arXiv subjects

Herbert Van de Sompel

Publications and source records attributed to Herbert Van de Sompel.

At least 37 records · Page 2Linked to original sources

arXiv2011

Evaluating the SharedCanvas Manuscript Data Model in CATCHPlus

In this paper, we present the SharedCanvas model for describing the layout of culturally important, hand-written objects such as medieval manuscripts, which is intended to be used as a common input format to presentation interfaces. The model is evaluated using two collections from CATCHPlus not consulted during the design phase, each with their own complex requirements, in order to determine if further development is required or if the model is ready for general usage. The model is applied to the new collections, revealing several new areas of concern for user interface production and discovery of the constituent resources. However, the fundamental information modelling aspects of SharedCanvas and the underlying Open Annotation Collaboration ontology are demonstrated to be sufficient to cover the challenging new requirements. The distributed, Linked Open Data approach is validated as an important methodology to seamlessly allow simultaneous interaction with multiple repositories, and at the same time to facilitate both scholarly commentary and crowd-sourcing of the production of transcriptions.

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arXiv2011

Analyzing the Persistence of Referenced Web Resources with Memento

In this paper we present the results of a study into the persistence and availability of web resources referenced from papers in scholarly repositories. Two repositories with different characteristics, arXiv and the UNT digital library, are studied to determine if the nature of the repository, or of its content, has a bearing on the availability of the web resources cited by that content. Memento makes it possible to automate discovery of archived resources and to consider the time between the publication of the research and the archiving of the referenced URLs. This automation allows us to process more than 160000 URLs, the largest known such study, and the repository metadata allows consideration of the results by discipline. The results are startling: 45% (66096) of the URLs referenced from arXiv still exist, but are not preserved for future generations, and 28% of resources referenced by UNT papers have been lost. Moving forwards, we provide some initial recommendations, including that repositories should publish URL lists extracted from papers that could be used as seeds for web archiving systems.

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arXiv2011

SharedCanvas: A Collaborative Model for Medieval Manuscript Layout Dissemination

In this paper we present a model based on the principles of Linked Data that can be used to describe the interrelationships of images, texts and other resources to facilitate the interoperability of repositories of medieval manuscripts or other culturally important handwritten documents. The model is designed from a set of requirements derived from the real world use cases of some of the largest digitized medieval content holders, and instantiations of the model are intended as the input to collection-independent page turning and scholarly presentation interfaces. A canvas painting paradigm, such as in PDF and SVG, was selected based on the lack of a one to one correlation between image and page, and to fulfill complex requirements such as when the full text of a page is known, but only fragments of the physical object remain. The model is implemented using technologies such as OAI-ORE Aggregations and OAC Annotations, as the fundamental building blocks of emerging Linked Digital Libraries. The model and implementation are evaluated through prototypes of both content providing and consuming applications. Although the system was designed from requirements drawn from the medieval manuscript domain, it is applicable to any layout-oriented presentation of images of text.

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arXiv2010

Making Web Annotations Persistent over Time

As Digital Libraries (DL) become more aligned with the web architecture, their functional components need to be fundamentally rethought in terms of URIs and HTTP. Annotation, a core scholarly activity enabled by many DL solutions, exhibits a clearly unacceptable characteristic when existing models are applied to the web: due to the representations of web resources changing over time, an annotation made about a web resource today may no longer be relevant to the representation that is served from that same resource tomorrow. We assume the existence of archived versions of resources, and combine the temporal features of the emerging Open Annotation data model with the capability offered by the Memento framework that allows seamless navigation from the URI of a resource to archived versions of that resource, and arrive at a solution that provides guarantees regarding the persistence of web annotations over time. More specifically, we provide theoretical solutions and proof-of-concept experimental evaluations for two problems: reconstructing an existing annotation so that the correct archived version is displayed for all resources involved in the annotation, and retrieving all annotations that involve a given archived version of a web resource.

