arXiv subjects

J. Martínez-Sykora

Publications and source records attributed to J. Martínez-Sykora.

14 recordsLinked to original sources

arXiv2026

The gravitational stratification of multifluid and multispecies plasma

Context. The solar atmosphere is gravitationally stratified and consists of several layers at temperatures that vary by several orders of magnitude. Consequently, the solar atmospheric plasma changes from weakly ionized in the photosphere, partially ionized in the chromosphere, and to fully ionized in the corona. However, integrating ionization and recombination processes into multifluid solar plasma models with gravitational stratification continues to be a nontrivial task. Aims. We intend to provide a method for constructing multifluid+multispecies (MFMS) gravitational stratification that satisfies the ionization equilibrium and hydrostatic equilibrium at the same time, avoiding causing nonphysical disturbances and numerical instability due to the initial imbalances. Methods. We assume that collisional interactions between fluids are sufficient for coupling all fluids when there is no high-frequency external driving force imposed. Ionization fractions can be (I) calculated assuming ionization in statistical equilibrium at any given temperature or (II) extracted from other atmospheric models. A simple numerical integration routine would then be used to construct MFMS gravitational stratifications. Results. The gravitational stratification in hydrostatic equilibrium can be constructed using the present numerical integration routine with any given ionization fractions of multispecies plasmas. Meanwhile, without any dynamic driving force, fluid decoupling is initiated, particularly in the transition region of the constructed stratification, while the total velocity of all fluids remains at the level of zero. Conclusions. A gravitational stratification constructed using the present routine can be used in MFMS models to study specific dynamics without being affected by the initial imbalances.

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arXiv2026

Extreme-ultraviolet synthesis of nanojet-like ejections due to coalescing flux ropes

Detection and characterization of small-scale energetic events such as nanoflares and nanojets remain challenging owing to their short lifetimes, small spatial extent, and relatively low energy release, despite their potential role in coronal heating. Recent observations have identified nanojets as small-scale (length $\lesssim 6.6$~Mm, width $\lesssim 1$~Mm), fast ($\sim$~few 100 km s$^{-1}$), and short-lived ($\lesssim 30$~s) ejections associated with nanoflare-scale energies, providing evidence of magnetic reconnection at small spatial scales. However, the lack of synthetic diagnostics has limited the connection between magnetohydrodynamic (MHD) models and observations. In this Letter, we present synthetic observations of the coalescence of two flux ropes, leading to nanojet-like signatures from a numerical model obtained with the \texttt{MPI-AMRVAC} code. We report synthetic observables in Extreme-ultraviolet lines compatible with existing instruments such as SDO/AIA, and upcoming MUSE mission, and compare the synthetic observables with an existing observation of nanojets. The synthetic diagnostics of the emissivity maps, Doppler velocity, thermal, and non-thermal line broadening produce key observational properties, suggesting a plausible 3D scenario for nanojet generation where tiny flux ropes reconnect within loops. Our results provide predictions for the detectability of nanojets with current and future spectroscopic facilities, and establish a bridge between MHD modeling and observations.

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arXiv2024

Time-Adaptive PIROCK Method with Error Control for Multi-Fluid and Single-Fluid MHD Systems

The solar atmosphere is a complex environment with diverse species and varying ionization states, especially in the chromosphere, where significant ionization variations occur. This region transitions from highly collisional to weakly collisional states, leading to complex plasma state transitions influenced by magnetic strengths and collisional properties. These processes introduce numerical stiffness in multi-fluid models, imposing severe timestep restrictions on standard time integration methods. New numerical methods are essential to address these computational challenges, effectively managing the diverse timescales in multi-fluid and multi-physics models. The widely used time operator splitting technique offers a straightforward approach but requires careful timestep management to avoid stability issues and errors. Despite some studies on splitting errors, their impact on solar and stellar astrophysics is often overlooked. We focus on a Multi-Fluid Multi-Species (MFMS) model, which presents significant challenges for time integration. We propose a second-order Partitioned Implicit-Explicit Runge-Kutta (PIROCK) method that combines efficient explicit and implicit integration techniques with variable time-stepping and error control. Compared to a standard third-order explicit method and a first-order Lie splitting approach, the PIROCK method shows robust advantages in accuracy, stability, and computational efficiency. Our results reveal PIROCK's capability to solve multi-fluid problems with unprecedented efficiency. Preliminary results on chemical fractionation represent a significant step toward understanding the First-Ionization-Potential (FIP) effect in the solar atmosphere.

