LLMs perform worse on memorized benchmarks than on non-memorized ones, indicating the coexistence of two learning phenomena, i.e., rote memorization and genuine capability learning. To disentangle them, we propose TrinEval, a novel evaluation framework that reformulates MCQs into an alternative knowledge-centric trinity format, reducing memorization while preserving inherent knowledge, enabling the evaluation of genuine capability in the presence of memorization. Extensive experiments validate the effectiveness and robustness of TrinEval in reformulating benchmarks, and the evaluation results further reveal that mainstream LLMs rely on rote memorization for an average of 19.6% of knowledge points across the MMLU and the GSM8K dataset.

cs.CL

Decouple, Reorganize, and Fuse: A Multimodal Framework for Cancer Survival Prediction

Cancer survival analysis commonly integrates information across diverse medical modalities to make survival-time predictions. Existing methods primarily focus on extracting different decoupled features of modalities and performing fusion operations such as concatenation, attention, and \revm{Mixture-of-Experts (MoE)-based fusion. However, these methods still face two key challenges: i) Fixed fusion schemes (concatenation and attention) can lead to model over-reliance on predefined feature combinations, limiting the dynamic fusion of decoupled features; ii) in MoE-based fusion methods, each expert network handles separate decoupled features, which limits information interaction among the decoupled features. To address these challenges, we propose a novel Decoupling-Reorganization-Fusion framework (DeReF), which devises a random feature reorganization strategy between modalities decoupling and dynamic MoE fusion modules.Its advantages are: i) it increases the diversity of feature combinations and granularity, enhancing the generalization ability of the subsequent expert networks; ii) it overcomes the problem of information closure and helps expert networks better capture information among decoupled features. Additionally, we incorporate a regional cross-attention network within the modality decoupling module to improve the representation quality of decoupled features. Extensive experimental results on our in-house Liver Cancer (LC) and three widely used TCGA public datasets confirm the effectiveness of our proposed method. Codes are available at https://github.com/ZJUMAI/DeReF.

cs.CV

Versatile and Risk-Sensitive Cardiac Diagnosis via Graph-Based ECG Signal Representation

Despite the rapid advancements of electrocardiogram (ECG) signal diagnosis and analysis methods through deep learning, two major hurdles still limit their clinical adoption: the lack of versatility in processing ECG signals with diverse configurations, and the inadequate detection of risk signals due to sample imbalances. Addressing these challenges, we introduce VersAtile and Risk-Sensitive cardiac diagnosis (VARS), an innovative approach that employs a graph-based representation to uniformly model heterogeneous ECG signals. VARS stands out by transforming ECG signals into versatile graph structures that capture critical diagnostic features, irrespective of signal diversity in the lead count, sampling frequency, and duration. This graph-centric formulation also enhances diagnostic sensitivity, enabling precise localization and identification of abnormal ECG patterns that often elude standard analysis methods. To facilitate representation transformation, our approach integrates denoising reconstruction with contrastive learning to preserve raw ECG information while highlighting pathognomonic patterns. We rigorously evaluate the efficacy of VARS on three distinct ECG datasets, encompassing a range of structural variations. The results demonstrate that VARS not only consistently surpasses existing state-of-the-art models across all these datasets but also exhibits substantial improvement in identifying risk signals. Additionally, VARS offers interpretability by pinpointing the exact waveforms that lead to specific model outputs, thereby assisting clinicians in making informed decisions. These findings suggest that our VARS will likely emerge as an invaluable tool for comprehensive cardiac health assessment.

cs.AI

SSPO: Self-traced Step-wise Preference Optimization for Process Supervision and Reasoning Compression

Test-time scaling has proven effective in further enhancing the performance of pretrained Large Language Models (LLMs). However, mainstream post-training methods (i.e., reinforcement learning (RL) with chain-of-thought (CoT) reasoning) often incur substantial computational overhead due to auxiliary models and overthinking. In this paper, we empirically reveal that the incorrect answers partially stem from verbose reasoning processes lacking correct self-fix, where errors accumulate across multiple reasoning steps. To this end, we propose Self-traced Step-wise Preference Optimization (SSPO), a pluggable RL process supervision framework that enables fine-grained optimization of each reasoning step. Specifically, SSPO requires neither auxiliary models nor stepwise manual annotations. Instead, it leverages step-wise preference signals generated by the model itself to guide the optimization process for reasoning compression. Experiments demonstrate that the generated reasoning sequences from SSPO are both accurate and succinct, effectively mitigating overthinking behaviors without compromising model performance across diverse domains and languages.