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arXiv2010

An HTTP-Based Versioning Mechanism for Linked Data

Dereferencing a URI returns a representation of the current state of the resource identified by that URI. But, on the Web representations of prior states of a resource are also available, for example, as resource versions in Content Management Systems or archival resources in Web Archives such as the Internet Archive. This paper introduces a resource versioning mechanism that is fully based on HTTP and uses datetime as a global version indicator. The approach allows "follow your nose" style navigation both from the current time-generic resource to associated time-specific version resources as well as among version resources. The proposed versioning mechanism is congruent with the Architecture of the World Wide Web, and is based on the Memento framework that extends HTTP with transparent content negotiation in the datetime dimension. The paper shows how the versioning approach applies to Linked Data, and by means of a demonstrator built for DBpedia, it also illustrates how it can be used to conduct a time-series analysis across versions of Linked Data descriptions.

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arXiv2009

Memento: Time Travel for the Web

The Web is ephemeral. Many resources have representations that change over time, and many of those representations are lost forever. A lucky few manage to reappear as archived resources that carry their own URIs. For example, some content management systems maintain version pages that reflect a frozen prior state of their changing resources. Archives recurrently crawl the web to obtain the actual representation of resources, and subsequently make those available via special-purpose archived resources. In both cases, the archival copies have URIs that are protocol-wise disconnected from the URI of the resource of which they represent a prior state. Indeed, the lack of temporal capabilities in the most common Web protocol, HTTP, prevents getting to an archived resource on the basis of the URI of its original. This turns accessing archived resources into a significant discovery challenge for both human and software agents, which typically involves following a multitude of links from the original to the archival resource, or of searching archives for the original URI. This paper proposes the protocol-based Memento solution to address this problem, and describes a proof-of-concept experiment that includes major servers of archival content, including Wikipedia and the Internet Archive. The Memento solution is based on existing HTTP capabilities applied in a novel way to add the temporal dimension. The result is a framework in which archived resources can seamlessly be reached via the URI of their original: protocol-based time travel for the Web.

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arXiv2009

From Artifacts to Aggregations: Modeling Scientific Life Cycles on the Semantic Web

In the process of scientific research, many information objects are generated, all of which may remain valuable indefinitely. However, artifacts such as instrument data and associated calibration information may have little value in isolation; their meaning is derived from their relationships to each other. Individual artifacts are best represented as components of a life cycle that is specific to a scientific research domain or project. Current cataloging practices do not describe objects at a sufficient level of granularity nor do they offer the globally persistent identifiers necessary to discover and manage scholarly products with World Wide Web standards. The Open Archives Initiative's Object Reuse and Exchange data model (OAI-ORE) meets these requirements. We demonstrate a conceptual implementation of OAI-ORE to represent the scientific life cycles of embedded networked sensor applications in seismology and environmental sciences. By establishing relationships between publications, data, and contextual research information, we illustrate how to obtain a richer and more realistic view of scientific practices. That view can facilitate new forms of scientific research and learning. Our analysis is framed by studies of scientific practices in a large, multi-disciplinary, multi-university science and engineering research center, the Center for Embedded Networked Sensing (CENS).

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arXiv2009

A principal component analysis of 39 scientific impact measures

The impact of scientific publications has traditionally been expressed in terms of citation counts. However, scientific activity has moved online over the past decade. To better capture scientific impact in the digital era, a variety of new impact measures has been proposed on the basis of social network analysis and usage log data. Here we investigate how these new measures relate to each other, and how accurately and completely they express scientific impact. We performed a principal component analysis of the rankings produced by 39 existing and proposed measures of scholarly impact that were calculated on the basis of both citation and usage log data. Our results indicate that the notion of scientific impact is a multi-dimensional construct that can not be adequately measured by any single indicator, although some measures are more suitable than others. The commonly used citation Impact Factor is not positioned at the core of this construct, but at its periphery, and should thus be used with caution.

