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J. A. Noble

Publications and source records attributed to J. A. Noble.

At least 19 recordsLinked to original sources

Ice chemistry that can be unveiled with the JWST: SynthIceSpec, a synthetic spectrum generator to test spectral limits. Solid CO_2 as a dust thermometer and solid CH_3CN detectability in cold cores

As the (JWST) pursues its observing journey, several thousands of icy-grain spectra are expected to be measured and analysed. The inventory of ices in particular, via the observations of background sources, is accessible for hundreds of lines of sight (LOSs) per molecular-cloud region, opening the possibility to add strong constraints on the solid phase chemistry in a vast domain of cloud densities. SynthIceSpec is a synthetic infrared (IR) spectrum generator that has been designed as a tool to support observing proposals and to test the outcome of chemical models. It is based on laboratory measurements of pure and mixed ices, where each vibrational component is fitted by a sum of Gaussian profiles. Given an initial ice chemical composition (either set by the user or the outputs of a chemical model), a full JWST spectrum is generated, to which the contribution of silicates; continuum, stellar photospheric absorption bands; and extinction law can be added. For the continuum, stellar photospheric models for a wide range of spectral types can be selected by the program, or, Spectral Energy Distribution (SEDs). We present a few use cases of SynthIceSpec: we probed the impact of dust temperature on CO_2 ice formation using IR data and gas-grain modelling. Next, we used SynthIceSpec to explore the detectability of the main feature of CH_3CN at 4.45 um in a cold core environment with the JWST, which was previously tentatively detected in YSOs. The detection thresholds we derive are reasonably low and observable, but identification is directly impacted by the photosphere absorptions that can greatly hinder identification. For some photostellar types, it could remain feasible. Coupled with the Estimated Time Calculator of the Space Telescope Science Institute, SynthIceSpec can be used to find the optimum observational setup for new observations.

astro-ph.GA

Chemical constraints on the dynamical evolution of the cold core L694

In star-forming regions, molecular cloud history and dynamics set the trend in the chemical composition. Ice formation, in particular, is affected by the evolution of physical conditions, which can lead to different ice compositions within the same cloud. In cold cores with medium densities >1e4 cm-3, low temperatures <15 K, and low UV radiation <G0, most COMs are formed on dust grain surfaces and are released back into the gas phase through non-thermal mechanisms. Studying both gas- and solid-phases can help observers to add constraints on the chemical and dynamical evolution of cold cores. We present a study of the cold core L694, observed with the IRAM 30m telescope. Observed species include CO (and its isotopologues) and CH3OH. We applied an inverted non-LTE radiative transfer code in order to obtain gas-phase abundances by deriving the column densities of the detected species from the spectroscopic parameters of the targeted molecular transitions, and from physical parameters derived from archival observations. This allowed us to probe the molecular abundances as a function of density and visual extinction. In parallel, we ran chemical models (both static and dynamic) to constrain the evolution time of the core by directly comparing the observations with the model outputs. We then compared the compositions of the cold cores L429-C and L694. The gas-phase abundances in L694 all exhibit a common depletion profile (with high variability in the depletion factor), as the core is identified to be in a more advanced (infalling) state compared to L429-C. The physical parameters of the two cores are, however, very similar, leading to close evolutionary timescales in our static models. The dynamical model fails to reproduce the CO gas-phase abundances at high density, predicting an evolutionary timescale that is too short compared to static models.

astro-ph.GA

The edge-on disk Tau042021: icy grains at high altitudes and a wind containing astronomical PAHs