cs.LG

STORM: Benchmarking Visual Rating of MLLMs with a Comprehensive Ordinal Regression Dataset

Visual rating is an essential capability of artificial intelligence (AI) for multi-dimensional quantification of visual content, primarily applied in ordinal regression (OR) tasks such as image quality assessment, facial age estimation, and medical image grading. However, current multi-modal large language models (MLLMs) under-perform in such visual rating ability while also suffering the lack of relevant datasets and benchmarks. In this work, we collect and present STORM, a data collection and benchmark for Stimulating Trustworthy Ordinal Regression Ability of MLLMs for universal visual rating. STORM encompasses 14 ordinal regression datasets across five common visual rating domains, comprising 655K image-level pairs and the corresponding carefully curated VQAs. Importantly, we also propose a coarse-to-fine processing pipeline that dynamically considers label candidates and provides interpretable thoughts, providing MLLMs with a general and trustworthy ordinal thinking paradigm. This benchmark aims to evaluate the all-in-one and zero-shot performance of MLLMs in scenarios requiring understanding of the essential common ordinal relationships of rating labels. Extensive experiments demonstrate the effectiveness of our framework and shed light on better fine-tuning strategies. The STORM dataset, benchmark, and pre-trained models are available on the following webpage to support further research in this area. Datasets and codes are released on the project page: https://storm-bench.github.io/.

cs.CV

Dual-level Fuzzy Learning with Patch Guidance for Image Ordinal Regression

Ordinal regression bridges regression and classification by assigning objects to ordered classes. While human experts rely on discriminative patch-level features for decisions, current approaches are limited by the availability of only image-level ordinal labels, overlooking fine-grained patch-level characteristics. In this paper, we propose a Dual-level Fuzzy Learning with Patch Guidance framework, named DFPG that learns precise feature-based grading boundaries from ambiguous ordinal labels, with patch-level supervision. Specifically, we propose patch-labeling and filtering strategies to enable the model to focus on patch-level features exclusively with only image-level ordinal labels available. We further design a dual-level fuzzy learning module, which leverages fuzzy logic to quantitatively capture and handle label ambiguity from both patch-wise and channel-wise perspectives. Extensive experiments on various image ordinal regression datasets demonstrate the superiority of our proposed method, further confirming its ability in distinguishing samples from difficult-to-classify categories. The code is available at https://github.com/ZJUMAI/DFPG-ord.

cs.CV

Uncertainty-Aware Multi-Expert Knowledge Distillation for Imbalanced Disease Grading

Automatic disease image grading is a significant application of artificial intelligence for healthcare, enabling faster and more accurate patient assessments. However, domain shifts, which are exacerbated by data imbalance, introduce bias into the model, posing deployment difficulties in clinical applications. To address the problem, we propose a novel \textbf{U}ncertainty-aware \textbf{M}ulti-experts \textbf{K}nowledge \textbf{D}istillation (UMKD) framework to transfer knowledge from multiple expert models to a single student model. Specifically, to extract discriminative features, UMKD decouples task-agnostic and task-specific features with shallow and compact feature alignment in the feature space. At the output space, an uncertainty-aware decoupled distillation (UDD) mechanism dynamically adjusts knowledge transfer weights based on expert model uncertainties, ensuring robust and reliable distillation. Additionally, UMKD also tackles the problems of model architecture heterogeneity and distribution discrepancies between source and target domains, which are inadequately tackled by previous KD approaches. Extensive experiments on histology prostate grading (\textit{SICAPv2}) and fundus image grading (\textit{APTOS}) demonstrate that UMKD achieves a new state-of-the-art in both source-imbalanced and target-imbalanced scenarios, offering a robust and practical solution for real-world disease image grading.

cs.CV

AnyECG: Foundational Models for Multitask Cardiac Analysis in Real-World Settings

Electrocardiogram (ECG), a non-invasive and affordable tool for cardiac monitoring, is highly sensitive in detecting acute heart attacks. However, due to the lengthy nature of ECG recordings, numerous machine learning methods have been developed for automated heart disease detection to reduce human workload. Despite these efforts, performance remains suboptimal. A key obstacle is the inherent complexity of ECG data, which includes heterogeneity (e.g., varying sampling rates), high levels of noise, demographic-related pattern shifts, and intricate rhythm-event associations. To overcome these challenges, this paper introduces AnyECG, a foundational model designed to extract robust representations from any real-world ECG data. Specifically, a tailored ECG Tokenizer encodes each fixed-duration ECG fragment into a token and, guided by proxy tasks, converts noisy, continuous ECG features into discrete, compact, and clinically meaningful local rhythm codes. These codes encapsulate basic morphological, frequency, and demographic information (e.g., sex), effectively mitigating signal noise. We further pre-train the AnyECG to learn rhythmic pattern associations across ECG tokens, enabling the capture of cardiac event semantics. By being jointly pre-trained on diverse ECG data sources, AnyECG is capable of generalizing across a wide range of downstream tasks where ECG signals are recorded from various devices and scenarios. The experimental results show that AnyECG achieves an average performance improvement of 6% across four critical tasks-anomaly detection, arrhythmia classification, corrupted lead generation, and ultra-long ECG recognition. AnyECG learns common ECG rhythm from data and significantly outperforms state-of-the-art methods in each of these tasks.

