arXiv subjects

Ioannis G. Tollis

Publications and source records attributed to Ioannis G. Tollis.

17 recordsLinked to original sources

arXiv2025

Tangling and Untangling Trees on Point-sets

We study a question that lies at the intersection of classical research subjects in Topological Graph Theory and Graph Drawing: Computing a drawing of a graph with a prescribed number of crossings on a given set $S$ of points, while ensuring that its curve complexity (i.e., maximum number of bends per edge) is bounded by a constant. We focus on trees: Let $T$ be a tree, $\vartheta(T)$ be its thrackle number, and $χ$ be any integer in the interval $[0,\vartheta(T)]$. In the tangling phase we compute a topological linear embedding of $T$ with $\vartheta(T)$ edge crossings and a constant number of spine traversals. In the untangling phase we remove edge crossings without increasing the spine traversals until we reach $χ$ crossings. The computed linear embedding is used to construct a drawing of $T$ on $S$ with $χ$ crossings and constant curve complexity. Our approach gives rise to an $O(n^2)$-time algorithm for general trees and an $O(n \log n)$-time algorithm for paths. We also adapt the approach to compute RAC drawings, i.e. drawings where the angles formed at edge crossings are $\fracπ{2}$.

cs.CG↗

arXiv2025

Unit Edge-Length Rectilinear Drawings with Crossings and Rectangular Faces

Unit edge-length drawings, rectilinear drawings (where each edge is either a horizontal or a vertical segment), and rectangular face drawings are among the most studied subjects in Graph Drawing. However, most of the literature on these topics refers to planar graphs and planar drawings. In this paper we study drawings with all the above nice properties but that can have edge crossings; we call them Unit Edge length Rectilinear drawings with Rectangular Faces (UER-RF drawings). We consider crossings as dummy vertices and apply the unit edge-length convention to the edge segments connecting any two (real or dummy) vertices. Note that UER-RF drawings are grid drawings (vertices are placed at distinct integer coordinates), which is another classical requirement of graph visualizations. We present several efficient and easily implementable algorithms for recognizing graphs that admit UER-RF drawings and for constructing such drawings if they exist. We consider restrictions on the degree of the vertices or on the size of the faces. For each type of restriction, we consider both the general unconstrained setting and a setting in which either the external boundary of the drawing is fixed or the rotation system of the graph is fixed as part of the input.

cs.CG↗

arXiv2024

Weakly Leveled Planarity with Bounded Span

This paper studies planar drawings of graphs in which each vertex is represented as a point along a sequence of horizontal lines, called levels, and each edge is either a horizontal segment or a strictly $y$-monotone curve. A graph is $s$-span weakly leveled planar if it admits such a drawing where the edges have span at most $s$; the span of an edge is the number of levels it touches minus one. We investigate the problem of computing $s$-span weakly leveled planar drawings from both the computational and the combinatorial perspectives. We prove the problem to be para-NP-hard with respect to its natural parameter $s$ and investigate its complexity with respect to widely used structural parameters. We show the existence of a polynomial-size kernel with respect to vertex cover number and prove that the problem is FPT when parameterized by treedepth. We also present upper and lower bounds on the span for various graph classes. Notably, we show that cycle trees, a family of $2$-outerplanar graphs generalizing Halin graphs, are $Θ(\log n)$-span weakly leveled planar and $4$-span weakly leveled planar when $3$-connected. As a byproduct of these combinatorial results, we obtain improved bounds on the edge-length ratio of the graph families under consideration.

cs.CG↗

arXiv2022

Fast and Practical DAG Decomposition with Reachability Applications

We present practical linear and almost linear-time algorithms to compute a chain decomposition of a directed acyclic graph (DAG), $G=(V,E)$. The number of vertex-disjoint chains computed is very close to the minimum. The time complexity of our algorithm is $O(|E|+c*l)$, where $c$ is the number of path concatenations and $l$ is the length of a longest path of the graph. We give a comprehensive explanation on factors $c$ and $l$ in the following sections. Our techniques have important applications in many areas, including the design of faster practical transitive closure algorithms. We observe that $|E_{red}|\leq width*|V|$ ($E_{red}$: non-transitive edges) and show how to find a substantially large subset of $E_{tr}$ (transitive edges) using a chain decomposition in linear time, without calculating the transitive closure. Our extensive experimental results show the interplay between the width, $E_{red}$, $E_{tr}$ in various models of graphs. We show how to compute a reachability indexing scheme in $O(k_c*|E_{red}|)$ time, where $k_c$ is the number of chains and $|E_{red}|$ is the number of non-transitive edges. This scheme can answer reachabilitiy queries in constant time. The space complexity of the scheme is $O(k_c*|V|)$. The experimental results reveal that our methods are even better in practice than the theoretical bounds imply, indicating how fast chain decomposition algorithms can be applied to the transitive closure problem.

