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Hisham Cholakkal

Publications and source records attributed to Hisham Cholakkal.

At least 37 records · Page 2Linked to original sources

Adapting In-Domain Few-Shot Segmentation to New Domains without Source Domain Retraining

Cross-domain few-shot segmentation (CD-FSS) aims to segment objects of novel classes in new domains, which is often challenging due to the diverse characteristics of target domains and the limited availability of support data. Most CD-FSS methods redesign and retrain in-domain FSS models using abundant base data from the source domain, which are effective but costly to train. To address these issues, we propose adapting informative model structures of the well-trained FSS model for target domains by learning domain characteristics from few-shot labeled support samples during inference, thereby eliminating the need for source domain retraining. Specifically, we first adaptively identify domain-specific model structures by measuring parameter importance using a novel structure Fisher score in a data-dependent manner. Then, we progressively train the selected informative model structures with hierarchically constructed training samples, progressing from fewer to more support shots. The resulting Informative Structure Adaptation (ISA) method effectively addresses domain shifts and equips existing well-trained in-domain FSS models with flexible adaptation capabilities for new domains, eliminating the need to redesign or retrain CD-FSS models on base data. Extensive experiments validate the effectiveness of our method, demonstrating superior performance across multiple CD-FSS benchmarks. Codes are at https://github.com/fanq15/ISA.

cs.CV↗

TAViS: Text-bridged Audio-Visual Segmentation with Foundation Models

Audio-Visual Segmentation (AVS) faces a fundamental challenge of effectively aligning audio and visual modalities. While recent approaches leverage foundation models to address data scarcity, they often rely on single-modality knowledge or combine foundation models in an off-the-shelf manner, failing to address the cross-modal alignment challenge. In this paper, we present TAViS, a novel framework that \textbf{couples} the knowledge of multimodal foundation models (ImageBind) for cross-modal alignment and a segmentation foundation model (SAM2) for precise segmentation. However, effectively combining these models poses two key challenges: the difficulty in transferring the knowledge between SAM2 and ImageBind due to their different feature spaces, and the insufficiency of using only segmentation loss for supervision. To address these challenges, we introduce a text-bridged design with two key components: (1) a text-bridged hybrid prompting mechanism where pseudo text provides class prototype information while retaining modality-specific details from both audio and visual inputs, and (2) an alignment supervision strategy that leverages text as a bridge to align shared semantic concepts within audio-visual modalities. Our approach achieves superior performance on single-source, multi-source, semantic datasets, and excels in zero-shot settings.

cs.CV↗

MedROV: Towards Real-Time Open-Vocabulary Detection Across Diverse Medical Imaging Modalities

Traditional object detection models in medical imaging operate within a closed-set paradigm, limiting their ability to detect objects of novel labels. Open-vocabulary object detection (OVOD) addresses this limitation but remains underexplored in medical imaging due to dataset scarcity and weak text-image alignment. To bridge this gap, we introduce MedROV, the first Real-time Open Vocabulary detection model for medical imaging. To enable open-vocabulary learning, we curate a large-scale dataset, Omnis, with 600K detection samples across nine imaging modalities and introduce a pseudo-labeling strategy to handle missing annotations from multi-source datasets. Additionally, we enhance generalization by incorporating knowledge from a large pre-trained foundation model. By leveraging contrastive learning and cross-modal representations, MedROV effectively detects both known and novel structures. Experimental results demonstrate that MedROV outperforms the previous state-of-the-art foundation model for medical image detection with an average absolute improvement of 40 mAP50, and surpasses closed-set detectors by more than 3 mAP50, while running at 70 FPS, setting a new benchmark in medical detection. Our source code, dataset, and trained model are available at https://github.com/toobatehreem/MedROV.

