arXiv subjects

Irwin King

Publications and source records attributed to Irwin King.

At least 145 records · Page 8Linked to original sources

arXiv2023

Think Rationally about What You See: Continuous Rationale Extraction for Relation Extraction

Relation extraction (RE) aims to extract potential relations according to the context of two entities, thus, deriving rational contexts from sentences plays an important role. Previous works either focus on how to leverage the entity information (e.g., entity types, entity verbalization) to inference relations, but ignore context-focused content, or use counterfactual thinking to remove the model's bias of potential relations in entities, but the relation reasoning process will still be hindered by irrelevant content. Therefore, how to preserve relevant content and remove noisy segments from sentences is a crucial task. In addition, retained content needs to be fluent enough to maintain semantic coherence and interpretability. In this work, we propose a novel rationale extraction framework named RE2, which leverages two continuity and sparsity factors to obtain relevant and coherent rationales from sentences. To solve the problem that the gold rationales are not labeled, RE2 applies an optimizable binary mask to each token in the sentence, and adjust the rationales that need to be selected according to the relation label. Experiments on four datasets show that RE2 surpasses baselines.

cs.CL↗

arXiv2023

Bipartite Graph Convolutional Hashing for Effective and Efficient Top-N Search in Hamming Space

Searching on bipartite graphs is basal and versatile to many real-world Web applications, e.g., online recommendation, database retrieval, and query-document searching. Given a query node, the conventional approaches rely on the similarity matching with the vectorized node embeddings in the continuous Euclidean space. To efficiently manage intensive similarity computation, developing hashing techniques for graph structured data has recently become an emerging research direction. Despite the retrieval efficiency in Hamming space, prior work is however confronted with catastrophic performance decay. In this work, we investigate the problem of hashing with Graph Convolutional Network on bipartite graphs for effective Top-N search. We propose an end-to-end Bipartite Graph Convolutional Hashing approach, namely BGCH, which consists of three novel and effective modules: (1) adaptive graph convolutional hashing, (2) latent feature dispersion, and (3) Fourier serialized gradient estimation. Specifically, the former two modules achieve the substantial retention of the structural information against the inevitable information loss in hash encoding; the last module develops Fourier Series decomposition to the hashing function in the frequency domain mainly for more accurate gradient estimation. The extensive experiments on six real-world datasets not only show the performance superiority over the competing hashing-based counterparts, but also demonstrate the effectiveness of all proposed model components contained therein.

cs.IR↗

arXiv2023

Encoded Gradients Aggregation against Gradient Leakage in Federated Learning

Federated learning enables isolated clients to train a shared model collaboratively by aggregating the locally-computed gradient updates. However, privacy information could be leaked from uploaded gradients and be exposed to malicious attackers or an honest-but-curious server. Although the additive homomorphic encryption technique guarantees the security of this process, it brings unacceptable computation and communication burdens to FL participants. To mitigate this cost of secure aggregation and maintain the learning performance, we propose a new framework called Encoded Gradient Aggregation (\emph{EGA}). In detail, EGA first encodes local gradient updates into an encoded domain with injected noises in each client before the aggregation in the server. Then, the encoded gradients aggregation results can be recovered for the global model update via a decoding function. This scheme could prevent the raw gradients of a single client from exposing on the internet and keep them unknown to the server. EGA could provide optimization and communication benefits under different noise levels and defend against gradient leakage. We further provide a theoretical analysis of the approximation error and its impacts on federated optimization. Moreover, EGA is compatible with the most federated optimization algorithms. We conduct intensive experiments to evaluate EGA in real-world federated settings, and the results have demonstrated its efficacy.

cs.CR↗

arXiv2023

A Survey of Trustworthy Federated Learning with Perspectives on Security, Robustness, and Privacy

Trustworthy artificial intelligence (AI) technology has revolutionized daily life and greatly benefited human society. Among various AI technologies, Federated Learning (FL) stands out as a promising solution for diverse real-world scenarios, ranging from risk evaluation systems in finance to cutting-edge technologies like drug discovery in life sciences. However, challenges around data isolation and privacy threaten the trustworthiness of FL systems. Adversarial attacks against data privacy, learning algorithm stability, and system confidentiality are particularly concerning in the context of distributed training in federated learning. Therefore, it is crucial to develop FL in a trustworthy manner, with a focus on security, robustness, and privacy. In this survey, we propose a comprehensive roadmap for developing trustworthy FL systems and summarize existing efforts from three key aspects: security, robustness, and privacy. We outline the threats that pose vulnerabilities to trustworthy federated learning across different stages of development, including data processing, model training, and deployment. To guide the selection of the most appropriate defense methods, we discuss specific technical solutions for realizing each aspect of Trustworthy FL (TFL). Our approach differs from previous work that primarily discusses TFL from a legal perspective or presents FL from a high-level, non-technical viewpoint.