Spectra of the nearly edge-on protoplanetary disks observed with the JWST have shown ice absorption bands of varying optical depths and peculiar profiles, challenging radiative transfer modelling and our understanding of dust and ice in disks. We build models including dust grain size, shape, and composition to reproduce JWST IFU spectroscopy of the large edge-on disk Tau042021. We explore radiative transfer models using different dust grain size distributions, including grains of effective radii a_eff = 0.005-3000 microns. Scattering properties of distributions of triaxial ellipsoidal grains are calculated. We consider compositions with silicates, amorphous carbon, and mixtures of H2O, CO2, and CO. We use RADMC-3D Monte Carlo radiative transfer models of Tau042021 to simulate the spectral cubes observed with JWST-NIRSpec and MIRI. We compare the results to observations, including H2O at 3.05 microns, CO at 4.67 microns, and CO2 at 4.27 microns and to archival JWST-NIRCam and ALMA continuum images. The observed near- to mid-infrared imply dust distributions with grain sizes up to several tens of microns. The intensity distribution perpendicular to the disk exhibits emission profile wings extending into the upper disk atmosphere at altitudes exceeding the classical scale height expected in the isothermal hydrostatic limit. We produce ice map images demonstrating the presence of icy dust grains up to altitudes high above the disk midplane, more than three hydrostatic equilibrium scale heights. We demonstrate the presence of a wind containing the carriers of astronomical PAH bands. The wind appears as an X-shaped emission at 3.3, 6.2, 7.7 and 11.3 microns, characteristic wavelengths of the infrared astronomical PAH bands. We associate the spatial distribution of this component with carriers of astronomical PAH bands that form a layer of emission at the interface with the H2 wind.

astro-ph.EP

Predicting the detectability of sulphur-bearing molecules in the solid phase with simulated spectra of JWST instruments

To date, gas phase observations of sulphur in dense interstellar environments have only constrained the molecular carriers of 1% of its predicted cosmic abundance. An additional 5% is known to be locked up in molecular solids in dense clouds, leaving the main reservoir of depleted sulphur in the solid phase unknown. The spectral resolution and sensitivity of the JWST could make a substantial difference in detecting part of this missing sulphur, with its wavelength coverage that includes vibrational absorption features of the S-carriers H2S, OCS, SO2, CS2, SO, CS, and S8. The aim of this study is to determine whether these molecules may be viable candidates for detection. We carried out new laboratory measurements of the IR absorption spectra of CS2 and S8 to update the IR band strength of the most intense CS2 absorption feature at 6.8 μm, as well as to determine that of S8 at 20.3 μm for the first time. These data, along with values previously reported in the literature, allow us to evaluate which S-bearing species could be potentially detected with JWST in interstellar ices. Taking the literature abundances of the major ice species determined by previous IR observations towards starless cores, LYSOs and MYSOs, we generated simulated IR spectra using the characteristics of the instruments on the JWST. Thus, we have been able to establish a case study for three stages of the star formation process. We conclude that the detection of S-bearing molecules remains challenging. Despite these obstacles, the detection of H2S and potentially SO2 should be possible in regions with favourable physical and chemical conditions. In contrast, S8 would remain undetected. Although the sensitivity of JWST is insufficient to determine the sulphur budget in the solid state, the detection of an additional icy sulphur compound (H2S, SO2) would enable us to elevate our knowledge of sulphur chemistry.

astro-ph.GA

Ice inventory towards the protostar Ced 110 IRS4 observed with the James Webb Space Telescope. Results from the ERS Ice Age program

This work focuses on the ice features toward the binary protostellar system Ced 110 IRS 4A and 4B, and observed with JWST as part of the Early Release Science Ice Age collaboration. We aim to explore the JWST observations of the binary protostellar system Ced~110~IRS4A and IRS4B to unveil and quantify the ice inventories toward these sources. We compare the ice abundances with those found for the same molecular cloud. The analysis is performed by fitting or comparing laboratory infrared spectra of ices to the observations. Spectral fits are carried out with the ENIIGMA fitting tool that searches for the best fit. For Ced~110~IRS4B, we detected the major ice species H$_2$O, CO, CO$_2$ and NH$_3$. All species are found in a mixture except for CO and CO$_2$, which have both mixed and pure ice components. In the case of Ced~110~IRS4A, we detected the same major species as in Ced~110~IRS4B, as well as the following minor species CH$_4$, SO$_2$, CH$_3$OH, OCN$^-$, NH$_4^+$ and HCOOH. Tentative detection of N$_2$O ice (7.75~$μ$m), forsterite dust (11.2~$μ$m) and CH$_3^+$ gas emission (7.18~$μ$m) in the primary source are also presented. Compared with the two lines of sight toward background stars in the Chameleon I molecular cloud, the protostar has similar ice abundances, except in the case of the ions that are higher in IRS4A. The clearest differences are the absence of the 7.2 and 7.4~$μ$m absorption features due to HCOO$^-$ and icy complex organic molecules in IRS4A and evidence of thermal processing in both IRS4A and IRS4B as probed by the CO$_2$ ice features. We conclude that the binary protostellar system Ced~110~IRS4A and IRS4B has a large inventory of icy species. The similar ice abundances in comparison to the starless regions in the same molecular cloud suggest that the chemical conditions of the protostar were set at earlier stages in the molecular cloud.