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CLIMB-3D: Continual Learning for Imbalanced 3D Instance Segmentation

While 3D instance segmentation (3DIS) has advanced significantly, most existing methods assume that all object classes are known in advance and uniformly distributed. However, this assumption is unrealistic in dynamic, real-world environments where new classes emerge gradually and exhibit natural imbalance. Although some approaches address the emergence of new classes, they often overlook class imbalance, which leads to suboptimal performance, particularly on rare categories. To tackle this, we propose \ourmethodbf, a unified framework for \textbf{CL}ass-incremental \textbf{Imb}alance-aware \textbf{3D}IS. Building upon established exemplar replay (ER) strategies, we show that ER alone is insufficient to achieve robust performance under memory constraints. To mitigate this, we introduce a novel pseudo-label generator (PLG) that extends supervision to previously learned categories by leveraging predictions from a frozen model trained on prior tasks. Despite its promise, PLG tends to be biased towards frequent classes. Therefore, we propose a class-balanced re-weighting (CBR) scheme that estimates object frequencies from pseudo-labels and dynamically adjusts training bias, without requiring access to past data. We design and evaluate three incremental scenarios for 3DIS on the challenging ScanNet200 dataset and additionally validate our method for semantic segmentation on ScanNetV2. Our approach achieves state-of-the-art results, surpassing prior work by up to 16.76\% mAP for instance segmentation and approximately 30\% mIoU for semantic segmentation, demonstrating strong generalisation across both frequent and rare classes. Code is available at: https://github.com/vgthengane/CLIMB3D

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BiMediX2: Bio-Medical EXpert LMM for Diverse Medical Modalities

We introduce BiMediX2, a bilingual (Arabic-English) Bio-Medical EXpert Large Multimodal Model that supports text-based and image-based medical interactions. It enables multi-turn conversation in Arabic and English and supports diverse medical imaging modalities, including radiology, CT, and histology. To train BiMediX2, we curate BiMed-V, an extensive Arabic-English bilingual healthcare dataset consisting of 1.6M samples of diverse medical interactions. This dataset supports a range of medical Large Language Model (LLM) and Large Multimodal Model (LMM) tasks, including multi-turn medical conversations, report generation, and visual question answering (VQA). We also introduce BiMed-MBench, the first Arabic-English medical LMM evaluation benchmark, verified by medical experts. BiMediX2 demonstrates excellent performance across multiple medical LLM and LMM benchmarks, achieving state-of-the-art results compared to other open-sourced models. On BiMed-MBench, BiMediX2 outperforms existing methods by over 9% in English and more than 20% in Arabic evaluations. Additionally, it surpasses GPT-4 by approximately 9% in UPHILL factual accuracy evaluations and excels in various medical VQA, report generation, and report summarization tasks. Our trained models, instruction set, and source code are available at https://github.com/mbzuai-oryx/BiMediX2

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Self-Evolving Multi-Agent Simulations for Realistic Clinical Interactions

In this work, we introduce MedAgentSim, an open-source simulated clinical environment with doctor, patient, and measurement agents designed to evaluate and enhance LLM performance in dynamic diagnostic settings. Unlike prior approaches, our framework requires doctor agents to actively engage with patients through multi-turn conversations, requesting relevant medical examinations (e.g., temperature, blood pressure, ECG) and imaging results (e.g., MRI, X-ray) from a measurement agent to mimic the real-world diagnostic process. Additionally, we incorporate self improvement mechanisms that allow models to iteratively refine their diagnostic strategies. We enhance LLM performance in our simulated setting by integrating multi-agent discussions, chain-of-thought reasoning, and experience-based knowledge retrieval, facilitating progressive learning as doctor agents interact with more patients. We also introduce an evaluation benchmark for assessing the LLM's ability to engage in dynamic, context-aware diagnostic interactions. While MedAgentSim is fully automated, it also supports a user-controlled mode, enabling human interaction with either the doctor or patient agent. Comprehensive evaluations in various simulated diagnostic scenarios demonstrate the effectiveness of our approach. Our code, simulation tool, and benchmark are available at \href{https://medagentsim.netlify.app/}.