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arXiv2024

Extreme-ultraviolet (EUV) observables of simulated plasmoid-mediated reconnection in the solar corona

Understanding the role of magnetic reconnection in the heating and dynamics of the solar atmosphere requires detailed observational data of any observable aspect of the reconnection process, including small-scale features such as plasmoids. Here, we examine the capability of active and upcoming instruments to detect plasmoids generated by reconnection in the corona including low-density regimes. We used the Bifrost code to perform simulations of plasmoid-mediated reconnection in the corona with a 2D idealized setup: a fan-spine topology with uniform density including thermal conduction. Through a forward-modeling of extreme-ultraviolet (EUV) observables, we checked whether our simulated plasmoids could be detected with the instruments of Solar Dynamics Observatory (SDO) and Solar Orbiter (SO), as well as the upcoming Multi-Slit Solar Explorer (MUSE) and Solar-C missions. Short-lived (10-20 s) small-scale (0.2-0.5 Mm) coronal plasmoids are not resolvable with the Atmospheric Imaging Assembly (AIA) on board SDO, but could be captured with the Extreme Ultraviolet Imager (EUI) of SO. The spatial and temporal high-resolution planned for the MUSE spectrograph (SG) is adequate to obtain full spectral information of these plasmoids. Detection of 0.8 MK plasmoids in the MUSE/SG 171 Å channel is possible in full-raster mode in regions with electron densities above 10^9 cm^3 whereas on sit-and-stare mode for lower-density regions. Solar-C could also capture these coronal plasmoids using the EUV High-Throughput Spectroscopic Telescope (EUVST), considering rapid changes in Doppler shift and line widths in different EUV lines caused by plasmoid motions along the current sheet. With combined spectra of MUSE/SG and Solar-C/EUVST in multiple emission lines, along with high-resolution images from SO/EUI and MUSE/CI, it should be possible to gain new insights about plasmoid formation in the corona.

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arXiv2020

Ambipolar diffusion in the Bifrost code

Ambipolar diffusion is a physical mechanism related to the drift between charged and neutral particles in a partially ionized plasma that is key in many different astrophysical systems. However, understanding its effects is challenging due to basic uncertainties concerning relevant microphysical aspects and the strong constraints it imposes on the numerical modeling. Our aim is to introduce a numerical tool that allows us to address complex problems involving ambipolar diffusion in which, additionally, departures from ionization equilibrium are important or high resolution is needed. The primary application of this tool is for solar atmosphere calculations, but the methods and results presented here may also have a potential impact on other astrophysical systems. We have developed a new module for the stellar atmosphere Bifrost code that improves its computational capabilities of the ambipolar diffusion term in the Generalized Ohm's Law. This module includes, among other things, collision terms adequate to processes in the coolest regions in the solar chromosphere. As a key feature of the module, we have implemented the Super Time-Stepping (STS) technique, that allows an important acceleration of the calculations. We have also introduced hyperdiffusion terms to guarantee the stability of the code. We show that to have an accurate value for the ambipolar diffusion coefficient in the solar atmosphere it is necessary to include as atomic elements in the equation of state not only hydrogen and helium but also the main electron donors like sodium, silicon and potassium. In addition, we establish a range of criteria to set up an automatic selection of the free parameters of the STS method that guarantees the best performance, optimizing the stability and speed for the ambipolar diffusion calculations. We validate the STS implementation by comparison with a self-similar analytical solution.

