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Hossein Peyvandi

Publications and source records attributed to Hossein Peyvandi.

2 recordsLinked to original sources

A Bayes-Markov Neuromorphic Model of Cortical Orientation Selectivity: A Computational Re-implementation and Quantitative Simulation Study

The emergence of orientation selectivity in the primary visual cortex (V1) remains a central question in computational neuroscience. Shirazi's Bayes-Markov model proposed a probabilistic explanation for how orientation-selective inhibition can arise from non-oriented lateral geniculate nucleus (LGN) inputs through local inference. In that formulation, the activity pattern of striate cortical inhibitory (SCI) cells is estimated from the LGN activity pattern by a maximum a posteriori (MAP) criterion over a two-layer hierarchical Markov random field, and the resulting inference is implemented through a local parallel relaxation algorithm. We provide a computationally explicit re-implementation and quantitative simulation study of this framework. We reconstruct the mathematical model, describe its fully LGN-driven update rule, and implement a vectorized simulation framework that preserves the original local clique operations while making systematic parameter sweeps feasible. We evaluate the model using orientation tuning curves, an orientation selectivity index (OSI), controlled LGN noise perturbations, contrast tests, and model-variant comparisons. We further add a spiking SCI-layer realization using leaky integrate-and-fire and Hodgkin-Huxley neurons to examine whether the rate-coded SCI field can be expressed through temporally explicit neural activity. The simulations support the central qualitative behavior of the Bayes-Markov framework: sharp orientation selectivity, robustness to moderate LGN noise, and a biologically interpretable proof-of-concept spiking realization of the inferred inhibitory field.

q-bio.NC

Pretraining Transformer-Based Models on Diffusion-Generated Synthetic Graphs for Alzheimer's Disease Prediction

Early and accurate detection of Alzheimer's disease (AD) is crucial for enabling timely intervention and improving outcomes. However, developing reliable machine learning (ML) models for AD diagnosis is challenging due to limited labeled data, multi-site heterogeneity, and class imbalance. We propose a Transformer-based diagnostic framework that combines diffusion-based synthetic data generation with graph representation learning and transfer learning. A class-conditional denoising diffusion probabilistic model (DDPM) is trained on the real-world NACC dataset to generate a large synthetic cohort that mirrors multimodal clinical and neuroimaging feature distributions while balancing diagnostic classes. Modality-specific Graph Transformer encoders are first pretrained on this synthetic data to learn robust, class-discriminative representations and are then frozen while a neural classifier is trained on embeddings from the original NACC data. We quantify distributional alignment between real and synthetic cohorts using metrics such as Maximum Mean Discrepancy (MMD), Frechet distance, and energy distance, and complement discrimination metrics with calibration and fixed-specificity sensitivity analyses. Empirically, our framework outperforms standard baselines, including early and late fusion deep neural networks and the multimodal graph-based model MaGNet, yielding higher AUC, accuracy, sensitivity, and specificity under subject-wise cross-validation on NACC. These results show that diffusion-based synthetic pretraining with Graph Transformers can improve generalization in low-sample, imbalanced clinical prediction settings.

cs.LG