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A Culturally-diverse Multilingual Multimodal Video Benchmark & Model

Large multimodal models (LMMs) have recently gained attention due to their effectiveness to understand and generate descriptions of visual content. Most existing LMMs are in English language. While few recent works explore multilingual image LMMs, to the best of our knowledge, moving beyond the English language for cultural and linguistic inclusivity is yet to be investigated in the context of video LMMs. In pursuit of more inclusive video LMMs, we introduce a multilingual Video LMM benchmark, named ViMUL-Bench, to evaluate Video LMMs across 14 languages, including both low- and high-resource languages: English, Chinese, Spanish, French, German, Hindi, Arabic, Russian, Bengali, Urdu, Sinhala, Tamil, Swedish, and Japanese. Our ViMUL-Bench is designed to rigorously test video LMMs across 15 categories including eight culturally diverse categories, ranging from lifestyles and festivals to foods and rituals and from local landmarks to prominent cultural personalities. ViMUL-Bench comprises both open-ended (short and long-form) and multiple-choice questions spanning various video durations (short, medium, and long) with 8k samples that are manually verified by native language speakers. In addition, we also introduce a machine translated multilingual video training set comprising 1.2 million samples and develop a simple multilingual video LMM, named ViMUL, that is shown to provide a better tradeoff between high-and low-resource languages for video understanding. We hope our ViMUL-Bench and multilingual video LMM along with a large-scale multilingual video training set will help ease future research in developing cultural and linguistic inclusive multilingual video LMMs. Our proposed benchmark, video LMM and training data will be publicly released at https://mbzuai-oryx.github.io/ViMUL/.

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DEFT: Decompositional Efficient Fine-Tuning for Text-to-Image Models

Efficient fine-tuning of pre-trained Text-to-Image (T2I) models involves adjusting the model to suit a particular task or dataset while minimizing computational resources and limiting the number of trainable parameters. However, it often faces challenges in striking a trade-off between aligning with the target distribution: learning a novel concept from a limited image for personalization and retaining the instruction ability needed for unifying multiple tasks, all while maintaining editability (aligning with a variety of prompts or in-context generation). In this work, we introduce DEFT, Decompositional Efficient Fine-Tuning, an efficient fine-tuning framework that adapts a pre-trained weight matrix by decomposing its update into two components with two trainable matrices: (1) a projection onto the complement of a low-rank subspace spanned by a low-rank matrix, and (2) a low-rank update. The single trainable low-rank matrix defines the subspace, while the other trainable low-rank matrix enables flexible parameter adaptation within that subspace. We conducted extensive experiments on the Dreambooth and Dreambench Plus datasets for personalization, the InsDet dataset for object and scene adaptation, and the VisualCloze dataset for a universal image generation framework through visual in-context learning with both Stable Diffusion and a unified model. Our results demonstrated state-of-the-art performance, highlighting the emergent properties of efficient fine-tuning. Our code is available on \href{https://github.com/MAXNORM8650/DEFT}{DEFTBase}.

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How Good are Foundation Models in Step-by-Step Embodied Reasoning?

Embodied agents operating in the physical world must make decisions that are not only effective but also safe, spatially coherent, and grounded in context. While recent advances in large multimodal models (LMMs) have shown promising capabilities in visual understanding and language generation, their ability to perform structured reasoning for real-world embodied tasks remains underexplored. In this work, we aim to understand how well foundation models can perform step-by-step reasoning in embodied environments. To this end, we propose the Foundation Model Embodied Reasoning (FoMER) benchmark, designed to evaluate the reasoning capabilities of LMMs in complex embodied decision-making scenarios. Our benchmark spans a diverse set of tasks that require agents to interpret multimodal observations, reason about physical constraints and safety, and generate valid next actions in natural language. We present (i) a large-scale, curated suite of embodied reasoning tasks, (ii) a novel evaluation framework that disentangles perceptual grounding from action reasoning, and (iii) empirical analysis of several leading LMMs under this setting. Our benchmark includes over 1.1k samples with detailed step-by-step reasoning across 10 tasks and 8 embodiments, covering three different robot types. Our results highlight both the potential and current limitations of LMMs in embodied reasoning, pointing towards key challenges and opportunities for future research in robot intelligence. Our data and code will be made publicly available.