cs.LG↗

arXiv2023

Discrete-time Temporal Network Embedding via Implicit Hierarchical Learning in Hyperbolic Space

Representation learning over temporal networks has drawn considerable attention in recent years. Efforts are mainly focused on modeling structural dependencies and temporal evolving regularities in Euclidean space which, however, underestimates the inherent complex and hierarchical properties in many real-world temporal networks, leading to sub-optimal embeddings. To explore these properties of a complex temporal network, we propose a hyperbolic temporal graph network (HTGN) that fully takes advantage of the exponential capacity and hierarchical awareness of hyperbolic geometry. More specially, HTGN maps the temporal graph into hyperbolic space, and incorporates hyperbolic graph neural network and hyperbolic gated recurrent neural network, to capture the evolving behaviors and implicitly preserve hierarchical information simultaneously. Furthermore, in the hyperbolic space, we propose two important modules that enable HTGN to successfully model temporal networks: (1) hyperbolic temporal contextual self-attention (HTA) module to attend to historical states and (2) hyperbolic temporal consistency (HTC) module to ensure stability and generalization. Experimental results on multiple real-world datasets demonstrate the superiority of HTGN for temporal graph embedding, as it consistently outperforms competing methods by significant margins in various temporal link prediction tasks. Specifically, HTGN achieves AUC improvement up to 9.98% for link prediction and 11.4% for new link prediction. Moreover, the ablation study further validates the representational ability of hyperbolic geometry and the effectiveness of the proposed HTA and HTC modules.

cs.SI↗

arXiv2023

Drug Synergistic Combinations Predictions via Large-Scale Pre-Training and Graph Structure Learning

Drug combination therapy is a well-established strategy for disease treatment with better effectiveness and less safety degradation. However, identifying novel drug combinations through wet-lab experiments is resource intensive due to the vast combinatorial search space. Recently, computational approaches, specifically deep learning models have emerged as an efficient way to discover synergistic combinations. While previous methods reported fair performance, their models usually do not take advantage of multi-modal data and they are unable to handle new drugs or cell lines. In this study, we collected data from various datasets covering various drug-related aspects. Then, we take advantage of large-scale pre-training models to generate informative representations and features for drugs, proteins, and diseases. Based on that, a message-passing graph is built on top to propagate information together with graph structure learning flexibility. This is first introduced in the biological networks and enables us to generate pseudo-relations in the graph. Our framework achieves state-of-the-art results in comparison with other deep learning-based methods on synergistic prediction benchmark datasets. We are also capable of inferencing new drug combination data in a test on an independent set released by AstraZeneca, where 10% of improvement over previous methods is observed. In addition, we're robust against unseen drugs and surpass almost 15% AU ROC compared to the second-best model. We believe our framework contributes to both the future wet-lab discovery of novel drugs and the building of promising guidance for precise combination medicine.

cs.LG↗

arXiv2022

Spectral Feature Augmentation for Graph Contrastive Learning and Beyond

Although augmentations (e.g., perturbation of graph edges, image crops) boost the efficiency of Contrastive Learning (CL), feature level augmentation is another plausible, complementary yet not well researched strategy. Thus, we present a novel spectral feature argumentation for contrastive learning on graphs (and images). To this end, for each data view, we estimate a low-rank approximation per feature map and subtract that approximation from the map to obtain its complement. This is achieved by the proposed herein incomplete power iteration, a non-standard power iteration regime which enjoys two valuable byproducts (under mere one or two iterations): (i) it partially balances spectrum of the feature map, and (ii) it injects the noise into rebalanced singular values of the feature map (spectral augmentation). For two views, we align these rebalanced feature maps as such an improved alignment step can focus more on less dominant singular values of matrices of both views, whereas the spectral augmentation does not affect the spectral angle alignment (singular vectors are not perturbed). We derive the analytical form for: (i) the incomplete power iteration to capture its spectrum-balancing effect, and (ii) the variance of singular values augmented implicitly by the noise. We also show that the spectral augmentation improves the generalization bound. Experiments on graph/image datasets show that our spectral feature augmentation outperforms baselines, and is complementary with other augmentation strategies and compatible with various contrastive losses.