astro-ph.SR

A JWST/MIRI analysis of the ice distribution and PAH emission in the protoplanetary disk HH 48 NE

Ice-coated dust grains provide the main reservoir of volatiles that play an important role in planet formation processes and may become incorporated into planetary atmospheres. However, due to observational challenges, the ice abundance distribution in protoplanetary disks is not well constrained. We present JWST/MIRI observations of the edge-on disk HH 48 NE carried out as part of the IRS program Ice Age. We detect CO$_2$, NH$_3$, H$_2$O and tentatively CH$_4$ and NH$_4^+$. Radiative transfer models suggest that ice absorption features are produced predominantly in the 50-100 au region of the disk. The CO$_2$ feature at 15 micron probes a region closer to the midplane (z/r = 0.1-0.15) than the corresponding feature at 4.3 micron (z/r = 0.2-0.6), but all observations trace regions significantly above the midplane reservoirs where we expect the bulk of the ice mass to be located. Ices must reach a high scale height (z/r ~ 0.6; corresponding to modeled dust extinction Av ~ 0.1), in order to be consistent with the observed vertical distribution of the peak ice optical depths. The weakness of the CO$_2$ feature at 15 micron relative to the 4.3 micron feature and the red emission wing of the 4.3 micron CO$_2$ feature are both consistent with ices being located at high elevation in the disk. The retrieved NH$_3$ abundance and the upper limit on the CH$_3$OH abundance relative to H$_2$O are significantly lower than those in the interstellar medium (ISM), but consistent with cometary observations. Full wavelength coverage is required to properly study the abundance distribution of ices in disks. To explain the presence of ices at high disk altitudes, we propose two possible scenarios: a disk wind that entrains sufficient amounts of dust, thus blocking part of the stellar UV radiation, or vertical mixing that cycles enough ices into the upper disk layers to balance ice photodesorption.

astro-ph.EP

JWST MIRI MRS Images Disk Winds, Water, and CO in an Edge-On Protoplanetary Disk

We present JWST MIRI MRS observations of the edge-on protoplanetary disk around the young sub-solar mass star Tau 042021, acquired as part of the Cycle 1 GO program "Mapping Inclined Disk Astrochemical Signatures (MIDAS)." These data resolve the mid-IR spatial distributions of H$_2$, revealing X-shaped emission extending to ~200 au above the disk midplane with a semi-opening angle of $35 \pm 5$ degrees. We do not velocity-resolve the gas in the spectral images, but the measured semi-opening angle of the H$_2$ is consistent with an MHD wind origin. A collimated, bipolar jet is seen in forbidden emission lines from [Ne II], [Ne III], [Ni II], [Fe II], [Ar II], and [S III]. Extended H$_2$O and CO emission lines are also detected, reaching diameters between ~90 and 190 au, respectively. Hot molecular emission is not expected at such radii, and we interpret its extended spatial distribution as scattering of inner disk molecular emission by dust grains in the outer disk surface. H I recombination lines, characteristic of inner disk accretion shocks, are similarly extended, and are likely also scattered light from the innermost star-disk interface. Finally, we detect extended PAH emission at 11.3 microns co-spatial with the scattered light continuum, making this the first low-mass T Tauri star around which extended PAHs have been confirmed, to our knowledge. MIRI MRS line images of edge-on disks provide an unprecedented window into the outflow, accretion, and scattering processes within protoplanetary disks, allowing us to constrain the disk lifetimes and accretion and mass loss mechanisms.

astro-ph.SR

A JWST inventory of protoplanetary disk ices: The edge-on protoplanetary disk HH 48 NE, seen with the Ice Age ERS program