cs.DS↗

arXiv2022

Experiments and a User Study for Hierarchical Drawings of Graphs

We present experimental results and a user study for hierarchical drawings of graphs. A detailed hierarchical graph drawing technique that is based on the Path Based Framework (PBF) is presented. Extensive edge bundling is applied to draw all edges of the graph and the height of the drawing is minimized using compaction. The drawings produced by this framework are compared to drawings produced by the well known Sugiyama framework in terms of area, number of bends, number of crossings, and execution time. The new algorithm runs very fast and produces drawings that are readable and efficient. Since there are advantages (and disadvantages) to both frameworks, we performed a user study and the results show that the drawings produced by the new framework are well received in terms of clarity, readability, and usability. Hence, the new technique offers an interesting alternative to drawing hierarchical graphs, and is especially useful in applications where user defined paths are important and need to be highlighted.

cs.HC↗

arXiv2022

Computing a Feedback Arc Set Using PageRank

We present a new heuristic algorithm for computing a minimum Feedback Arc Set in directed graphs. The new technique produces solutions that are better than the ones produced by the best previously known heuristics, often reducing the FAS size by more than 50%. It is based on computing the PageRank score of the nodes of the directed line graph of the input directed graph. Although the time required by our heuristic is heavily influenced by the size of the produced line graph, our experimental results show that it runs very fast even for very large graphs used in graph drawing.

cs.DS↗

arXiv2022

Computing Weak Dominance Drawings with Minimum Number of Fips

A weak dominance drawing $Γ$ of a DAG $G=(V,E)$, is a $d$-dimensional drawing such that there is a directed path from a vertex $u$ to a vertex $v$ in $G$ if $D(u) <D(v)$ for every dimension $D$ of $Γ$. We have a \emph{falsely implied path (fip)} when $D(u) < D(v)$ for every dimension $D$ of~$Γ$, but there is no path from $u$ to $v$. Minimizing the number of fips is an important theoretical and practical problem, which is NP-hard. We show that it is an FPT~problem for parameter $k$, where $k$ is the maximum degree of a vertex of the \emph{modular~decomposition~tree} of~$G$. Namely, for any constant $d$, we present an $O(nm+ndk^2(k!)^d)$ time algorithm to compute a weak $d$-dimensional dominance drawing $Γ$ of a DAG $G$ having the minimum number of fips. An interesting implication of this result is that we can decide if a DAG has dominance dimension~$3$ (a well-known NP-complete problem) in time $O(nm+nk^2(k!)^3)$.

cs.DS↗

arXiv2020

Algorithms and Experiments Comparing Two Hierarchical Drawing Frameworks

We present algorithms that extend the path-based hierarchical drawing framework and give experimental results. Our algorithms run in $O(km)$ time, where $k$ is the number of paths and $m$ is the number of edges of the graph, and provide better upper bounds than the original path based framework: e.g., the height of the resulting drawings is equal to the length of the longest path of $G$, instead of $n-1$, where $n$ is the number of nodes. Additionally, we extend this framework, by bundling and drawing all the edges of the DAG in $O(m + n \log n)$ time, using minimum extra width per path. We also provide some comparison to a well known hierarchical drawing framework, widely known as the Sugiyama framework, as a proof of concept. The experimental results show that our algorithms produce drawings that are better in area and number of bends, but worse for crossings in sparse graphs. Hence, our technique offers an interesting alternative for drawing hierarchical graphs. Finally, we present an $O(m + k \log k)$ time algorithm that computes a specific order of the paths in order to reduce the total edge length and number of crossings and bends.

cs.DS↗

arXiv2019

Adventures in Abstraction: Reachability in Hierarchical Drawings

We present algorithms and experiments for the visualization of directed graphs that focus on displaying their reachability information. Our algorithms are based on the concepts of the path and channel decomposition as proposed in the framework presented in GD 2018 (pp. 579-592) and focus on showing the existence of paths clearly. In this paper we customize these concepts and present experimental results that clearly show the interplay between bends, crossings and clarity. Additionally, our algorithms have direct applications to the important problem of showing and storing transitivity information of very large graphs and databases. Only a subset of the edges is drawn, thus reducing the visual complexity of the resulting drawing, and the memory requirements for storing the transitivity information. Our algorithms require almost linear time, $O(kn+m)$, where $k$ is the number of paths/channels, $n$ and $m$ is the number of vertices and edges, respectively. They produce progressively more abstract drawings of the input graph. No dummy vertices are introduced and the vertices of each path/channel are vertically aligned.