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arXiv2019

Nonequilibrium ionization and ambipolar diffusion in solar magnetic flux emergence processes

Magnetic flux emergence has been shown to be a key mechanism for unleashing a wide variety of solar phenomena. However, there are still open questions concerning the rise of the magnetized plasma through the atmosphere, mainly in the chromosphere, where the plasma departs from local thermodynamic equilibrium (LTE) and is partially ionized. We aim to investigate the impact of the nonequilibrium (NEQ) ionization and recombination and molecule formation of hydrogen, as well as ambipolar diffusion, on the dynamics and thermodynamics of the flux emergence process. Using the Bifrost code, we performed 2.5D numerical experiments of magnetic flux emergence from the convection zone up to the corona. The experiments include the NEQ ionization and recombination of atomic hydrogen, the NEQ formation and dissociation of H2 molecules, and the ambipolar diffusion term of the Generalized Ohm's Law. Our experiments show that the LTE assumption substantially underestimates the ionization fraction in most of the emerged region, leading to an artificial increase in the ambipolar diffusion and, therefore, in the heating and temperatures as compared to those found when taking the NEQ effects on the hydrogen ion population into account. We see that LTE also overestimates the number density of H2 molecules within the emerged region, thus mistakenly magnifying the exothermic contribution of the H2 molecule formation to the thermal energy during the flux emergence process. We find that the ambipolar diffusion does not significantly affect the amount of total unsigned emerged magnetic flux, but it is important in the shocks that cross the emerged region, heating the plasma on characteristic times ranging from 0.1 to 100 s. We also briefly discuss the importance of including elements heavier than hydrogen in the equation of state so as not to overestimate the role of ambipolar diffusion in the atmosphere.

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arXiv2018

On the importance of the nonequilibrium ionization of Si IV and O IV and the line-of-sight in solar surges

Surges are ubiquitous cool ejections in the solar atmosphere that often appear associated with transient phenomena like UV bursts or coronal jets. Recent observations from the Interface Region Imaging Spectrograph (IRIS) show that surges, although traditionally related to chromospheric lines, can exhibit enhanced emission in Si IV with brighter spectral profiles than for the average transition region (TR). In this paper, we explain why surges are natural sites to show enhanced emissivity in TR lines. We performed 2.5D radiative-MHD numerical experiments using the Bifrost code including the nonequilibrium ionization of silicon and oxygen. A surge is obtained as a by-product of magnetic flux emergence; the TR enveloping the emerged domain is strongly affected by nonequilibrium effects: assuming statistical equilibrium would produce an absence of Si IV and O IV ions in most of the region. Studying the properties of the surge plasma emitting in the Si IV 1402.77 Å and O IV 1401.16 Å lines, we find that a) the timescales for the optically-thin losses and heat conduction are very short, leading to departures from statistical equilibrium, and b) the surge emits in Si IV more and has an emissivity ratio of Si IV to O IV larger than a standard TR. Using synthetic spectra, we conclude the importance of line-of-sight effects: given the involved geometry of the surge, the line-of-sight can cut the emitting layer at small angles and/or cross it multiple times, causing prominent, spatially intermittent brightenings both in Si IV and O IV.

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arXiv2017

Surges and Si IV bursts in the solar atmosphere. Understanding IRIS and SST observations through RMHD experiments