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arXiv2009

Adding eScience Assets to the Data Web

Aggregations of Web resources are increasingly important in scholarship as it adopts new methods that are data-centric, collaborative, and networked-based. The same notion of aggregations of resources is common to the mashed-up, socially networked information environment of Web 2.0. We present a mechanism to identify and describe aggregations of Web resources that has resulted from the Open Archives Initiative - Object Reuse and Exchange (OAI-ORE) project. The OAI-ORE specifications are based on the principles of the Architecture of the World Wide Web, the Semantic Web, and the Linked Data effort. Therefore, their incorporation into the cyberinfrastructure that supports eScholarship will ensure the integration of the products of scholarly research into the Data Web.

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arXiv2009

Automatic Metadata Generation using Associative Networks

In spite of its tremendous value, metadata is generally sparse and incomplete, thereby hampering the effectiveness of digital information services. Many of the existing mechanisms for the automated creation of metadata rely primarily on content analysis which can be costly and inefficient. The automatic metadata generation system proposed in this article leverages resource relationships generated from existing metadata as a medium for propagation from metadata-rich to metadata-poor resources. Because of its independence from content analysis, it can be applied to a wide variety of resource media types and is shown to be computationally inexpensive. The proposed method operates through two distinct phases. Occurrence and co-occurrence algorithms first generate an associative network of repository resources leveraging existing repository metadata. Second, using the associative network as a substrate, metadata associated with metadata-rich resources is propagated to metadata-poor resources by means of a discrete-form spreading activation algorithm. This article discusses the general framework for building associative networks, an algorithm for disseminating metadata through such networks, and the results of an experiment and validation of the proposed method using a standard bibliographic dataset.

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arXiv2009

Everyone is a Curator: Human-Assisted Preservation for ORE Aggregations

The Open Archives Initiative (OAI) has recently created the Object Reuse and Exchange (ORE) project that defines Resource Maps (ReMs) for describing aggregations of web resources. These aggregations are susceptible to many of the same preservation challenges that face other web resources. In this paper, we investigate how the aggregations of web resources can be preserved outside of the typical repository environment and instead rely on the thousands of interactive users in the web community and the Web Infrastructure (the collection of web archives, search engines, and personal archiving services) to facilitate preservation. Inspired by Web 2.0 services such as digg, deli.cio.us, and Yahoo! Buzz, we have developed a lightweight system called ReMember that attempts to harness the collective abilities of the web community for preservation purposes instead of solely placing the burden of curatorial responsibilities on a small number of experts.

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arXiv2008

A Web-Based Resource Model for eScience: Object Reuse & Exchange

Work in the Open Archives Initiative - Object Reuse and Exchange (OAI-ORE) focuses on an important aspect of infrastructure for eScience: the specification of the data model and a suite of implementation standards to identify and describe compound objects. These are objects that aggregate multiple sources of content including text, images, data, visualization tools, and the like. These aggregations are an essential product of eScience, and will become increasingly common in the age of data-driven scholarship. The OAI-ORE specifications conform to the core concepts of the Web architecture and the semantic Web, ensuring that applications that use them will integrate well into the general Web environment.

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arXiv2008

Towards Usage-based Impact Metrics: - First Results from the MESUR Project

Scholarly usage data holds the potential to be used as a tool to study the dynamics of scholarship in real time, and to form the basis for the definition of novel metrics of scholarly impact. However, the formal groundwork to reliably and validly exploit usage data is lacking, and the exact nature, meaning and applicability of usage-based metrics is poorly understood. The MESUR project funded by the Andrew W. Mellon Foundation constitutes a systematic effort to define, validate and cross-validate a range of usage-based metrics of scholarly impact. MESUR has collected nearly 1 billion usage events as well as all associated bibliographic and citation data from significant publishers, aggregators and institutional consortia to construct a large-scale usage data reference set. This paper describes some major challenges related to aggregating and processing usage data, and discusses preliminary results obtained from analyzing the MESUR reference data set. The results confirm the intrinsic value of scholarly usage data, and support the feasibility of reliable and valid usage-based metrics of scholarly impact.

