arXiv subjects

Hengrui Cai

Publications and source records attributed to Hengrui Cai.

32 records · Page 2Linked to original sources

arXiv2024

Conformal Diffusion Models for Individual Treatment Effect Estimation and Inference

Estimating treatment effects from observational data is of central interest across numerous application domains. Individual treatment effect offers the most granular measure of treatment effect on an individual level, and is the most useful to facilitate personalized care. However, its estimation and inference remain underdeveloped due to several challenges. In this article, we propose a novel conformal diffusion model-based approach that addresses those intricate challenges. We integrate the highly flexible diffusion modeling, the model-free statistical inference paradigm of conformal inference, along with propensity score and covariate local approximation that tackle distributional shifts. We unbiasedly estimate the distributions of potential outcomes for individual treatment effect, construct an informative confidence interval, and establish rigorous theoretical guarantees. We demonstrate the competitive performance of the proposed method over existing solutions through extensive numerical studies.

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arXiv2024

Sequential Knockoffs for Variable Selection in Reinforcement Learning

In real-world applications of reinforcement learning, it is often challenging to obtain a state representation that is parsimonious and satisfies the Markov property without prior knowledge. Consequently, it is common practice to construct a state larger than necessary, e.g., by concatenating measurements over contiguous time points. However, needlessly increasing the dimension of the state may slow learning and obfuscate the learned policy. We introduce the notion of a minimal sufficient state in a Markov decision process (MDP) as the subvector of the original state under which the process remains an MDP and shares the same reward function as the original process. We propose a novel SEquEntial Knockoffs (SEEK) algorithm that estimates the minimal sufficient state in a system with high-dimensional complex nonlinear dynamics. In large samples, the proposed method achieves selection consistency. As the method is agnostic to the reinforcement learning algorithm being applied, it benefits downstream tasks such as policy learning. Empirical experiments verify theoretical results and show the proposed approach outperforms several competing methods regarding variable selection accuracy and regret.

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arXiv2024

On Efficient Inference of Causal Effects with Multiple Mediators

This paper provides robust estimators and efficient inference of causal effects involving multiple interacting mediators. Most existing works either impose a linear model assumption among the mediators or are restricted to handle conditionally independent mediators given the exposure. To overcome these limitations, we define causal and individual mediation effects in a general setting, and employ a semiparametric framework to develop quadruply robust estimators for these causal effects. We further establish the asymptotic normality of the proposed estimators and prove their local semiparametric efficiencies. The proposed method is empirically validated via simulated and real datasets concerning psychiatric disorders in trauma survivors.

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arXiv2023

On Learning Necessary and Sufficient Causal Graphs

The causal revolution has stimulated interest in understanding complex relationships in various fields. Most of the existing methods aim to discover causal relationships among all variables within a complex large-scale graph. However, in practice, only a small subset of variables in the graph are relevant to the outcomes of interest. Consequently, causal estimation with the full causal graph -- particularly given limited data -- could lead to numerous falsely discovered, spurious variables that exhibit high correlation with, but exert no causal impact on, the target outcome. In this paper, we propose learning a class of necessary and sufficient causal graphs (NSCG) that exclusively comprises causally relevant variables for an outcome of interest, which we term causal features. The key idea is to employ probabilities of causation to systematically evaluate the importance of features in the causal graph, allowing us to identify a subgraph relevant to the outcome of interest. To learn NSCG from data, we develop a necessary and sufficient causal structural learning (NSCSL) algorithm, by establishing theoretical properties and relationships between probabilities of causation and natural causal effects of features. Across empirical studies of simulated and real data, we demonstrate that NSCSL outperforms existing algorithms and can reveal crucial yeast genes for target heritable traits of interest.

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arXiv2023

Towards Trustworthy Explanation: On Causal Rationalization

With recent advances in natural language processing, rationalization becomes an essential self-explaining diagram to disentangle the black box by selecting a subset of input texts to account for the major variation in prediction. Yet, existing association-based approaches on rationalization cannot identify true rationales when two or more snippets are highly inter-correlated and thus provide a similar contribution to prediction accuracy, so-called spuriousness. To address this limitation, we novelly leverage two causal desiderata, non-spuriousness and efficiency, into rationalization from the causal inference perspective. We formally define a series of probabilities of causation based on a newly proposed structural causal model of rationalization, with its theoretical identification established as the main component of learning necessary and sufficient rationales. The superior performance of the proposed causal rationalization is demonstrated on real-world review and medical datasets with extensive experiments compared to state-of-the-art methods.