cs.LG↗

arXiv2022

Graph Component Contrastive Learning for Concept Relatedness Estimation

Concept relatedness estimation (CRE) aims to determine whether two given concepts are related. Existing methods only consider the pairwise relationship between concepts, while overlooking the higher-order relationship that could be encoded in a concept-level graph structure. We discover that this underlying graph satisfies a set of intrinsic properties of CRE, including reflexivity, commutativity, and transitivity. In this paper, we formalize the CRE properties and introduce a graph structure named ConcreteGraph. To address the data scarcity issue in CRE, we introduce a novel data augmentation approach to sample new concept pairs from the graph. As it is intractable for data augmentation to fully capture the structural information of the ConcreteGraph due to a large amount of potential concept pairs, we further introduce a novel Graph Component Contrastive Learning framework to implicitly learn the complete structure of the ConcreteGraph. Empirical results on three datasets show significant improvement over the state-of-the-art model. Detailed ablation studies demonstrate that our proposed approach can effectively capture the high-order relationship among concepts.

cs.CL↗

arXiv2022

Gradient Imitation Reinforcement Learning for General Low-Resource Information Extraction

Information Extraction (IE) aims to extract structured information from heterogeneous sources. IE from natural language texts include sub-tasks such as Named Entity Recognition (NER), Relation Extraction (RE), and Event Extraction (EE). Most IE systems require comprehensive understandings of sentence structure, implied semantics, and domain knowledge to perform well; thus, IE tasks always need adequate external resources and annotations. However, it takes time and effort to obtain more human annotations. Low-Resource Information Extraction (LRIE) strives to use unsupervised data, reducing the required resources and human annotation. In practice, existing systems either utilize self-training schemes to generate pseudo labels that will cause the gradual drift problem, or leverage consistency regularization methods which inevitably possess confirmation bias. To alleviate confirmation bias due to the lack of feedback loops in existing LRIE learning paradigms, we develop a Gradient Imitation Reinforcement Learning (GIRL) method to encourage pseudo-labeled data to imitate the gradient descent direction on labeled data, which can force pseudo-labeled data to achieve better optimization capabilities similar to labeled data. Based on how well the pseudo-labeled data imitates the instructive gradient descent direction obtained from labeled data, we design a reward to quantify the imitation process and bootstrap the optimization capability of pseudo-labeled data through trial and error. In addition to learning paradigms, GIRL is not limited to specific sub-tasks, and we leverage GIRL to solve all IE sub-tasks (named entity recognition, relation extraction, and event extraction) in low-resource settings (semi-supervised IE and few-shot IE).

cs.CL↗

arXiv2022

Hyperbolic Graph Representation Learning: A Tutorial

Graph-structured data are widespread in real-world applications, such as social networks, recommender systems, knowledge graphs, chemical molecules etc. Despite the success of Euclidean space for graph-related learning tasks, its ability to model complex patterns is essentially constrained by its polynomially growing capacity. Recently, hyperbolic spaces have emerged as a promising alternative for processing graph data with tree-like structure or power-law distribution, owing to the exponential growth property. Different from Euclidean space, which expands polynomially, the hyperbolic space grows exponentially which makes it gains natural advantages in abstracting tree-like or scale-free graphs with hierarchical organizations. In this tutorial, we aim to give an introduction to this emerging field of graph representation learning with the express purpose of being accessible to all audiences. We first give a brief introduction to graph representation learning as well as some preliminary Riemannian and hyperbolic geometry. We then comprehensively revisit the hyperbolic embedding techniques, including hyperbolic shallow models and hyperbolic neural networks. In addition, we introduce the technical details of the current hyperbolic graph neural networks by unifying them into a general framework and summarizing the variants of each component. Moreover, we further introduce a series of related applications in a variety of fields. In the last part, we discuss several advanced topics about hyperbolic geometry for graph representation learning, which potentially serve as guidelines for further flourishing the non-Euclidean graph learning community.

cs.LG↗

arXiv2022

Knowledge-aware Neural Networks with Personalized Feature Referencing for Cold-start Recommendation

Incorporating knowledge graphs (KGs) as side information in recommendation has recently attracted considerable attention. Despite the success in general recommendation scenarios, prior methods may fall short of performance satisfaction for the cold-start problem in which users are associated with very limited interactive information. Since the conventional methods rely on exploring the interaction topology, they may however fail to capture sufficient information in cold-start scenarios. To mitigate the problem, we propose a novel Knowledge-aware Neural Networks with Personalized Feature Referencing Mechanism, namely KPER. Different from most prior methods which simply enrich the targets' semantics from KGs, e.g., product attributes, KPER utilizes the KGs as a "semantic bridge" to extract feature references for cold-start users or items. Specifically, given cold-start targets, KPER first probes semantically relevant but not necessarily structurally close users or items as adaptive seeds for referencing features. Then a Gated Information Aggregation module is introduced to learn the combinatorial latent features for cold-start users and items. Our extensive experiments over four real-world datasets show that, KPER consistently outperforms all competing methods in cold-start scenarios, whilst maintaining superiority in general scenarios without compromising overall performance, e.g., by achieving 0.81%-16.08% and 1.01%-14.49% performance improvement across all datasets in Top-10 recommendation.