cs.CV↗

Think Before You Segment: An Object-aware Reasoning Agent for Referring Audio-Visual Segmentation

Referring Audio-Visual Segmentation (Ref-AVS) aims to segment target objects in audible videos based on given reference expressions. Prior works typically rely on learning latent embeddings via multimodal fusion to prompt a tunable SAM/SAM2 decoder for segmentation, which requires strong pixel-level supervision and lacks interpretability. From a novel perspective of explicit reference understanding, we propose TGS-Agent, which decomposes the task into a Think-Ground-Segment process, mimicking the human reasoning procedure by first identifying the referred object through multimodal analysis, followed by coarse-grained grounding and precise segmentation. To this end, we first propose Ref-Thinker, a multimodal language model capable of reasoning over textual, visual, and auditory cues. We construct an instruction-tuning dataset with explicit object-aware think-answer chains for Ref-Thinker fine-tuning. The object description inferred by Ref-Thinker is used as an explicit prompt for Grounding-DINO and SAM2, which perform grounding and segmentation without relying on pixel-level supervision. Additionally, we introduce R\textsuperscript{2}-AVSBench, a new benchmark with linguistically diverse and reasoning-intensive references for better evaluating model generalization. Our approach achieves state-of-the-art results on both standard Ref-AVSBench and proposed R\textsuperscript{2}-AVSBench. Code will be available at https://github.com/jasongief/TGS-Agent.

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HyRet-Change: A hybrid retentive network for remote sensing change detection

Recently convolution and transformer-based change detection (CD) methods provide promising performance. However, it remains unclear how the local and global dependencies interact to effectively alleviate the pseudo changes. Moreover, directly utilizing standard self-attention presents intrinsic limitations including governing global feature representations limit to capture subtle changes, quadratic complexity, and restricted training parallelism. To address these limitations, we propose a Siamese-based framework, called HyRet-Change, which can seamlessly integrate the merits of convolution and retention mechanisms at multi-scale features to preserve critical information and enhance adaptability in complex scenes. Specifically, we introduce a novel feature difference module to exploit both convolutions and multi-head retention mechanisms in a parallel manner to capture complementary information. Furthermore, we propose an adaptive local-global interactive context awareness mechanism that enables mutual learning and enhances discrimination capability through information exchange. We perform experiments on three challenging CD datasets and achieve state-of-the-art performance compared to existing methods. Our source code is publicly available at https://github.com/mustansarfiaz/HyRect-Change.

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InceptionMamba: Efficient Multi-Stage Feature Enhancement with Selective State Space Model for Microscopic Medical Image Segmentation

Accurate microscopic medical image segmentation plays a crucial role in diagnosing various cancerous cells and identifying tumors. Driven by advancements in deep learning, convolutional neural networks (CNNs) and transformer-based models have been extensively studied to enhance receptive fields and improve medical image segmentation task. However, they often struggle to capture complex cellular and tissue structures in challenging scenarios such as background clutter and object overlap. Moreover, their reliance on the availability of large datasets for improved performance, along with the high computational cost, limit their practicality. To address these issues, we propose an efficient framework for the segmentation task, named InceptionMamba, which encodes multi-stage rich features and offers both performance and computational efficiency. Specifically, we exploit semantic cues to capture both low-frequency and high-frequency regions to enrich the multi-stage features to handle the blurred region boundaries (e.g., cell boundaries). These enriched features are input to a hybrid model that combines an Inception depth-wise convolution with a Mamba block, to maintain high efficiency and capture inherent variations in the scales and shapes of the regions of interest. These enriched features along with low-resolution features are fused to get the final segmentation mask. Our model achieves state-of-the-art performance on two challenging microscopic segmentation datasets (SegPC21 and GlaS) and two skin lesion segmentation datasets (ISIC2017 and ISIC2018), while reducing computational cost by about 5 times compared to the previous best performing method.