cs.DS↗

arXiv2019

Multidimensional Dominance Drawings

Let $G$ be a DAG with $n$ vertices and $m$ edges. Two vertices $u,v$ are incomparable if $u$ doesn't reach $v$ and vice versa. We denote by \emph{width} of a DAG $G$, $w_G$, the maximum size of a set of incomparable vertices of $G$. In this paper we present an algorithm that computes a dominance drawing of a DAG G in $k$ dimensions, where $w_G \le k \le \frac{n}{2}$. The time required by the algorithm is $O(kn)$, with a precomputation time of $O(km)$, needed to compute a \emph{compressed transitive closure} of $G$, and extra $O(n^2w_G)$ or $O(n^3)$ time, if we want $k=w_G$. Our algorithm gives a tighter bound to the dominance dimension of a DAG. As corollaries, a new family of graphs having a 2-dimensional dominance drawing and a new upper bound to the dimension of a partial order are obtained. We also introduce the concept of transitive module and dimensional neck, $w_N$, of a DAG $G$ and we show how to improve the results given previously using these concepts.

cs.DS↗

arXiv2018

Algorithms and Bounds for Drawing Directed Graphs

In this paper we present a new approach to visualize directed graphs and their hierarchies that completely departs from the classical four-phase framework of Sugiyama and computes readable hierarchical visualizations that contain the complete reachability information of a graph. Additionally, our approach has the advantage that only the necessary edges are drawn in the drawing, thus reducing the visual complexity of the resulting drawing. Furthermore, most problems involved in our framework require only polynomial time. Our framework offers a suite of solutions depending upon the requirements, and it consists of only two steps: (a) the cycle removal step (if the graph contains cycles) and (b) the channel decomposition and hierarchical drawing step. Our framework does not introduce any dummy vertices and it keeps the vertices of a channel vertically aligned. The time complexity of the main drawing algorithms of our framework is $O(kn)$, where $k$ is the number of channels, typically much smaller than $n$ (the number of vertices).

cs.DS↗

arXiv2017

Planar L-Drawings of Directed Graphs

We study planar drawings of directed graphs in the L-drawing standard. We provide necessary conditions for the existence of these drawings and show that testing for the existence of a planar L-drawing is an NP-complete problem. Motivated by this result, we focus on upward-planar L-drawings. We show that directed st-graphs admitting an upward- (resp. upward-rightward-) planar L-drawing are exactly those admitting a bitonic (resp. monotonically increasing) st-ordering. We give a linear-time algorithm that computes a bitonic (resp. monotonically increasing) st-ordering of a planar st-graph or reports that there exists none.

cs.DS↗

arXiv2016

Algorithms for Visualizing Phylogenetic Networks

We study the problem of visualizing phylogenetic networks, which are extensions of the Tree of Life in biology. We use a space filling visualization method, called DAGmaps, in order to obtain clear visualizations using limited space. In this paper, we restrict our attention to galled trees and galled networks and present linear time algorithms for visualizing them as DAGmaps.

cs.DS↗

arXiv2015

L-Drawings of Directed Graphs

We introduce L-drawings, a novel paradigm for representing directed graphs aiming at combining the readability features of orthogonal drawings with the expressive power of matrix representations. In an L-drawing, vertices have exclusive $x$- and $y$-coordinates and edges consist of two segments, one exiting the source vertically and one entering the destination horizontally. We study the problem of computing L-drawings using minimum ink. We prove its NP-completeness and provide a heuristics based on a polynomial-time algorithm that adds a vertex to a drawing using the minimum additional ink. We performed an experimental analysis of the heuristics which confirms its effectiveness.

cs.DS↗

arXiv2014

Algorithms and Bounds for Drawing Non-planar Graphs with Crossing-free Subgraphs

We initiate the study of the following problem: Given a non-planar graph G and a planar subgraph S of G, does there exist a straight-line drawing Γ of G in the plane such that the edges of S are not crossed in Γ by any edge of G? We give positive and negative results for different kinds of connected spanning subgraphs S of G. Moreover, in order to enlarge the subset of instances that admit a solution, we consider the possibility of bending the edges of G not in S; in this setting we discuss different trade-offs between the number of bends and the required drawing area.

cs.CG↗

arXiv2014

Properties and Complexity of Fan-Planarity

In a \emph{fan-planar drawing} of a graph an edge can cross only edges with a common end-vertex. Fan-planar drawings have been recently introduced by Kaufmann and Ueckerdt, who proved that every $n$-vertex fan-planar drawing has at most $5n-10$ edges, and that this bound is tight for $n \geq 20$. We extend their result, both from the combinatorial and the algorithmic point of view. We prove tight bounds on the density of constrained versions of fan-planar drawings and study the relationship between fan-planarity and $k$-planarity. Furthermore, we prove that deciding whether a graph admits a fan-planar drawing in the variable embedding setting is NP-complete.

cs.CG↗

arXiv2011

Weak Dominance Drawings and Linear Extension Diameter

We introduce the problem of Weak Dominance Drawing for general directed acyclic graphs and we show the connection with the linear extension diameter of a partial order P. We present complexity results and bounds.

cs.DS↗