cs.IR↗

arXiv2022

Interpretable RNA Foundation Model from Unannotated Data for Highly Accurate RNA Structure and Function Predictions

Non-coding RNA structure and function are essential to understanding various biological processes, such as cell signaling, gene expression, and post-transcriptional regulations. These are all among the core problems in the RNA field. With the rapid growth of sequencing technology, we have accumulated a massive amount of unannotated RNA sequences. On the other hand, expensive experimental observatory results in only limited numbers of annotated data and 3D structures. Hence, it is still challenging to design computational methods for predicting their structures and functions. The lack of annotated data and systematic study causes inferior performance. To resolve the issue, we propose a novel RNA foundation model (RNA-FM) to take advantage of all the 23 million non-coding RNA sequences through self-supervised learning. Within this approach, we discover that the pre-trained RNA-FM could infer sequential and evolutionary information of non-coding RNAs without using any labels. Furthermore, we demonstrate RNA-FM's effectiveness by applying it to the downstream secondary/3D structure prediction, SARS-CoV-2 genome structure and evolution prediction, protein-RNA binding preference modeling, and gene expression regulation modeling. The comprehensive experiments show that the proposed method improves the RNA structural and functional modelling results significantly and consistently. Despite only being trained with unlabelled data, RNA-FM can serve as the foundational model for the field.

q-bio.QM↗

arXiv2022

HICF: Hyperbolic Informative Collaborative Filtering

Considering the prevalence of the power-law distribution in user-item networks, hyperbolic space has attracted considerable attention and achieved impressive performance in the recommender system recently. The advantage of hyperbolic recommendation lies in that its exponentially increasing capacity is well-suited to describe the power-law distributed user-item network whereas the Euclidean equivalent is deficient. Nonetheless, it remains unclear which kinds of items can be effectively recommended by the hyperbolic model and which cannot. To address the above concerns, we take the most basic recommendation technique, collaborative filtering, as a medium, to investigate the behaviors of hyperbolic and Euclidean recommendation models. The results reveal that (1) tail items get more emphasis in hyperbolic space than that in Euclidean space, but there is still ample room for improvement; (2) head items receive modest attention in hyperbolic space, which could be considerably improved; (3) and nonetheless, the hyperbolic models show more competitive performance than Euclidean models. Driven by the above observations, we design a novel learning method, named hyperbolic informative collaborative filtering (HICF), aiming to compensate for the recommendation effectiveness of the head item while at the same time improving the performance of the tail item. The main idea is to adapt the hyperbolic margin ranking learning, making its pull and push procedure geometric-aware, and providing informative guidance for the learning of both head and tail items. Extensive experiments back up the analytic findings and also show the effectiveness of the proposed method. The work is valuable for personalized recommendations since it reveals that the hyperbolic space facilitates modeling the tail item, which often represents user-customized preferences or new products.

cs.IR↗

arXiv2022

COSTA: Covariance-Preserving Feature Augmentation for Graph Contrastive Learning

Graph contrastive learning (GCL) improves graph representation learning, leading to SOTA on various downstream tasks. The graph augmentation step is a vital but scarcely studied step of GCL. In this paper, we show that the node embedding obtained via the graph augmentations is highly biased, somewhat limiting contrastive models from learning discriminative features for downstream tasks. Thus, instead of investigating graph augmentation in the input space, we alternatively propose to perform augmentations on the hidden features (feature augmentation). Inspired by so-called matrix sketching, we propose COSTA, a novel COvariance-preServing feaTure space Augmentation framework for GCL, which generates augmented features by maintaining a "good sketch" of original features. To highlight the superiority of feature augmentation with COSTA, we investigate a single-view setting (in addition to multi-view one) which conserves memory and computations. We show that the feature augmentation with COSTA achieves comparable/better results than graph augmentation based models.

cs.LG↗

arXiv2022

Learning Binarized Graph Representations with Multi-faceted Quantization Reinforcement for Top-K Recommendation