cs.CV↗

Fann or Flop: A Multigenre, Multiera Benchmark for Arabic Poetry Understanding in LLMs

Arabic poetry is one of the richest and most culturally rooted forms of expression in the Arabic language, known for its layered meanings, stylistic diversity, and deep historical continuity. Although large language models (LLMs) have demonstrated strong performance across languages and tasks, their ability to understand Arabic poetry remains largely unexplored. In this work, we introduce \emph{Fann or Flop}, the first benchmark designed to assess the comprehension of Arabic poetry by LLMs in 12 historical eras, covering 14 core poetic genres and a variety of metrical forms, from classical structures to contemporary free verse. The benchmark comprises a curated corpus of poems with explanations that assess semantic understanding, metaphor interpretation, prosodic awareness, and cultural context. We argue that poetic comprehension offers a strong indicator for testing how good the LLM understands classical Arabic through Arabic poetry. Unlike surface-level tasks, this domain demands deeper interpretive reasoning and cultural sensitivity. Our evaluation of state-of-the-art LLMs shows that most models struggle with poetic understanding despite strong results on standard Arabic benchmarks. We release "Fann or Flop" along with the evaluation suite as an open-source resource to enable rigorous evaluation and advancement for Arabic language models. Code is available at: https://github.com/mbzuai-oryx/FannOrFlop.

cs.CL↗

ARB: A Comprehensive Arabic Multimodal Reasoning Benchmark

As Large Multimodal Models (LMMs) become more capable, there is growing interest in evaluating their reasoning processes alongside their final outputs. However, most benchmarks remain focused on English, overlooking languages with rich linguistic and cultural contexts, such as Arabic. To address this gap, we introduce the Comprehensive Arabic Multimodal Reasoning Benchmark (ARB), the first benchmark designed to evaluate step-by-step reasoning in Arabic across both textual and visual modalities. ARB spans 11 diverse domains, including visual reasoning, document understanding, OCR, scientific analysis, and cultural interpretation. It comprises 1,356 multimodal samples paired with 5,119 human-curated reasoning steps and corresponding actions. We evaluated 12 state-of-the-art open- and closed-source LMMs and found persistent challenges in coherence, faithfulness, and cultural grounding. ARB offers a structured framework for diagnosing multimodal reasoning in underrepresented languages and marks a critical step toward inclusive, transparent, and culturally aware AI systems. We release the benchmark, rubric, and evaluation suit to support future research and reproducibility. Code available at: https://github.com/mbzuai-oryx/ARB

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Open-Set Semi-Supervised Learning for Long-Tailed Medical Datasets

Many practical medical imaging scenarios include categories that are under-represented but still crucial. The relevance of image recognition models to real-world applications lies in their ability to generalize to these rare classes as well as unseen classes. Real-world generalization requires taking into account the various complexities that can be encountered in the real-world. First, training data is highly imbalanced, which may lead to model exhibiting bias toward the more frequently represented classes. Moreover, real-world data may contain unseen classes that need to be identified, and model performance is affected by the data scarcity. While medical image recognition has been extensively addressed in the literature, current methods do not take into account all the intricacies in the real-world scenarios. To this end, we propose an open-set learning method for highly imbalanced medical datasets using a semi-supervised approach. Understanding the adverse impact of long-tail distribution at the inherent model characteristics, we implement a regularization strategy at the feature level complemented by a classifier normalization technique. We conduct extensive experiments on the publicly available datasets, ISIC2018, ISIC2019, and TissueMNIST with various numbers of labelled samples. Our analysis shows that addressing the impact of long-tail data in classification significantly improves the overall performance of the network in terms of closed-set and open-set accuracies on all datasets. Our code and trained models will be made publicly available at https://github.com/Daniyanaj/OpenLTR.