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arXiv2008

Object Re-Use & Exchange: A Resource-Centric Approach

The OAI Object Reuse and Exchange (OAI-ORE) framework recasts the repository-centric notion of digital object to a bounded aggregation of Web resources. In this manner, digital library content is more integrated with the Web architecture, and thereby more accessible to Web applications and clients. This generalized notion of an aggregation that is independent of repository containment conforms more closely with notions in eScience and eScholarship, where content is distributed across multiple services and databases. We provide a motivation for the OAI-ORE project, review previous interoperability efforts, describe draft ORE specifications and report on promising results from early experimentation that illustrate improved interoperability and reuse of digital objects.

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arXiv2008

The aDORe Federation Architecture

The need to federate repositories emerges in two distinctive scenarios. In one scenario, scalability-related problems in the operation of a repository reach a point beyond which continued service requires parallelization and hence federation of the repository infrastructure. In the other scenario, multiple distributed repositories manage collections of interest to certain communities or applications, and federation is an approach to present a unified perspective across these repositories. The high-level, 3-Tier aDORe federation architecture can be used as a guideline to federate repositories in both cases. This paper describes the architecture, consisting of core interfaces for federated repositories in Tier-1, two shared infrastructure components in Tier-2, and a single-point of access to the federation in Tier-3. The paper also illustrates two large-scale deployments of the aDORe federation architecture: the aDORe Archive repository (over 100,000,000 digital objects) at the Los Alamos National Laboratory and the Ghent University Image Repository federation (multiple terabytes of image files).

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arXiv2007

A Practical Ontology for the Large-Scale Modeling of Scholarly Artifacts and their Usage

The large-scale analysis of scholarly artifact usage is constrained primarily by current practices in usage data archiving, privacy issues concerned with the dissemination of usage data, and the lack of a practical ontology for modeling the usage domain. As a remedy to the third constraint, this article presents a scholarly ontology that was engineered to represent those classes for which large-scale bibliographic and usage data exists, supports usage research, and whose instantiation is scalable to the order of 50 million articles along with their associated artifacts (e.g. authors and journals) and an accompanying 1 billion usage events. The real world instantiation of the presented abstract ontology is a semantic network model of the scholarly community which lends the scholarly process to statistical analysis and computational support. We present the ontology, discuss its instantiation, and provide some example inference rules for calculating various scholarly artifact metrics.

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arXiv2006

Usage Impact Factor: the effects of sample characteristics on usage-based impact metrics

There exist ample demonstrations that indicators of scholarly impact analogous to the citation-based ISI Impact Factor can be derived from usage data. However, contrary to the ISI IF which is based on citation data generated by the global community of scholarly authors, so far usage can only be practically recorded at a local level leading to community-specific assessments of scholarly impact that are difficult to generalize to the global scholarly community. We define a journal Usage Impact Factor which mimics the definition of the Thomson Scientific's ISI Impact Factor. Usage Impact Factor rankings are calculated on the basis of a large-scale usage data set recorded for the California State University system from 2003 to 2005. The resulting journal rankings are then compared to Thomson Scientific's ISI Impact Factor which is used as a baseline indicator of general impact. Our results indicate that impact as derived from California State University usage reflects the particular scientific and demographic characteristics of its communities.

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arXiv2006

Pathways: Augmenting interoperability across scholarly repositories

In the emerging eScience environment, repositories of papers, datasets, software, etc., should be the foundation of a global and natively-digital scholarly communications system. The current infrastructure falls far short of this goal. Cross-repository interoperability must be augmented to support the many workflows and value-chains involved in scholarly communication. This will not be achieved through the promotion of single repository architecture or content representation, but instead requires an interoperability framework to connect the many heterogeneous systems that will exist. We present a simple data model and service architecture that augments repository interoperability to enable scholarly value-chains to be implemented. We describe an experiment that demonstrates how the proposed infrastructure can be deployed to implement the workflow involved in the creation of an overlay journal over several different repository systems (Fedora, aDORe, DSpace and arXiv).

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