Ices are the main carriers of volatiles in protoplanetary disks and are crucial to our understanding of the chemistry that ultimately sets the organic composition of planets. The ERS program Ice Age on the JWST follows the ice evolution through all stages of star and planet formation. JWST/NIRSpec observations of the edge-on Class II protoplanetary disk HH~48~NE reveal spatially resolved absorption features of the major ice components H$_2$O, CO$_2$, CO, and multiple weaker signatures from less abundant ices NH$_3$, OCN$^-$, and OCS. Isotopologue $^{13}$CO$_2$ ice has been detected for the first time in a protoplanetary disk. Since multiple complex light paths contribute to the observed flux, the ice absorption features are filled in by ice-free scattered light. The $^{12}$CO$_2$/$^{13}$CO$_2$ ratio of 14 implies that the $^{12}$CO$_2$ feature is saturated, without the flux approaching 0, indicative of a very high CO$_2$ column density on the line of sight, and a corresponding abundance with respect to hydrogen that is higher than ISM values by a factor of at least a few. Observations of rare isotopologues are crucial, as we show that the $^{13}$CO$_2$ observation allows us to determine the column density of CO$_2$ to be at an order of magnitude higher than the lower limit directly inferred from the observed optical depth. Radial variations in ice abundance, e.g., snowlines, are significantly modified since all observed photons have passed through the full radial extent of the disk. CO ice is observed at perplexing heights in the disk, extending to the top of the CO-emitting gas layer. We argue that the most likely interpretation is that we observe some CO ice at high temperatures, trapped in less volatile ices like H$_2$O and CO$_2$. Future radiative transfer models will be required to constrain the implications on our current understanding of disk physics and chemistry.

astro-ph.EP

Astrochemical models of interstellar ices: History matters

Ice is ubiquitous in the interstellar medium. We model the formation of the main constituents of interstellar ices, including H2O, CO2 , CO, and CH3 OH. We strive to understand what physical or chemical parameters influence the final composition of the ice and how they benchmark to what has already been observed, with the aim of applying these models to the preparation and analysis of JWST observations. We used the Nautilus gas-grain model, which computes the gas and ice composition as a function of time for a set of physical conditions, starting from an initial gas phase composition. All important processes (gas-phase reactions, gas-grain interactions, and grain surface processes) are included and solved with the rate equation approximation. We first ran an astrochemical code for fixed conditions of temperature and density mapped in the cold core L429-C to benchmark the chemistry. One key parameter was revealed to be the dust temperature. When the dust temperature is higher than 12 K, CO2 will form efficiently at the expense of H2O, while at temperatures below 12 K, it will not form. Whatever hypothesis we assumed for the chemistry (within realistic conditions), the static simulations failed to reproduce the observed trends of interstellar ices in our target core. In a second step, we simulated the chemical evolution of parcels of gas undergoing different physical and chemical situations throughout the molecular cloud evolution and starting a few 1e7 yr prior to the core formation (dynamical simulations). Our dynamical simulations satisfactorily reproduce the main trends already observed for interstellar ices. Moreover, we predict that the apparent constant ratio of CO2/H2O observed to date is probably not true for regions of low AV , and that the history of the evolution of clouds plays an essential role, even prior to their formation.

astro-ph.GA

An Ice Age JWST inventory of dense molecular cloud ices

Icy grain mantles are the main reservoir of the volatile elements that link chemical processes in dark, interstellar clouds with the formation of planets and composition of their atmospheres. The initial ice composition is set in the cold, dense parts of molecular clouds, prior to the onset of star formation. With the exquisite sensitivity of JWST, this critical stage of ice evolution is now accessible for detailed study. Here we show the first results of the Early Release Science program "Ice Age" that reveal the rich composition of these dense cloud ices. Weak ices, including, $^{13}$CO$_2$, OCN$^-$, $^{13}$CO, OCS, and COMs functional groups are now detected along two pre-stellar lines of sight. The $^{12}$CO$_2$ ice profile indicates modest growth of the icy grains. Column densities of the major and minor ice species indicate that ices contribute between 2 and 19% of the bulk budgets of the key C, O, N, and S elements. Our results suggest that the formation of simple and complex molecules could begin early in a water-ice rich environment.