Surges often appear as a result of the emergence of magnetized plasma from the solar interior. Traditionally, they are observed in chromospheric lines such as H$α$ 6563 Åand Ca II 8542 Å. However, whether there is a response to the surge appearance and evolution in the Si IV lines or, in fact, in many other transition region lines has not been studied. In this paper we analyze a simultaneous episode of an H$α$ surge and a Si IV burst that occurred on 2016 September 03 in active region AR12585. To that end, we use coordinated observations from the Interface Region Imaging Spectrograph (IRIS) and the Swedish 1-m Solar Telescope (SST). For the first time, we report emission of Si IV within the surge, finding profiles that are brighter and broader than the average. Furthermore, the brightest Si IV patches within the domain of the surge are located mainly near its footpoints. To understand the relation between the surges and the emission in transition region lines like Si IV, we have carried out 2.5D radiative MHD (RMHD) experiments of magnetic flux emergence episodes using the Bifrost code and including the non-equilibrium ionization of silicon. Through spectral synthesis we explain several features of the observations. We show that the presence of Si IV emission patches within the surge, their location near the surge footpoints and various observed spectral features are a natural consequence of the emergence of magnetized plasma from the interior to the atmosphere and the ensuing reconnection processes.

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arXiv2016

The cool surge following flux emergence in a radiation-MHD experiment

Cool and dense ejections, typically H$_α$ surges, often appear alongside EUV or X-Ray coronal jets as a result of the emergence of magnetized plasma from the solar interior. Idealized numerical experiments explain those ejections as being indirectly associated with the magnetic reconnection taking place between the emerging and preexisting systems. However, those experiments miss basic elements that can importantly affect the surge phenomenon. In this paper we study the cool surges using a realistic treatment of the radiation transfer and material plasma properties. To that end, the Bifrost code is used, which has advanced modules for the equation of state of the plasma, photospheric and chromospheric radiation transfer, heat conduction and optically thin radiative cooling. We carry out a 2.5D experiment of the emergence of magnetized plasma through (meso)granular convection cells and the low atmosphere to the corona. Through detailed Lagrange tracing, we study the formation and evolution of the cool ejection and, in particular, the role of the entropy sources: this allows us to discern families of evolutionary patterns for the plasma elements. In the launch phase many elements suffer accelerations well in excess of gravity; when nearing the apex of their individual trajectories, instead, the plasma elements follow quasi-parabolic trajectories with acceleration close to g$_{\odot^{}}$. We show how the formation of the cool ejection is mediated by a wedge-like structure composed of two shocks, one of which leads to the detachment of the surge from the original emerged plasma dome.

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arXiv2014

Prevalence of Small-scale Jets from the Networks of the Solar Transition Region and Chromosphere

As the interface between the Sun's photosphere and corona, the chromosphere and transition region play a key role in the formation and acceleration of the solar wind. Observations from the Interface Region Imaging Spectrograph reveal the prevalence of intermittent small-scale jets with speeds of 80-250 km/s from the narrow bright network lanes of this interface region. These jets have lifetimes of 20-80 seconds and widths of 300 km or less. They originate from small-scale bright regions, often preceded by footpoint brightenings and accompanied by transverse waves with ~20 km/s amplitudes. Many jets reach temperatures of at least ~100000 K and constitute an important element of the transition region structures. They are likely an intermittent but persistent source of mass and energy for the solar wind.

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arXiv2014

Hot Explosions in the Cool Atmosphere of the Sun

The solar atmosphere was traditionally represented with a simple one-dimensional model. Over the past few decades, this paradigm shifted for the chromosphere and corona that constitute the outer atmosphere, which is now considered a dynamic structured envelope. Recent observations by IRIS (Interface Region Imaging Spectrograph) reveal that it is difficult to determine what is up and down even in the cool 6000-K photosphere just above the solar surface: this region hosts pockets of hot plasma transiently heated to almost 100,000 K. The energy to heat and accelerate the plasma requires a considerable fraction of the energy from flares, the largest solar disruptions. These IRIS observations not only confirm that the photosphere is more complex than conventionally thought, but also provide insight into the energy conversion in the process of magnetic reconnection.

