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Ilknur Turkmen

Publications and source records attributed to Ilknur Turkmen.

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Benchmarking Vision-Language Models for Automated Pathology Diagnosis and Report Generation

The rapid advancement of vision-language models (VLMs) has accelerated progress in computational pathology; however, whole-slide image (WSI)-based pathology report generation remains limited by the scarcity of large-scale WSI--report datasets and the complexity of mapping spatially distributed visual patterns to structured clinical text. To address this, we introduce a clinically curated Pan-Asia WSI--report dataset of approximately 10,500 pairs from five institutions and establish the REG 2025 benchmark through a MICCAI challenge for systematic evaluation of multimodal models. We analyze submitted methods spanning pretrained VLMs, multiple-instance learning frameworks, hierarchical expert models, retrieval-augmented generation, and cross-modal Transformers. Rather than indicating that VLM use alone was sufficient for superior performance, the results suggest that top-performing methods benefited from structured report representations, hierarchical diagnostic decomposition, and effective multimodal grounding. We identify key limitations, including instability in quantitative attribute estimation (e.g., numeric hallucination) and a tendency toward diagnostic overspecification, with some errors resembling known diagnostic pitfalls in routine pathology. These findings establish REG 2025 as a benchmark for evaluating WSI-based structured report generation and vision-language understanding in computational pathology, providing insights for the design of clinically grounded multimodal pathology models.

cs.CV

A Whole Slide Image Grading Benchmark and Tissue Classification for Cervical Cancer Precursor Lesions with Inter-Observer Variability

The cervical cancer developing from the precancerous lesions caused by the Human Papilloma Virus (HPV) has been one of the preventable cancers with the help of periodic screening. There are two types of grading conventions widely accepted among pathologists. On the other hand, inter-observer variability is an important issue for final diagnosis. In this paper, a whole-slide image grading benchmark for cervical cancer precursor lesions is introduced. The papillae of the cervical epithelium and overlapping cell problems are handled and a tissue classification method with a novel morphological feature exploiting the relative orientation between the BM and the major axis of all nuclei is developed and its performance is evaluated. Besides, the inter-observer variability is also revealed by a thorough comparison among pathologists' decisions, as well as, the final diagnosis.

cs.CV