astro-ph.GA

Constraints on the non-thermal desorption of methanol in the cold core LDN 429-C

Cold cores are an early step of star formation, characterized by densities > 10$^4$ cm$^{-3}$, low temperatures (< 15 K), and very low external UV radiation. We investigate the physico-chemical processes at play to tracing the origin of molecules that are predominantly formed via reactions on dust grain surfaces. We observed the cold core LDN 429-C with the NOEMA interferometer and the IRAM 30m single dish telescope in order to obtain the gas-phase abundances of key species, including CO and CH$_3$OH. Comparing the observed gas phase of methanol to its solid phase previously observed with Spitzer allows us to put quantitative constraints on the efficiency of the non-thermal desorption of this species. With physical parameters determined from available Herschel data, we computed abundance maps of 11 detected molecules with a non-local thermal equilibrium radiative transfer model. These observations allowed us to probe the molecular abundances as a function of density and visual extinction, with the variation in temperature being restrained between 12 and 18 K. We then compared the observed abundances to the predictions of the Nautilus astrochemical model. We find that all molecules have lower abundances at high densities and visual extinctions with respect to lower density regions, except for methanol. Comparing these observations with a grid of chemical models based on the local physical conditions, we were able to reproduce these observations, allowing only the parameter time to vary. Comparing the observed gas-phase abundance of methanol with previous measurements of the methanol ice, we estimate a non-thermal desorption efficiency between 0.002% and 0.09%, increasing with density. The apparent increase in the desorption efficiency cannot be reproduced by our model unless the yield of cosmic-ray sputtering is altered due to the ice composition varying as a function of density.

astro-ph.GA

IRFEL Selective Irradiation of Amorphous Solid Water: from Dangling to Bulk Modes

Amorphous solid water (ASW) is one of the most widely studied solid phase systems. A better understanding of the nature of inter- and intramolecular forces in ASW is, however, still required to correctly interpret the catalytic role of ASW in the formation and preservation of molecular species in environments such as the icy surfaces of Solar System objects, on interstellar icy dust grains and potentially even in the upper layers of the Earth's atmosphere. In this work, we have systematically exposed porous ASW (pASW) to mid-infrared radiation generated by a free-electron laser at the HFML-FELIX facility in the Netherlands to study the effect of vibrational energy injection into the surface and bulk modes of pASW. During multiple sequential irradiations on the same ice spot, we observed selective effects both at the surface and in the bulk of the ice. Although the density of states in pASW should allow for a fast vibrational relaxation through the H-bonded network, part of the injected energy is converted into structural ice changes as illustrated by the observation of spectral modifications when performing Fourier transform infrared spectroscopy in reflection-absorption mode. Future studies will include the quantification of such effects by systematically investigating ice thickness, ice morphology, and ice composition.

physics.chem-ph

Influence of the ice structure on the soft UV photochemistry of PAHs embedded in solid water

The UV photoreactivity of polycyclic aromatic hydrocarbons (PAHs) in porous amorphous solid water has long been known to form both oxygenated photoproducts and photofragments. The aim of this study was to examine the influence of the ice structure upon reactivity under soft UV irradiation conditions. Mixtures of PAHs with amorphous solid water (porous and compact) and crystalline (cubic and hexagonal) ices were prepared in a high vacuum chamber and irradiated using a mercury lamp for up to 2.5 hours. The results show that the production of oxygenated PAHs is efficient only in amorphous water ice, while fragmentation can occur in both amorphous and crystalline ices. We conclude that the reactivity is driven by PAH-water interactions in favourable geometries, notably where dangling bonds are available at the surface of pores. These results suggest that the formation of oxygenated PAH molecules is most likely to occur in interstellar environments with porous (or compact) amorphous solid water and that this reactivity could considerably influence the inventory of aromatics in meteorites.