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arXiv2014

An Interface Region Imaging Spectrograph first view on Solar Spicules

Solar spicules have eluded modelers and observers for decades. Since the discovery of the more energetic type II, spicules have become a heated topic but their contribution to the energy balance of the low solar atmosphere remains unknown. Here we give a first glimpse of what quiet Sun spicules look like when observed with NASA's recently launched Interface Region Imaging Spectrograph (IRIS). Using IRIS spectra and filtergrams that sample the chromosphere and transition region we compare the properties and evolution of spicules as observed in a coordinated campaign with Hinode and the Atmospheric Imaging Assembly. Our IRIS observations allow us to follow the thermal evolution of type II spicules and finally confirm that the fading of Ca II H spicules appears to be caused by rapid heating to higher temperatures. The IRIS spicules do not fade but continue evolving, reaching higher and falling back down after 500-800 s. Ca II H type II spicules are thus the initial stages of violent and hotter events that mostly remain invisible in Ca II H filtergrams. These events have very different properties from type I spicules, which show lower velocities and no fading from chromospheric passbands. The IRIS spectra of spicules show the same signature as their proposed disk counterparts, reinforcing earlier work. Spectroheliograms from spectral rasters also confirm that quiet Sun spicules originate in bushes from the magnetic network. Our results suggest that type II spicules are indeed the site of vigorous heating (to at least transition region temperatures) along extensive parts of the upward moving spicular plasma.

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arXiv2014

Detection of supersonic downflows and associated heating events in the transition region above sunspots

IRIS data allow us to study the solar transition region (TR) with an unprecedented spatial resolution of 0.33 arcsec. On 2013 August 30, we observed bursts of high Doppler shifts suggesting strong supersonic downflows of up to 200 km/s and weaker, slightly slower upflows in the spectral lines Mg II h and k, C II 1336 Å, Si IV 1394 Å, and 1403 Å, that are correlated with brightenings in the slitjaw images (SJIs). The bursty behavior lasts throughout the 2 hr observation, with average burst durations of about 20 s. The locations of these short-lived events appear to be the umbral and penumbral footpoints of EUV loops. Fast apparent downflows are observed along these loops in the SJIs and in AIA, suggesting that the loops are thermally unstable. We interpret the observations as cool material falling from coronal heights, and especially coronal rain produced along the thermally unstable loops, which leads to an increase of intensity at the loop footpoints, probably indicating an increase of density and temperature in the TR. The rain speeds are on the higher end of previously reported speeds for this phenomenon, and possibly higher than the free-fall velocity along the loops. On other observing days, similar bright dots are sometimes aligned into ribbons, resembling small flare ribbons. These observations provide a first insight into small-scale heating events in sunspots in the TR.

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arXiv2014

High-resolution Observations of the Shock Wave Behavior for Sunspot Oscillations with the Interface Region Imaging Spectrograph

We present the first results of sunspot oscillations from observations by the Interface Region Imaging Spectrograph. The strongly nonlinear oscillation is identified in both the slit-jaw images and the spectra of several emission lines formed in the transition region and chromosphere. We first apply a single Gaussian fit to the profiles of the Mgii 2796.35 Å, Cii 1335.71 Å, and Si iv 1393.76 Å lines in the sunspot. The intensity change is about 30%. The Doppler shift oscillation reveals a sawtooth pattern with an amplitude of about 10 km/s in Si iv. In the umbra the Si iv oscillation lags those of Cii and Mgii by about 3 and 12 s, respectively. The line width suddenly increases as the Doppler shift changes from redshift to blueshift. However, we demonstrate that this increase is caused by the superposition of two emission components. We then perform detailed analysis of the line profiles at a few selected locations on the slit. The temporal evolution of the line core is dominated by the following behavior: a rapid excursion to the blue side, accompanied by an intensity increase, followed by a linear decrease of the velocity to the red side. The maximum intensity slightly lags the maximum blueshift in Si iv, whereas the intensity enhancement slightly precedes the maximum blueshift in Mgii. We find a positive correlation between the maximum velocity and deceleration, a result that is consistent with numerical simulations of upward propagating magnetoacoustic shock waves.

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