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arXiv2023

On Heterogeneous Treatment Effects in Heterogeneous Causal Graphs

Heterogeneity and comorbidity are two interwoven challenges associated with various healthcare problems that greatly hampered research on developing effective treatment and understanding of the underlying neurobiological mechanism. Very few studies have been conducted to investigate heterogeneous causal effects (HCEs) in graphical contexts due to the lack of statistical methods. To characterize this heterogeneity, we first conceptualize heterogeneous causal graphs (HCGs) by generalizing the causal graphical model with confounder-based interactions and multiple mediators. Such confounders with an interaction with the treatment are known as moderators. This allows us to flexibly produce HCGs given different moderators and explicitly characterize HCEs from the treatment or potential mediators on the outcome. We establish the theoretical forms of HCEs and derive their properties at the individual level in both linear and nonlinear models. An interactive structural learning is developed to estimate the complex HCGs and HCEs with confidence intervals provided. Our method is empirically justified by extensive simulations and its practical usefulness is illustrated by exploring causality among psychiatric disorders for trauma survivors.

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arXiv2023

CAPITAL: Optimal Subgroup Identification via Constrained Policy Tree Search

Personalized medicine, a paradigm of medicine tailored to a patient's characteristics, is an increasingly attractive field in health care. An important goal of personalized medicine is to identify a subgroup of patients, based on baseline covariates, that benefits more from the targeted treatment than other comparative treatments. Most of the current subgroup identification methods only focus on obtaining a subgroup with an enhanced treatment effect without paying attention to subgroup size. Yet, a clinically meaningful subgroup learning approach should identify the maximum number of patients who can benefit from the better treatment. In this paper, we present an optimal subgroup selection rule (SSR) that maximizes the number of selected patients, and in the meantime, achieves the pre-specified clinically meaningful mean outcome, such as the average treatment effect. We derive two equivalent theoretical forms of the optimal SSR based on the contrast function that describes the treatment-covariates interaction in the outcome. We further propose a ConstrAined PolIcy Tree seArch aLgorithm (CAPITAL) to find the optimal SSR within the interpretable decision tree class. The proposed method is flexible to handle multiple constraints that penalize the inclusion of patients with negative treatment effects, and to address time to event data using the restricted mean survival time as the clinically interesting mean outcome. Extensive simulations, comparison studies, and real data applications are conducted to demonstrate the validity and utility of our method.

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arXiv2023

Jump Interval-Learning for Individualized Decision Making

An individualized decision rule (IDR) is a decision function that assigns each individual a given treatment based on his/her observed characteristics. Most of the existing works in the literature consider settings with binary or finitely many treatment options. In this paper, we focus on the continuous treatment setting and propose a jump interval-learning to develop an individualized interval-valued decision rule (I2DR) that maximizes the expected outcome. Unlike IDRs that recommend a single treatment, the proposed I2DR yields an interval of treatment options for each individual, making it more flexible to implement in practice. To derive an optimal I2DR, our jump interval-learning method estimates the conditional mean of the outcome given the treatment and the covariates via jump penalized regression, and derives the corresponding optimal I2DR based on the estimated outcome regression function. The regressor is allowed to be either linear for clear interpretation or deep neural network to model complex treatment-covariates interactions. To implement jump interval-learning, we develop a searching algorithm based on dynamic programming that efficiently computes the outcome regression function. Statistical properties of the resulting I2DR are established when the outcome regression function is either a piecewise or continuous function over the treatment space. We further develop a procedure to infer the mean outcome under the (estimated) optimal policy. Extensive simulations and a real data application to a warfarin study are conducted to demonstrate the empirical validity of the proposed I2DR.

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arXiv2023

Heterogeneous Synthetic Learner for Panel Data

In the new era of personalization, learning the heterogeneous treatment effect (HTE) becomes an inevitable trend with numerous applications. Yet, most existing HTE estimation methods focus on independently and identically distributed observations and cannot handle the non-stationarity and temporal dependency in the common panel data setting. The treatment evaluators developed for panel data, on the other hand, typically ignore the individualized information. To fill the gap, in this paper, we initialize the study of HTE estimation in panel data. Under different assumptions for HTE identifiability, we propose the corresponding heterogeneous one-side and two-side synthetic learner, namely H1SL and H2SL, by leveraging the state-of-the-art HTE estimator for non-panel data and generalizing the synthetic control method that allows flexible data generating process. We establish the convergence rates of the proposed estimators. The superior performance of the proposed methods over existing ones is demonstrated by extensive numerical studies.