Learning vectorized embeddings is at the core of various recommender systems for user-item matching. To perform efficient online inference, representation quantization, aiming to embed the latent features by a compact sequence of discrete numbers, recently shows the promising potentiality in optimizing both memory and computation overheads. However, existing work merely focuses on numerical quantization whilst ignoring the concomitant information loss issue, which, consequently, leads to conspicuous performance degradation. In this paper, we propose a novel quantization framework to learn Binarized Graph Representations for Top-K Recommendation (BiGeaR). BiGeaR introduces multi-faceted quantization reinforcement at the pre-, mid-, and post-stage of binarized representation learning, which substantially retains the representation informativeness against embedding binarization. In addition to saving the memory footprint, BiGeaR further develops solid online inference acceleration with bitwise operations, providing alternative flexibility for the realistic deployment. The empirical results over five large real-world benchmarks show that BiGeaR achieves about 22%~40% performance improvement over the state-of-the-art quantization-based recommender system, and recovers about 95%~102% of the performance capability of the best full-precision counterpart with over 8x time and space reduction.

cs.IR↗

arXiv2022

Retrieval-Augmented Multilingual Keyphrase Generation with Retriever-Generator Iterative Training

Keyphrase generation is the task of automatically predicting keyphrases given a piece of long text. Despite its recent flourishing, keyphrase generation on non-English languages haven't been vastly investigated. In this paper, we call attention to a new setting named multilingual keyphrase generation and we contribute two new datasets, EcommerceMKP and AcademicMKP, covering six languages. Technically, we propose a retrieval-augmented method for multilingual keyphrase generation to mitigate the data shortage problem in non-English languages. The retrieval-augmented model leverages keyphrase annotations in English datasets to facilitate generating keyphrases in low-resource languages. Given a non-English passage, a cross-lingual dense passage retrieval module finds relevant English passages. Then the associated English keyphrases serve as external knowledge for keyphrase generation in the current language. Moreover, we develop a retriever-generator iterative training algorithm to mine pseudo parallel passage pairs to strengthen the cross-lingual passage retriever. Comprehensive experiments and ablations show that the proposed approach outperforms all baselines.

cs.CL↗

arXiv2022

HRCF: Enhancing Collaborative Filtering via Hyperbolic Geometric Regularization

In large-scale recommender systems, the user-item networks are generally scale-free or expand exponentially. The latent features (also known as embeddings) used to describe the user and item are determined by how well the embedding space fits the data distribution. Hyperbolic space offers a spacious room to learn embeddings with its negative curvature and metric properties, which can well fit data with tree-like structures. Recently, several hyperbolic approaches have been proposed to learn high-quality representations for the users and items. However, most of them concentrate on developing the hyperbolic similitude by designing appropriate projection operations, whereas many advantageous and exciting geometric properties of hyperbolic space have not been explicitly explored. For example, one of the most notable properties of hyperbolic space is that its capacity space increases exponentially with the radius, which indicates the area far away from the hyperbolic origin is much more embeddable. Regarding the geometric properties of hyperbolic space, we bring up a Hyperbolic Regularization powered Collaborative Filtering(HRCF) and design a geometric-aware hyperbolic regularizer. Specifically, the proposal boosts optimization procedure via the root alignment and origin-aware penalty, which is simple yet impressively effective. Through theoretical analysis, we further show that our proposal is able to tackle the over-smoothing problem caused by hyperbolic aggregation and also brings the models a better discriminative ability. We conduct extensive empirical analysis, comparing our proposal against a large set of baselines on several public benchmarks. The empirical results show that our approach achieves highly competitive performance and surpasses both the leading Euclidean and hyperbolic baselines by considerable margins.

cs.IR↗

arXiv2022

Multimodality in Meta-Learning: A Comprehensive Survey

Meta-learning has gained wide popularity as a training framework that is more data-efficient than traditional machine learning methods. However, its generalization ability in complex task distributions, such as multimodal tasks, has not been thoroughly studied. Recently, some studies on multimodality-based meta-learning have emerged. This survey provides a comprehensive overview of the multimodality-based meta-learning landscape in terms of the methodologies and applications. We first formalize the definition of meta-learning in multimodality, along with the research challenges in this growing field, such as how to enrich the input in few-shot learning (FSL) or zero-shot learning (ZSL) in multimodal scenarios and how to generalize the models to new tasks. We then propose a new taxonomy to discuss typical meta-learning algorithms in multimodal tasks systematically. We investigate the contributions of related papers and summarize them by our taxonomy. Finally, we propose potential research directions for this promising field.

cs.LG↗