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XrayGPT: Chest Radiographs Summarization using Medical Vision-Language Models

The latest breakthroughs in large vision-language models, such as Bard and GPT-4, have showcased extraordinary abilities in performing a wide range of tasks. Such models are trained on massive datasets comprising billions of public image-text pairs with diverse tasks. However, their performance on task-specific domains, such as radiology, is still under-investigated and potentially limited due to a lack of sophistication in understanding biomedical images. On the other hand, conversational medical models have exhibited remarkable success but have mainly focused on text-based analysis. In this paper, we introduce XrayGPT, a novel conversational medical vision-language model that can analyze and answer open-ended questions about chest radiographs. Specifically, we align both medical visual encoder (MedClip) with a fine-tuned large language model (Vicuna), using a simple linear transformation. This alignment enables our model to possess exceptional visual conversation abilities, grounded in a deep understanding of radiographs and medical domain knowledge. To enhance the performance of LLMs in the medical context, we generate ~217k interactive and high-quality summaries from free-text radiology reports. These summaries serve to enhance the performance of LLMs through the fine-tuning process. Our approach opens up new avenues the research for advancing the automated analysis of chest radiographs. Our open-source demos, models, and instruction sets are available at: https://github.com/mbzuai-oryx/XrayGPT.

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All Languages Matter: Evaluating LMMs on Culturally Diverse 100 Languages

Existing Large Multimodal Models (LMMs) generally focus on only a few regions and languages. As LMMs continue to improve, it is increasingly important to ensure they understand cultural contexts, respect local sensitivities, and support low-resource languages, all while effectively integrating corresponding visual cues. In pursuit of culturally diverse global multimodal models, our proposed All Languages Matter Benchmark (ALM-bench) represents the largest and most comprehensive effort to date for evaluating LMMs across 100 languages. ALM-bench challenges existing models by testing their ability to understand and reason about culturally diverse images paired with text in various languages, including many low-resource languages traditionally underrepresented in LMM research. The benchmark offers a robust and nuanced evaluation framework featuring various question formats, including true/false, multiple choice, and open-ended questions, which are further divided into short and long-answer categories. ALM-bench design ensures a comprehensive assessment of a model's ability to handle varied levels of difficulty in visual and linguistic reasoning. To capture the rich tapestry of global cultures, ALM-bench carefully curates content from 13 distinct cultural aspects, ranging from traditions and rituals to famous personalities and celebrations. Through this, ALM-bench not only provides a rigorous testing ground for state-of-the-art open and closed-source LMMs but also highlights the importance of cultural and linguistic inclusivity, encouraging the development of models that can serve diverse global populations effectively. Our benchmark is publicly available.

cs.CV↗

CLIP meets DINO for Tuning Zero-Shot Classifier using Unlabeled Image Collections

In the era of foundation models, CLIP has emerged as a powerful tool for aligning text & visual modalities into a common embedding space. However, the alignment objective used to train CLIP often results in subpar visual features for fine-grained tasks. In contrast, SSL-pretrained models like DINO excel at extracting rich visual features due to their specialized training paradigm. Yet, these SSL models require an additional supervised linear probing step, which relies on fully labeled data which is often expensive and difficult to obtain at scale. In this paper, we propose a label-free prompt-tuning method that leverages the rich visual features of self-supervised learning models (DINO) and the broad textual knowledge of large language models (LLMs) to largely enhance CLIP-based image classification performance using unlabeled images. Our approach unfolds in three key steps: (1) We generate robust textual feature embeddings that more accurately represent object classes by leveraging class-specific descriptions from LLMs, enabling more effective zero-shot classification compared to CLIP's default name-specific prompts. (2) These textual embeddings are then used to produce pseudo-labels to train an alignment module that integrates the complementary strengths of LLM description-based textual embeddings & DINO's visual features. (3) Finally, we prompt-tune CLIP's vision encoder through DINO-assisted supervision using the trained alignment module. This three-step process allows us to harness the best of visual & textual foundation models, resulting in a powerful and efficient approach that surpasses state-of-the-art label-free classification methods. Notably, our framework, NoLA (No Labels Attached), achieves an average absolute gain of 3.6% over the state-of-the-art LaFTer across 11 diverse image classification datasets. Our code & models can be found at https://github.com/fazliimam/NoLA.

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