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arXiv2022

Calibrated Optimal Decision Making with Multiple Data Sources and Limited Outcome

We consider the optimal decision-making problem in a primary sample of interest with multiple auxiliary sources available. The outcome of interest is limited in the sense that it is only observed in the primary sample. In reality, such multiple data sources may belong to heterogeneous studies and thus cannot be combined directly. This paper proposes a new framework to handle heterogeneous samples and address the limited outcome simultaneously through a novel calibrated optimal decision-making method, by leveraging the common intermediate outcomes in multiple data sources. Specifically, our method allows the baseline covariates across different samples to have either homogeneous or heterogeneous distributions. Under the equal conditional means of intermediate outcomes in different samples given baseline covariates and the treatment information, we show that the proposed estimator of the conditional mean outcome is asymptotically normal and more efficient than using the primary sample solely. Extensive experiments on simulated datasets demonstrate empirical validity and improved efficiency using our approach, followed by a real application to electronic health records.

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arXiv2021

Deep Jump Learning for Off-Policy Evaluation in Continuous Treatment Settings

We consider off-policy evaluation (OPE) in continuous treatment settings, such as personalized dose-finding. In OPE, one aims to estimate the mean outcome under a new treatment decision rule using historical data generated by a different decision rule. Most existing works on OPE focus on discrete treatment settings. To handle continuous treatments, we develop a novel estimation method for OPE using deep jump learning. The key ingredient of our method lies in adaptively discretizing the treatment space using deep discretization, by leveraging deep learning and multi-scale change point detection. This allows us to apply existing OPE methods in discrete treatments to handle continuous treatments. Our method is further justified by theoretical results, simulations, and a real application to Warfarin Dosing.

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arXiv2021

Periodic-GP: Learning Periodic World with Gaussian Process Bandits

We consider the sequential decision optimization on the periodic environment, that occurs in a wide variety of real-world applications when the data involves seasonality, such as the daily demand of drivers in ride-sharing and dynamic traffic patterns in transportation. In this work, we focus on learning the stochastic periodic world by leveraging this seasonal law. To deal with the general action space, we use the bandit based on Gaussian process (GP) as the base model due to its flexibility and generality, and propose the Periodic-GP method with a temporal periodic kernel based on the upper confidence bound. Theoretically, we provide a new regret bound of the proposed method, by explicitly characterizing the periodic kernel in the periodic stationary model. Empirically, the proposed algorithm significantly outperforms the existing methods in both synthetic data experiments and a real data application on Madrid traffic pollution.

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arXiv2021

GEAR: On Optimal Decision Making with Auxiliary Data

Personalized optimal decision making, finding the optimal decision rule (ODR) based on individual characteristics, has attracted increasing attention recently in many fields, such as education, economics, and medicine. Current ODR methods usually require the primary outcome of interest in samples for assessing treatment effects, namely the experimental sample. However, in many studies, treatments may have a long-term effect, and as such the primary outcome of interest cannot be observed in the experimental sample due to the limited duration of experiments, which makes the estimation of ODR impossible. This paper is inspired to address this challenge by making use of an auxiliary sample to facilitate the estimation of ODR in the experimental sample. We propose an auGmented inverse propensity weighted Experimental and Auxiliary sample-based decision Rule (GEAR) by maximizing the augmented inverse propensity weighted value estimator over a class of decision rules using the experimental sample, with the primary outcome being imputed based on the auxiliary sample. The asymptotic properties of the proposed GEAR estimators and their associated value estimators are established. Simulation studies are conducted to demonstrate its empirical validity with a real AIDS application.

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arXiv2016

A Threshold-free Prospective Prediction Accuracy Measure for Censored Time to Event Data

Prediction performance of a risk scoring system needs to be carefully assessed before its adoption in clinical practice. Clinical preventive care often uses risk scores to screen asymptomatic population. The primary clinical interest is to predict the risk of having an event by a pre-specified future time $t_0$. Prospective accuracy measures such as positive predictive values have been recommended for evaluating the predictive performance. However, for commonly used continuous or ordinal risk score systems, these measures require a subjective cutoff threshold value that dichotomizes the risk scores. The need for a cut-off value created barriers for practitioners and researchers. In this paper, we propose a threshold-free summary index of positive predictive values that accommodates time-dependent event status. We develop a nonparametric estimator and provide an inference procedure for comparing this summary measure between competing risk scores for censored time to event data. We conduct a simulation study to examine the finite-sample performance of the proposed estimation and inference procedures. Lastly, we illustrate the use of this measure on a real data example, comparing two risk score systems for predicting heart failure in childhood cancer survivors.

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