eess.SP

Joint Explicit and Implicit Cross-Modal Interaction Network for Anterior Chamber Inflammation Diagnosis

Uveitis demands the precise diagnosis of anterior chamber inflammation (ACI) for optimal treatment. However, current diagnostic methods only rely on a limited single-modal disease perspective, which leads to poor performance. In this paper, we investigate a promising yet challenging way to fuse multimodal data for ACI diagnosis. Notably, existing fusion paradigms focus on empowering implicit modality interactions (i.e., self-attention and its variants), but neglect to inject explicit modality interactions, especially from clinical knowledge and imaging property. To this end, we propose a jointly Explicit and implicit Cross-Modal Interaction Network (EiCI-Net) for Anterior Chamber Inflammation Diagnosis that uses anterior segment optical coherence tomography (AS-OCT) images, slit-lamp images, and clinical data jointly. Specifically, we first develop CNN-Based Encoders and Tabular Processing Module (TPM) to extract efficient feature representations in different modalities. Then, we devise an Explicit Cross-Modal Interaction Module (ECIM) to generate attention maps as a kind of explicit clinical knowledge based on the tabular feature maps, then integrated them into the slit-lamp feature maps, allowing the CNN-Based Encoder to focus on more effective informativeness of the slit-lamp images. After that, the Implicit Cross-Modal Interaction Module (ICIM), a transformer-based network, further implicitly enhances modality interactions. Finally, we construct a considerable real-world dataset from our collaborative hospital and conduct sufficient experiments to demonstrate the superior performance of our proposed EiCI-Net compared with the state-of-the-art classification methods in various metrics.

cs.CV

SelFLoc: Selective Feature Fusion for Large-scale Point Cloud-based Place Recognition

Point cloud-based place recognition is crucial for mobile robots and autonomous vehicles, especially when the global positioning sensor is not accessible. LiDAR points are scattered on the surface of objects and buildings, which have strong shape priors along different axes. To enhance message passing along particular axes, Stacked Asymmetric Convolution Block (SACB) is designed, which is one of the main contributions in this paper. Comprehensive experiments demonstrate that asymmetric convolution and its corresponding strategies employed by SACB can contribute to the more effective representation of point cloud feature. On this basis, Selective Feature Fusion Block (SFFB), which is formed by stacking point- and channel-wise gating layers in a predefined sequence, is proposed to selectively boost salient local features in certain key regions, as well as to align the features before fusion phase. SACBs and SFFBs are combined to construct a robust and accurate architecture for point cloud-based place recognition, which is termed SelFLoc. Comparative experimental results show that SelFLoc achieves the state-of-the-art (SOTA) performance on the Oxford and other three in-house benchmarks with an improvement of 1.6 absolute percentages on mean average recall@1.

cs.CV

Fair Evaluation of Federated Learning Algorithms for Automated Breast Density Classification: The Results of the 2022 ACR-NCI-NVIDIA Federated Learning Challenge

The correct interpretation of breast density is important in the assessment of breast cancer risk. AI has been shown capable of accurately predicting breast density, however, due to the differences in imaging characteristics across mammography systems, models built using data from one system do not generalize well to other systems. Though federated learning (FL) has emerged as a way to improve the generalizability of AI without the need to share data, the best way to preserve features from all training data during FL is an active area of research. To explore FL methodology, the breast density classification FL challenge was hosted in partnership with the American College of Radiology, Harvard Medical School's Mass General Brigham, University of Colorado, NVIDIA, and the National Institutes of Health National Cancer Institute. Challenge participants were able to submit docker containers capable of implementing FL on three simulated medical facilities, each containing a unique large mammography dataset. The breast density FL challenge ran from June 15 to September 5, 2022, attracting seven finalists from around the world. The winning FL submission reached a linear kappa score of 0.653 on the challenge test data and 0.413 on an external testing dataset, scoring comparably to a model trained on the same data in a central location.

eess.IV