astro-ph.EP

Infrared resonant vibrationally induced restructuring of amorphous solid water

Amorphous solid water (ASW) is abundantly present in the interstellar medium, where it forms a mantle on interstellar dust particles and it is the precursor for cometary ices. In space, ASW acts as substrate for interstellar surface chemistry leading to complex molecules and it is postulated to play a critical role in proton-transfer reactions. Although ASW is widely studied and is generally well characterized by different techniques, energetically-induced structural changes, such as ion, electron and photon irradiation, in these materials are less well understood. Selective pumping of specific infrared (IR) vibrational modes can aid in understanding the role of vibrations in restructuring of hydrogen bonding networks. Here we present the first experimental results on hydrogen bonding changes in ASW induced by the intense, nearly monochromatic mid-IR free-electron laser (FEL) radiation of the FELIX-2 beamline at the FELIX Laboratory at the Radboud University in Nijmegen, the Netherlands. The changes are monitored by reflection-absorption infrared spectroscopy. Upon resonant irradiation, a modification in IR absorption band profile of ASW is observed in agreement with a growing crystalline-like contribution and a decreasing amorphous contribution. This phenomenon saturates within a few minutes of FEL irradiation, modifying upwards of 94~\% of the irradiated ice. The effect is further analysed in terms of hydrogen bonding donors and acceptors and the experiments are complimented with Molecular Dynamics simulations to constrain the effect at the molecular level.

cond-mat.mtrl-sci

Sequential anatomy localization in fetal echocardiography videos

Fetal heart motion is an important diagnostic indicator for structural detection and functional assessment of congenital heart disease. We propose an approach towards integrating deep convolutional and recurrent architectures that utilize localized spatial and temporal features of different anatomical substructures within a global spatiotemporal context for interpretation of fetal echocardiography videos. We formulate our task as a cardiac structure localization problem with convolutional architectures for aggregating global spatial context and detecting anatomical structures on spatial region proposals. This information is aggregated temporally by recurrent architectures to quantify the progressive motion patterns. We experimentally show that the resulting architecture combines anatomical landmark detection at the frame-level over multiple video sequences-with temporal progress of the associated anatomical motions to encode local spatiotemporal fetal heart dynamics and is validated on a real-world clinical dataset.

cs.CV

Two dimensional ice mapping of molecular cores

We present maps of the column densities of H$_2$O, CO$_2$, and CO ices towards the molecular cores B~35A, DC~274.2-00.4, BHR~59, and DC~300.7-01.0. These ice maps, probing spatial distances in molecular cores as low as 2200~AU, challenge the traditional hypothesis that the denser the region observed, the more ice is present, providing evidence that the relationships between solid molecular species are more varied than the generic picture we often adopt to model gas-grain chemical processes and explain feedback between solid phase processes and gas phase abundances. We present the first combined solid-gas maps of a single molecular species, based upon observations of both CO ice and gas phase C$^{18}$O towards B~35A, a star-forming dense core in Orion. We conclude that molecular species in the solid phase are powerful tracers of "small scale" chemical diversity, prior to the onset of star formation. With a component analysis approach, we can probe the solid phase chemistry of a region at a level of detail greater than that provided by statistical analyses or generic conclusions drawn from single pointing line-of-sight observations alone.

astro-ph.GA

Efficient photochemistry of coronene: water complexes

The photochemistry of ices with polycyclic aromatic hydrocarbons (PAHs) has been extensively studied, but to date no investigation has been made of PAHs in interaction with low numbers (n < 4) of molecules of water. We performed photochemical matrix isolation studies of coronene:water complexes, probing the argon matrix with FTIR spectroscopy. We find that coronene readily reacts with water upon irradiation with a mercury vapour lamp to produce oxygenated PAH photoproducts, and we postulate a reaction mechanism via a charge transfer Rydberg state. This result suggests that oxygenated PAHs should be widely observed in regions of the ISM with sufficiently high water abundances, for example near the edges of molecular clouds where water molecules begin to form, but before icy layers are observed, that is at AV <3. In order to explain the low derived observational abundances of oxygenated PAHs, additional destruction routes must be invoked.

astro-ph.GA

The electronic spectra of protonated PANH molecules

Aims. This study was designed to examine the viability of protonated nitrogen-substituted polycyclic aromatic hydrocarbons (H+PANHs) as candidates for the carriers of the diffuse interstellar bands (DIBs). Methods. We obtained the electronic spectra of two protonated PANH cations, protonated acridine and phenanthridine, using parent ion photo-fragment spectroscopy and generated theoretical electronic spectra using ab initio calculations. Results. We show that the spectra of the two species studied here do not correspond to known DIBs. However, based on the general properties derived from the spectra of these small protonated nitrogen-substituted PAHs, we propose that larger H+PANH cations represent good candidates for DIB carriers due to the expected positions of their electronic transitions in the UV-visible and their narrow spectral bands.

astro-ph.SR